Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005666A_C01 KMC005666A_c01
(530 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195948.1| putative protein; protein id: At5g03280.1, supp... 118 4e-26
gb|AAL83627.1|AC093017_11 putative manganese transport protein [... 94 8e-19
ref|NP_542625.1| ORF2 [Helicoverpa zea single nucleocapsid nucle... 35 0.55
gb|EAA41340.1| GLP_163_66813_68537 [Giardia lamblia ATCC 50803] 35 0.55
ref|NP_075071.1| unknown [Heliocoverpa armigera nucleopolyhedrov... 35 0.55
>ref|NP_195948.1| putative protein; protein id: At5g03280.1, supported by cDNA:
gi_5231114 [Arabidopsis thaliana] gi|11357278|pir||T48349
EIN2 protein - Arabidopsis thaliana
gi|5231113|gb|AAD41076.1|AF141202_1 EIN2 [Arabidopsis
thaliana] gi|5231115|gb|AAD41077.1|AF141203_1 EIN2
[Arabidopsis thaliana] gi|7378608|emb|CAB83284.1| EIN2
[Arabidopsis thaliana] gi|9757779|dbj|BAB08388.1| EIN2
[Arabidopsis thaliana]
Length = 1294
Score = 118 bits (296), Expect = 4e-26
Identities = 63/85 (74%), Positives = 70/85 (82%), Gaps = 3/85 (3%)
Frame = -2
Query: 484 LPPTAKPGRGQCTTPSTLLELIQDVEVAISSRKGRTGTAAGDVAFPKGKENLASVLKRYK 305
LPP AKP +G+CTT TLL+LI+DVE+AIS RKGRTGTAAGDVAFPKGKENLASVLKRYK
Sbjct: 1207 LPPAAKPAKGKCTTAVTLLDLIKDVEMAISCRKGRTGTAAGDVAFPKGKENLASVLKRYK 1266
Query: 304 RRLSSINKPAG---EGSGLRKMTSA 239
RRLS NKP G +G G RK +A
Sbjct: 1267 RRLS--NKPVGMNQDGPGSRKNVTA 1289
>gb|AAL83627.1|AC093017_11 putative manganese transport protein [Oryza sativa (japonica
cultivar-group)]
Length = 1202
Score = 94.4 bits (233), Expect = 8e-19
Identities = 49/65 (75%), Positives = 54/65 (82%)
Frame = -2
Query: 484 LPPTAKPGRGQCTTPSTLLELIQDVEVAISSRKGRTGTAAGDVAFPKGKENLASVLKRYK 305
L AKP G TT +LE+I+DVE AISSRKGR+GTAAGDVAFPKGKENLASVLKRYK
Sbjct: 1132 LQKVAKPISGTFTTAGMILEMIKDVEQAISSRKGRSGTAAGDVAFPKGKENLASVLKRYK 1191
Query: 304 RRLSS 290
RRLS+
Sbjct: 1192 RRLSN 1196
>ref|NP_542625.1| ORF2 [Helicoverpa zea single nucleocapsid nucleopolyhedrovirus]
gi|18028711|gb|AAL56147.1|AF334030_72 ORF2 [Helicoverpa
zea single nucleocapsid nucleopolyhedrovirus]
Length = 413
Score = 35.0 bits (79), Expect = 0.55
Identities = 30/102 (29%), Positives = 44/102 (42%), Gaps = 8/102 (7%)
Frame = -2
Query: 514 LQPKSSPPPSLPPTAKPGRGQCTT--------PSTLLELIQDVEVAISSRKGRTGTAAGD 359
L P PPP PP P +T P L LI+D+ + S + T T+
Sbjct: 132 LMPPPIPPPIPPPPPPPQTNLSSTIPPPPPPPPPPSLPLIEDIVIPSSKDRDYT-TSTRQ 190
Query: 358 VAFPKGKENLASVLKRYKRRLSSINKPAGEGSGLRKMTSASS 233
V E + + K K L ++KPA GS + +T+A+S
Sbjct: 191 VLKDPRTELMEQIQKGIK--LKKVSKPADGGSIVNTVTAAAS 230
>gb|EAA41340.1| GLP_163_66813_68537 [Giardia lamblia ATCC 50803]
Length = 574
Score = 35.0 bits (79), Expect = 0.55
Identities = 21/68 (30%), Positives = 33/68 (47%)
Frame = -2
Query: 433 LLELIQDVEVAISSRKGRTGTAAGDVAFPKGKENLASVLKRYKRRLSSINKPAGEGSGLR 254
L+E + ++VA SR +G A A G AS+LK + +S N P +G+G
Sbjct: 404 LIEREKQLQVAYDSRNALSGFTALMAAASNGSYKTASLLKEVEADMSIKNTPVTDGAGTT 463
Query: 253 KMTSASSY 230
+ A+ Y
Sbjct: 464 ALMLAAQY 471
>ref|NP_075071.1| unknown [Heliocoverpa armigera nucleopolyhedrovirus G4]
gi|12483753|gb|AAG53745.1|AF271059_2 unknown
[Heliocoverpa armigera nucleopolyhedrovirus G4]
Length = 413
Score = 35.0 bits (79), Expect = 0.55
Identities = 30/102 (29%), Positives = 44/102 (42%), Gaps = 8/102 (7%)
Frame = -2
Query: 514 LQPKSSPPPSLPPTAKPGRGQCTT--------PSTLLELIQDVEVAISSRKGRTGTAAGD 359
L P PPP PP P +T P L LI+D+ + S + T T+
Sbjct: 132 LMPPPIPPPIPPPPPPPQTNLSSTIPPPPPPPPPPSLPLIEDIVIPSSKDRDYT-TSTRQ 190
Query: 358 VAFPKGKENLASVLKRYKRRLSSINKPAGEGSGLRKMTSASS 233
V E + + K K L ++KPA GS + +T+A+S
Sbjct: 191 VLKDPRTELMEQIQKGIK--LKKVSKPADGGSIVNTVTAAAS 230
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 488,260,990
Number of Sequences: 1393205
Number of extensions: 11122286
Number of successful extensions: 46306
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 38107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45458
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
