Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005655A_C01 KMC005655A_c01
(536 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO49473.1| putative serine/threonine kinase [Vitis vinifera] 166 2e-40
gb|AAF19542.1|AC007190_10 F23N19.18 [Arabidopsis thaliana] 158 3e-38
ref|NP_172695.1| putative serine/threonine kinase; protein id: A... 155 2e-37
ref|NP_176470.1| calmodulin, putative; protein id: At1g62820.1, ... 155 2e-37
pir||A86258 protein F5O11.4 [imported] - Arabidopsis thaliana gi... 154 8e-37
>gb|AAO49473.1| putative serine/threonine kinase [Vitis vinifera]
Length = 147
Score = 166 bits (420), Expect = 2e-40
Identities = 78/88 (88%), Positives = 86/88 (97%)
Frame = -1
Query: 536 SPFDFPRFLDLMAQHMQPEPFDRQLRDAFKVIDKDSTGFVSVTELGHILTSIGEKLEPAE 357
+PFDFPRFLDLM++HM+PEPFDRQLRDAFKV+DK+STGFVSV +L HILTSIGEKLEPAE
Sbjct: 60 TPFDFPRFLDLMSKHMKPEPFDRQLRDAFKVLDKESTGFVSVADLRHILTSIGEKLEPAE 119
Query: 356 FDEWIREVDVGSDGKIRYEDFIARMVAK 273
FDEWIREVDVGSDGKIRYEDFI+RMVAK
Sbjct: 120 FDEWIREVDVGSDGKIRYEDFISRMVAK 147
>gb|AAF19542.1|AC007190_10 F23N19.18 [Arabidopsis thaliana]
Length = 1794
Score = 158 bits (400), Expect = 3e-38
Identities = 75/93 (80%), Positives = 86/93 (91%)
Frame = -1
Query: 536 SPFDFPRFLDLMAQHMQPEPFDRQLRDAFKVIDKDSTGFVSVTELGHILTSIGEKLEPAE 357
SPFDF RFLDLMA+H++ EPFDRQLRDAFKV+DK+ TGFV+V +L HILTSIGEKL+P+E
Sbjct: 932 SPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLQPSE 991
Query: 356 FDEWIREVDVGSDGKIRYEDFIARMVAK*LLLF 258
FDEWI+EVDVGSDGKIRYEDFIARMVA LL+F
Sbjct: 992 FDEWIKEVDVGSDGKIRYEDFIARMVANFLLIF 1024
>ref|NP_172695.1| putative serine/threonine kinase; protein id: At1g12310.1,
supported by cDNA: gi_15010571, supported by cDNA:
gi_20334851 [Arabidopsis thaliana]
gi|15010572|gb|AAK73945.1| At1g12310/F5O11_2
[Arabidopsis thaliana] gi|20334852|gb|AAM16182.1|
At1g12310/F5O11_2 [Arabidopsis thaliana]
Length = 148
Score = 155 bits (393), Expect = 2e-37
Identities = 74/88 (84%), Positives = 82/88 (93%)
Frame = -1
Query: 536 SPFDFPRFLDLMAQHMQPEPFDRQLRDAFKVIDKDSTGFVSVTELGHILTSIGEKLEPAE 357
SPFDF RFLDLMA+H++ EPFDRQLRDAFKV+DK+ TGFV+V +L HILTSIGEKLEP E
Sbjct: 61 SPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLEPNE 120
Query: 356 FDEWIREVDVGSDGKIRYEDFIARMVAK 273
FDEWI+EVDVGSDGKIRYEDFIARMVAK
Sbjct: 121 FDEWIKEVDVGSDGKIRYEDFIARMVAK 148
>ref|NP_176470.1| calmodulin, putative; protein id: At1g62820.1, supported by cDNA:
gi_17529027 [Arabidopsis thaliana]
gi|17529028|gb|AAL38724.1| putative calmodulin protein
[Arabidopsis thaliana]
Length = 148
Score = 155 bits (393), Expect = 2e-37
Identities = 73/88 (82%), Positives = 83/88 (93%)
Frame = -1
Query: 536 SPFDFPRFLDLMAQHMQPEPFDRQLRDAFKVIDKDSTGFVSVTELGHILTSIGEKLEPAE 357
SPFDF RFLDLMA+H++ EPFDRQLRDAFKV+DK+ TGFV+V +L HILTSIGEKL+P+E
Sbjct: 61 SPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLQPSE 120
Query: 356 FDEWIREVDVGSDGKIRYEDFIARMVAK 273
FDEWI+EVDVGSDGKIRYEDFIARMVAK
Sbjct: 121 FDEWIKEVDVGSDGKIRYEDFIARMVAK 148
>pir||A86258 protein F5O11.4 [imported] - Arabidopsis thaliana
gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4
[Arabidopsis thaliana]
Length = 975
Score = 154 bits (388), Expect = 8e-37
Identities = 73/87 (83%), Positives = 81/87 (92%)
Frame = -1
Query: 536 SPFDFPRFLDLMAQHMQPEPFDRQLRDAFKVIDKDSTGFVSVTELGHILTSIGEKLEPAE 357
SPFDF RFLDLMA+H++ EPFDRQLRDAFKV+DK+ TGFV+V +L HILTSIGEKLEP E
Sbjct: 61 SPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLEPNE 120
Query: 356 FDEWIREVDVGSDGKIRYEDFIARMVA 276
FDEWI+EVDVGSDGKIRYEDFIARMVA
Sbjct: 121 FDEWIKEVDVGSDGKIRYEDFIARMVA 147
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 453,728,020
Number of Sequences: 1393205
Number of extensions: 9821636
Number of successful extensions: 62591
Number of sequences better than 10.0: 1623
Number of HSP's better than 10.0 without gapping: 49527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60698
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18173652336
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
