Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005663A_C01 KMC005663A_c01
(866 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_178144.1| unknown protein; protein id: At1g80280.1, suppo... 239 4e-62
ref|NP_173002.1| unknown protein; protein id: At1g15490.1, suppo... 237 1e-61
pir||E96568 unknown protein, 18223-15857 [imported] - Arabidopsi... 164 2e-39
dbj|BAC00606.1| OJ1316_H05.1 [Oryza sativa (japonica cultivar-gr... 157 2e-37
ref|NP_671945.1| unknown protein; protein id: At2g40095.1 [Arabi... 106 5e-22
>ref|NP_178144.1| unknown protein; protein id: At1g80280.1, supported by cDNA:
gi_20466449 [Arabidopsis thaliana]
gi|25406649|pir||C96834 unknown protein F5I6.3
[imported] - Arabidopsis thaliana
gi|12324976|gb|AAG52432.1|AC018848_3 unknown protein;
13661-11359 [Arabidopsis thaliana]
gi|20466450|gb|AAM20542.1| unknown protein [Arabidopsis
thaliana] gi|23198130|gb|AAN15592.1| unknown protein
[Arabidopsis thaliana]
Length = 647
Score = 239 bits (610), Expect = 4e-62
Identities = 119/164 (72%), Positives = 138/164 (83%)
Frame = +3
Query: 342 EKLRRCARTVFFVAAWVASLLVTSLPVLVAAVDVLVPCV*ISSFTCVRCYGFKEHLRRYD 521
EK RRC RTVFF+ A + SLLV+SLPVLVA DVLVP +SSFTC+ CYGFKEHL RY
Sbjct: 9 EKARRCLRTVFFMVAMLVSLLVSSLPVLVAIGDVLVPTFLLSSFTCLTCYGFKEHLSRYA 68
Query: 522 FKSSLTDIPLVSVIRSLIIICVYSICDGPALSHGPYLGTVTVCSFVSIAVLSVKACVSTV 701
FKSSLTDIPLVS++RS ++ICVYS+ D PALSHGPYLGTV++CS VS+ +LSVKACV T
Sbjct: 69 FKSSLTDIPLVSLVRSFLVICVYSLSDAPALSHGPYLGTVSLCSVVSVVLLSVKACVFTA 128
Query: 702 NSQIEAEASVSITRKILRLKKSWGMPVLFLSSVVFALGHIVVAY 833
NSQ+ +AS S +R+ L LKKSWGMPVLFLSSVVFALGH+VVAY
Sbjct: 129 NSQLNDQASSSPSRQRLHLKKSWGMPVLFLSSVVFALGHMVVAY 172
>ref|NP_173002.1| unknown protein; protein id: At1g15490.1, supported by cDNA:
gi_17529297 [Arabidopsis thaliana]
gi|5103847|gb|AAD39677.1|AC007591_42 Contains PF|00561
alpha/beta hydrolase fold. [Arabidopsis thaliana]
gi|17529298|gb|AAL38876.1| unknown protein [Arabidopsis
thaliana] gi|26983890|gb|AAN86197.1| unknown protein
[Arabidopsis thaliana]
Length = 648
Score = 237 bits (605), Expect = 1e-61
Identities = 119/164 (72%), Positives = 137/164 (82%)
Frame = +3
Query: 342 EKLRRCARTVFFVAAWVASLLVTSLPVLVAAVDVLVPCV*ISSFTCVRCYGFKEHLRRYD 521
EK RRC RTVFF+ A +ASLLV+SLP+LVA DVLVP +SSFTCV CYG KEHLRRY
Sbjct: 9 EKARRCLRTVFFMVAMLASLLVSSLPLLVAIGDVLVPSFLLSSFTCVTCYGAKEHLRRYG 68
Query: 522 FKSSLTDIPLVSVIRSLIIICVYSICDGPALSHGPYLGTVTVCSFVSIAVLSVKACVSTV 701
FK SLTDIP+VSV+RS ++IC+Y + D PALSHGPYLGTV++CS VS+ +LSVKAC+ TV
Sbjct: 69 FKRSLTDIPIVSVVRSFLVICIYLLSDVPALSHGPYLGTVSLCSVVSVLLLSVKACLFTV 128
Query: 702 NSQIEAEASVSITRKILRLKKSWGMPVLFLSSVVFALGHIVVAY 833
NSQ+ EAS S +RK L LKKSWGMPVLFLSSVVFALGH VVAY
Sbjct: 129 NSQLNNEASFSPSRKRLHLKKSWGMPVLFLSSVVFALGHTVVAY 172
>pir||E96568 unknown protein, 18223-15857 [imported] - Arabidopsis thaliana
gi|12324631|gb|AAG52267.1|AC019018_4 unknown protein;
18223-15857 [Arabidopsis thaliana]
Length = 614
Score = 164 bits (415), Expect = 2e-39
Identities = 84/155 (54%), Positives = 108/155 (69%)
Frame = +3
Query: 369 VFFVAAWVASLLVTSLPVLVAAVDVLVPCV*ISSFTCVRCYGFKEHLRRYDFKSSLTDIP 548
+FFVAA ASLL +SLPVL+ DV+VPC+ +SS TC+ C+ +H R+Y FK+SL D+P
Sbjct: 1 MFFVAAMTASLLASSLPVLITVADVVVPCLIVSSITCLTCHSPAQHFRQYSFKTSLIDVP 60
Query: 549 LVSVIRSLIIICVYSICDGPALSHGPYLGTVTVCSFVSIAVLSVKACVSTVNSQIEAEAS 728
LVS+IRSL+IIC+ +C+ L++G YL TV + SF I +L VK CV TVNS +E
Sbjct: 61 LVSLIRSLVIICLSWLCEDTRLAYGLYLETVMLSSFGGILLLLVKTCVFTVNSTLE---- 116
Query: 729 VSITRKILRLKKSWGMPVLFLSSVVFALGHIVVAY 833
K+ LK SWGMPVL LSS VF L H+VVAY
Sbjct: 117 ---EAKVYHLKISWGMPVLLLSSAVFGLAHVVVAY 148
>dbj|BAC00606.1| OJ1316_H05.1 [Oryza sativa (japonica cultivar-group)]
gi|21901991|dbj|BAC05542.1| P0038D11.18 [Oryza sativa
(japonica cultivar-group)]
Length = 629
Score = 157 bits (397), Expect = 2e-37
Identities = 84/152 (55%), Positives = 102/152 (66%)
Frame = +3
Query: 378 VAAWVASLLVTSLPVLVAAVDVLVPCV*ISSFTCVRCYGFKEHLRRYDFKSSLTDIPLVS 557
+ A VASLL+ S P LVAA DV V C+RC+G + HL RY F+SSL DIPLVS
Sbjct: 1 MVAMVASLLMASAPALVAAGDVAVALWLEVRLGCLRCHGLRGHLERYGFRSSLVDIPLVS 60
Query: 558 VIRSLIIICVYSICDGPALSHGPYLGTVTVCSFVSIAVLSVKACVSTVNSQIEAEASVSI 737
+ RS++I CVY + D LSHGPYLGT T CS S+ +L +KA V + +I E S S+
Sbjct: 61 IARSVVITCVYLMSDASGLSHGPYLGTATCCSLASLLILLIKASVYSPAQEIGPELSPSL 120
Query: 738 TRKILRLKKSWGMPVLFLSSVVFALGHIVVAY 833
L LKK GMPVLFLSS+VFALGH+VVAY
Sbjct: 121 ADHKLSLKKLSGMPVLFLSSLVFALGHVVVAY 152
>ref|NP_671945.1| unknown protein; protein id: At2g40095.1 [Arabidopsis thaliana]
Length = 189
Score = 106 bits (264), Expect = 5e-22
Identities = 63/165 (38%), Positives = 86/165 (51%)
Frame = +3
Query: 339 FEKLRRCARTVFFVAAWVASLLVTSLPVLVAAVDVLVPCV*ISSFTCVRCYGFKEHLRRY 518
+ L R +T+F + S L+ S P+ +A D L+P + F+ HL Y
Sbjct: 15 WSSLWRGIKTIFVLFTMFFSFLLVSAPIFLAVADALLPSALLHRFSSPAT--LSSHLTNY 72
Query: 519 DFKSSLTDIPLVSVIRSLIIICVYSICDGPALSHGPYLGTVTVCSFVSIAVLSVKACVST 698
DF+ SL DIPL+S+IRS +I+CVY +CDGP LS GPYL +CS S+ +S+KA
Sbjct: 73 DFRHSLIDIPLISIIRSAVILCVYGLCDGPKLSRGPYLTITMICSISSLIYVSLKAAFVF 132
Query: 699 VNSQIEAEASVSITRKILRLKKSWGMPVLFLSSVVFALGHIVVAY 833
I + + R LFL S V A+GHIVVAY
Sbjct: 133 GEPAI-GDGGGNYFRA--------AEVALFLCSSVLAIGHIVVAY 168
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 830,737,411
Number of Sequences: 1393205
Number of extensions: 21018589
Number of successful extensions: 95626
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 72759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92684
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 46267227342
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
