Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005667A_C01 KMC005667A_c01
(816 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_181056.1| unknown protein; protein id: At2g35110.1 [Arabi... 110 3e-23
ref|NP_010724.1| serine-threonine phosphatase Z; Ppz2p [Saccharo... 40 0.041
gb|AAA34899.1| type 1-related protein phosphatase 40 0.041
ref|NP_193735.1| DAG-like protein; protein id: At4g20020.1 [Arab... 38 0.16
gb|AAL85015.1| putative DAG protein [Arabidopsis thaliana] 38 0.16
>ref|NP_181056.1| unknown protein; protein id: At2g35110.1 [Arabidopsis thaliana]
gi|25408351|pir||G84764 hypothetical protein At2g35110
[imported] - Arabidopsis thaliana
gi|3668092|gb|AAC61824.1| unknown protein [Arabidopsis
thaliana]
Length = 1339
Score = 110 bits (274), Expect = 3e-23
Identities = 69/138 (50%), Positives = 85/138 (61%), Gaps = 23/138 (16%)
Frame = -3
Query: 814 TPSTPLAMLNASPRHSPAILLAHASPGLRHPRGDSTPPYYGN----------DSGYFKGG 665
TPSTPL+ ASP HSP++ L HASP +++ ST P G+ DSGYFKG
Sbjct: 1210 TPSTPLS--TASPYHSPSVSLIHASPSMKN----STTPQRGSGSGSSSTAAPDSGYFKGS 1263
Query: 664 SSS-HSQEHLYDADIGSIRN------------TRRSGPLDYSASRNRVKSVEGSTSGSTG 524
SSS + QEH +++ G+ RN +RRSGPLDYS+S GS S STG
Sbjct: 1264 SSSLYGQEHYTESETGNSRNNENNNNNKQRGSSRRSGPLDYSSSHKG-----GSGSNSTG 1318
Query: 523 PSPLPRFAVSRSGPLAYK 470
PSPLPRFAVSRSGP++YK
Sbjct: 1319 PSPLPRFAVSRSGPISYK 1336
>ref|NP_010724.1| serine-threonine phosphatase Z; Ppz2p [Saccharomyces cerevisiae]
gi|1346783|sp|P33329|PPZ2_YEAST SERINE/THREONINE PROTEIN
PHOSPHATASE PP-Z2 gi|422172|pir||S35674 phosphoprotein
phosphatase (EC 3.1.3.16) PPZ2 - yeast (Saccharomyces
cerevisiae) gi|403322|emb|CAA52233.1| serine/threonine
specific protein phosphatase [Saccharomyces cerevisiae]
gi|927693|gb|AAB64859.1| Ppz2p: serine/threonine protein
phosphatase; YDR436W; CAI: 0.11 [Saccharomyces
cerevisiae]
Length = 710
Score = 40.0 bits (92), Expect = 0.041
Identities = 34/120 (28%), Positives = 45/120 (37%), Gaps = 10/120 (8%)
Frame = -3
Query: 805 TPLAMLNASPRHSPAILLAHASPGLRHPRGDSTPPYY-------GNDSGYFKGGSSSHSQ 647
TPL N+ + S LR ++ P Y GN S YF S+SH+
Sbjct: 196 TPLRRHNSLQPEKGVTGFSSTSSKLRRRSDNTLPASYPLNAEAGGNGSDYFSNRSNSHAS 255
Query: 646 EHLYDADIGSIRNTRRSGPLDYSASR---NRVKSVEGSTSGSTGPSPLPRFAVSRSGPLA 476
+ GS NT S PL A R +R G G SP+P + + P A
Sbjct: 256 SR--KSSFGSTGNTAYSTPLHSPALRKMSSRDNDDSGDNVNGRGTSPIPNLNIDKPSPSA 313
>gb|AAA34899.1| type 1-related protein phosphatase
Length = 710
Score = 40.0 bits (92), Expect = 0.041
Identities = 34/120 (28%), Positives = 45/120 (37%), Gaps = 10/120 (8%)
Frame = -3
Query: 805 TPLAMLNASPRHSPAILLAHASPGLRHPRGDSTPPYY-------GNDSGYFKGGSSSHSQ 647
TPL N+ + S LR ++ P Y GN S YF S+SH+
Sbjct: 196 TPLRRHNSLQPEKGVTGFSSTSSKLRRRSDNTLPATYPLNAEAGGNGSDYFSNRSNSHAS 255
Query: 646 EHLYDADIGSIRNTRRSGPLDYSASR---NRVKSVEGSTSGSTGPSPLPRFAVSRSGPLA 476
+ GS NT S PL A R +R G G SP+P + + P A
Sbjct: 256 SR--KSSFGSTGNTAYSTPLHSPALRKMSSRDNDDSGDNVNGRGTSPIPNLNIDKPSPSA 313
>ref|NP_193735.1| DAG-like protein; protein id: At4g20020.1 [Arabidopsis thaliana]
gi|7484905|pir||T04886 DAG protein homolog F18F4.120 -
Arabidopsis thaliana gi|2827656|emb|CAA16610.1| DAG-like
protein [Arabidopsis thaliana]
gi|7268797|emb|CAB79002.1| DAG-like protein [Arabidopsis
thaliana] gi|27754272|gb|AAO22589.1| putative DAG
protein [Arabidopsis thaliana]
Length = 419
Score = 38.1 bits (87), Expect = 0.16
Identities = 26/88 (29%), Positives = 38/88 (42%), Gaps = 3/88 (3%)
Frame = -3
Query: 736 GLRHPRGDSTPPYYGNDSGYFKGGSSSHSQEHLYDADIGSIRNTRRSGPLDYSASRNRVK 557
G +G PPY G S Y +GGS ++SQ + G RN G ++ +
Sbjct: 290 GYNQVQGSPVPPYQGTQSSYGQGGSGNYSQGPQGGYNQGGPRNYNPQGAGNFGPA----- 344
Query: 556 SVEGSTSGSTGPSP---LPRFAVSRSGP 482
S +G+ GP+P P + SGP
Sbjct: 345 ----SGAGNLGPAPGAGNPGYGQGYSGP 368
>gb|AAL85015.1| putative DAG protein [Arabidopsis thaliana]
Length = 178
Score = 38.1 bits (87), Expect = 0.16
Identities = 26/88 (29%), Positives = 38/88 (42%), Gaps = 3/88 (3%)
Frame = -3
Query: 736 GLRHPRGDSTPPYYGNDSGYFKGGSSSHSQEHLYDADIGSIRNTRRSGPLDYSASRNRVK 557
G +G PPY G S Y +GGS ++SQ + G RN G ++ +
Sbjct: 62 GYNQVQGSPVPPYQGTQSSYGQGGSGNYSQGPQGGYNQGGPRNYNPQGAGNFGPA----- 116
Query: 556 SVEGSTSGSTGPSP---LPRFAVSRSGP 482
S +G+ GP+P P + SGP
Sbjct: 117 ----SGAGNLGPAPGAGNPGYGQGYSGP 140
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 676,355,828
Number of Sequences: 1393205
Number of extensions: 14443930
Number of successful extensions: 32920
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 31241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32851
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 42016716300
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
