Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005651A_C01 KMC005651A_c01
(557 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA05267.1| Hcr9-4C [Lycopersicon hirsutum] 137 9e-32
pir||T17462 disease resistance E - tomato gi|4235643|gb|AAD13303... 135 3e-31
pir||T17461 disease resistance protein D - tomato gi|4235641|gb|... 135 3e-31
gb|AAK97628.1|AF401036_1 receptor-like protein 9DC [Lycopersicon... 135 4e-31
emb|CAA05275.1| Hcr9-9D [Lycopersicon pimpinellifolium] 135 4e-31
>emb|CAA05267.1| Hcr9-4C [Lycopersicon hirsutum]
Length = 862
Score = 137 bits (345), Expect = 9e-32
Identities = 75/141 (53%), Positives = 93/141 (65%), Gaps = 9/141 (6%)
Frame = +1
Query: 115 CHEDDSHALLQFKEGFAISKLASE---------NPLSYPKVASWNASTDCCSSWDGIQCD 267
C ED + ALLQFK F ++ S+ + SYP+ SWN T CCS WDG+ CD
Sbjct: 28 CPEDQALALLQFKNMFTVNPNDSDYCYDISTGVDIQSYPRTLSWNNRTSCCS-WDGVHCD 86
Query: 268 EHTGHVIGIDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEFSKLTHL 447
E TG VI +DLS SQL G SNSSLF L+ L+ LDL+ N+F S I SR+GEFS LTHL
Sbjct: 87 ETTGQVIELDLSCSQLQGKFHSNSSLFQLSNLKRLDLSFNNFTGSLISSRLGEFSSLTHL 146
Query: 448 NLSLTSFSGEVPQEVSH*SKL 510
+LS +SF+G +P E+SH SKL
Sbjct: 147 DLSHSSFTGLIPSEISHLSKL 167
Score = 35.4 bits (80), Expect = 0.48
Identities = 28/76 (36%), Positives = 41/76 (53%)
Frame = +1
Query: 292 IDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEFSKLTHLNLSLTSFS 471
+D SS+ L G + SN S L L+ L L+ N+ N S IPS I L L+L +FS
Sbjct: 367 LDFSSNSLTGPIPSNVS--GLQNLEWLYLSSNNLNGS-IPSWIFSLPSLIELDLRNNTFS 423
Query: 472 GEVPQEVSH*SKLLSL 519
G++ + S ++SL
Sbjct: 424 GKIQEFKSKTLSVVSL 439
Score = 35.0 bits (79), Expect = 0.62
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +1
Query: 367 ILDLADNDFNYSQIPSRIGEFSKLTHLNLSLTSFSGEVPQEVSH*SKLLSLDL 525
I++L+ N F +IPS IG+ L LNLS + G +P + S L SLDL
Sbjct: 671 IINLSKNRFE-GRIPSIIGDLVGLRTLNLSHNALEGHIPASFQNLSVLESLDL 722
Score = 33.5 bits (75), Expect = 1.8
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 292 IDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEFSKLTHLNLSLTSFS 471
+ L ++ G L+ S + QL+ LD + N IPS + L L LS + +
Sbjct: 341 LSLRNNNFDGGLEFLSFNRSWTQLEWLDFSSNSLT-GPIPSNVSGLQNLEWLYLSSNNLN 399
Query: 472 GEVPQEVSH*SKLLSLDLR 528
G +P + L+ LDLR
Sbjct: 400 GSIPSWIFSLPSLIELDLR 418
Score = 33.1 bits (74), Expect = 2.4
Identities = 23/73 (31%), Positives = 41/73 (55%), Gaps = 3/73 (4%)
Frame = +1
Query: 277 GHVIGI---DLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEFSKLTHL 447
G ++G+ +LS + L G++ + S NL+ L+ LDL+ N + +IP ++ + L L
Sbjct: 688 GDLVGLRTLNLSHNALEGHIPA--SFQNLSVLESLDLSSNKIS-GEIPQQLASLTFLEFL 744
Query: 448 NLSLTSFSGEVPQ 486
NLS G +P+
Sbjct: 745 NLSHNHLVGCIPK 757
Score = 32.7 bits (73), Expect = 3.1
Identities = 25/78 (32%), Positives = 42/78 (53%)
Frame = +1
Query: 292 IDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEFSKLTHLNLSLTSFS 471
I+LS ++ G + S + +L L+ L+L+ N IP+ S L L+LS S
Sbjct: 672 INLSKNRFEGRIPS--IIGDLVGLRTLNLSHNALE-GHIPASFQNLSVLESLDLSSNKIS 728
Query: 472 GEVPQEVSH*SKLLSLDL 525
GE+PQ+++ + L L+L
Sbjct: 729 GEIPQQLASLTFLEFLNL 746
>pir||T17462 disease resistance E - tomato gi|4235643|gb|AAD13303.1| NL0E
[Lycopersicon esculentum]
Length = 768
Score = 135 bits (341), Expect = 3e-31
Identities = 76/147 (51%), Positives = 96/147 (64%), Gaps = 9/147 (6%)
Frame = +1
Query: 97 SFSQGQCHEDDSHALLQFKEGFAISKLAS---------ENPLSYPKVASWNASTDCCSSW 249
S S C +D++ ALLQFK F ++ AS EN SYP+ SWN S DCCS W
Sbjct: 22 SSSPHLCPKDEALALLQFKHMFTVNPNASDYCYDITDQENIQSYPRTLSWNNSIDCCS-W 80
Query: 250 DGIQCDEHTGHVIGIDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEF 429
+G+ CDE TG VI +DL SQL G SNSSLF+L+ L+ LDLA N+F+ S I + GEF
Sbjct: 81 NGVHCDETTGQVIELDLRCSQLQGKFHSNSSLFHLSNLKSLDLAYNNFSGSLISPKFGEF 140
Query: 430 SKLTHLNLSLTSFSGEVPQEVSH*SKL 510
S L HL+LS +SF+G +P E+SH SKL
Sbjct: 141 SGLAHLDLSHSSFTGLIPAEISHLSKL 167
Score = 35.8 bits (81), Expect = 0.37
Identities = 30/79 (37%), Positives = 37/79 (45%)
Frame = +1
Query: 289 GIDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEFSKLTHLNLSLTSF 468
G D S Q+ LDSN I+DL+ N F IP IG+ L LNLS
Sbjct: 561 GQDYDSVQI---LDSN---------MIIDLSKNRFE-GHIPGIIGDLVGLRTLNLSHNVL 607
Query: 469 SGEVPQEVSH*SKLLSLDL 525
G +P + + S L SLDL
Sbjct: 608 EGHIPTSLQNLSVLESLDL 626
Score = 33.1 bits (74), Expect = 2.4
Identities = 24/78 (30%), Positives = 42/78 (53%)
Frame = +1
Query: 292 IDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEFSKLTHLNLSLTSFS 471
IDLS ++ G++ + +L L+ L+L+ N IP+ + S L L+LS S
Sbjct: 576 IDLSKNRFEGHIPG--IIGDLVGLRTLNLSHNVLE-GHIPTSLQNLSVLESLDLSSNKIS 632
Query: 472 GEVPQEVSH*SKLLSLDL 525
GE+P+++ + L L+L
Sbjct: 633 GEIPKQLESLTFLEVLNL 650
Score = 33.1 bits (74), Expect = 2.4
Identities = 22/85 (25%), Positives = 39/85 (45%)
Frame = +1
Query: 271 HTGHVIGIDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEFSKLTHLN 450
H ++ + LS + +G L+ S + +L++LD + N +PS + L L+
Sbjct: 237 HLSNLETLILSYNNFHGQLEFLSFNRSWTRLELLDFSSNSLT-GPVPSNVSGLQNLLWLS 295
Query: 451 LSLTSFSGEVPQEVSH*SKLLSLDL 525
LS +G +P + L LDL
Sbjct: 296 LSSNHLNGTIPSWIFSLPSLKVLDL 320
Score = 32.3 bits (72), Expect = 4.0
Identities = 23/65 (35%), Positives = 34/65 (51%)
Frame = +1
Query: 292 IDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEFSKLTHLNLSLTSFS 471
+ L +QL G + + SL N L+IL L+ N+ + QI S I + L LNL +
Sbjct: 340 VTLKENQLEGPIPN--SLLNTPSLRILLLSHNNIS-GQIASTICNLTALNVLNLRSNNLE 396
Query: 472 GEVPQ 486
G +PQ
Sbjct: 397 GTIPQ 401
Score = 31.6 bits (70), Expect = 6.9
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 280 HVIGIDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEFSKLTHLNLSL 459
H+ L S++ +G + S+ + AQLQILDL+ N F+ + S G + ++ S
Sbjct: 479 HLQIFSLRSNKFHGPIKSSGNTNLFAQLQILDLSSNGFSGNLPISLFGNLQAMKKIDEST 538
Query: 460 T 462
T
Sbjct: 539 T 539
>pir||T17461 disease resistance protein D - tomato gi|4235641|gb|AAD13301.1|
NL0D [Lycopersicon esculentum]
Length = 853
Score = 135 bits (340), Expect = 3e-31
Identities = 79/155 (50%), Positives = 96/155 (60%), Gaps = 1/155 (0%)
Frame = +1
Query: 58 FSLLSHSY*SVFLSFSQGQCHEDDSHALLQFKEGFAISKLASEN-PLSYPKVASWNASTD 234
F L S F S S C + + ALLQFK F ++ AS S+PK SWN STD
Sbjct: 9 FMLYSFLCQLAFSSSSSHLCPKYQALALLQFKNMFTVNPDASYYCEFSHPKTRSWNKSTD 68
Query: 235 CCSSWDGIQCDEHTGHVIGIDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPS 414
CCS WDG+ CD TG VI +DL SQL G L SNSSLF L+ L+ LDL+ NDF S I
Sbjct: 69 CCS-WDGVHCDNTTGQVIELDLRCSQLQGKLHSNSSLFQLSNLKRLDLSYNDFTGSPISP 127
Query: 415 RIGEFSKLTHLNLSLTSFSGEVPQEVSH*SKLLSL 519
+ GEFS LTHL+L ++F+G +P E+SH SKL L
Sbjct: 128 KFGEFSNLTHLDLFDSNFTGIIPSEISHLSKLYVL 162
Score = 35.8 bits (81), Expect = 0.37
Identities = 30/77 (38%), Positives = 40/77 (50%)
Frame = +1
Query: 292 IDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEFSKLTHLNLSLTSFS 471
+D SS+ L G + SN S L LQ L L+ N N IPS I LT LNLS + S
Sbjct: 361 LDFSSNFLTGPIPSNVS--GLQNLQQLILSSNHLN-GTIPSWIFSLPSLTVLNLSDNTLS 417
Query: 472 GEVPQEVSH*SKLLSLD 522
G++ + S +SL+
Sbjct: 418 GKIQEFKSKTLYFVSLE 434
Score = 34.7 bits (78), Expect = 0.81
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1
Query: 367 ILDLADNDFNYSQIPSRIGEFSKLTHLNLSLTSFSGEVPQEVSH*SKLLSLDL 525
I+DL+ N F IP+ IG+ L LNLS G +P + S L SLDL
Sbjct: 665 IIDLSKNKFE-GHIPNIIGDLIGLRTLNLSHNVLEGHIPASFQNLSVLESLDL 716
Score = 32.0 bits (71), Expect = 5.3
Identities = 24/78 (30%), Positives = 42/78 (53%)
Frame = +1
Query: 292 IDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEFSKLTHLNLSLTSFS 471
IDLS ++ G++ + + +L L+ L+L+ N IP+ S L L+LS S
Sbjct: 666 IDLSKNKFEGHIPN--IIGDLIGLRTLNLSHNVLE-GHIPASFQNLSVLESLDLSSNKIS 722
Query: 472 GEVPQEVSH*SKLLSLDL 525
G +PQ+++ + L L+L
Sbjct: 723 GAIPQQLASLTFLEVLNL 740
>gb|AAK97628.1|AF401036_1 receptor-like protein 9DC [Lycopersicon pimpinellifolium]
Length = 863
Score = 135 bits (339), Expect = 4e-31
Identities = 72/140 (51%), Positives = 90/140 (63%), Gaps = 8/140 (5%)
Frame = +1
Query: 115 CHEDDSHALLQFKEGFAISK--------LASENPLSYPKVASWNASTDCCSSWDGIQCDE 270
C ED + ALLQFK F ++ + SYP+ SWN ST CCS WDG+ CDE
Sbjct: 28 CPEDQALALLQFKNMFTVNPNAFHYCPDITGREIQSYPRTLSWNKSTSCCS-WDGVHCDE 86
Query: 271 HTGHVIGIDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEFSKLTHLN 450
TG VI +DL SQL G SNSSLF L+ L+ LDL++N+F S I + GEFS LTHL+
Sbjct: 87 TTGQVIALDLRCSQLQGKFHSNSSLFQLSNLKRLDLSNNNFIGSLISPKFGEFSDLTHLD 146
Query: 451 LSLTSFSGEVPQEVSH*SKL 510
LS +SF+G +P E+SH SKL
Sbjct: 147 LSDSSFTGVIPSEISHLSKL 166
Score = 38.5 bits (88), Expect = 0.056
Identities = 27/65 (41%), Positives = 37/65 (56%)
Frame = +1
Query: 292 IDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEFSKLTHLNLSLTSFS 471
+DLSS+ L G + SN S L L+ L L+ N N S IPS I L L+LS +FS
Sbjct: 364 LDLSSNSLTGPIPSNIS--GLQNLECLYLSSNHLNGS-IPSWIFSLPSLVELDLSNNTFS 420
Query: 472 GEVPQ 486
G++ +
Sbjct: 421 GKIQE 425
Score = 35.4 bits (80), Expect = 0.48
Identities = 33/96 (34%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Frame = +1
Query: 259 QCDEHTGHVIGIDLSSSQLYGYLDSNS-------SLFNLAQLQILDLADNDFNYSQIPSR 417
+ DE TG I Y YL + S S+ L I++L+ N F IPS
Sbjct: 629 EIDESTGFPEYISDPYDIYYNYLTTISTKGQDYDSVRILDSNMIINLSKNRFE-GHIPSI 687
Query: 418 IGEFSKLTHLNLSLTSFSGEVPQEVSH*SKLLSLDL 525
IG+ L LNLS G +P + S L SLDL
Sbjct: 688 IGDLVGLRTLNLSHNVLEGHIPASFQNLSVLESLDL 723
Score = 33.9 bits (76), Expect = 1.4
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +1
Query: 292 IDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEFSKLTHLNLSLTSFS 471
I+LS ++ G++ S + +L L+ L+L+ N IP+ S L L+LS S
Sbjct: 673 INLSKNRFEGHIPS--IIGDLVGLRTLNLSHNVLE-GHIPASFQNLSVLESLDLSSNKIS 729
Query: 472 GEVPQEVSH*SKLLSLDL 525
GE+PQ+++ + L L+L
Sbjct: 730 GEIPQQLASLTFLEVLNL 747
Score = 33.5 bits (75), Expect = 1.8
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 25/110 (22%)
Frame = +1
Query: 274 TGHVIGIDLSSSQLYGYLDSNSSLFNLAQLQILDLADND----------FNYS------- 402
+ H+ + LS + L G L +F+L+ L+ LDL+ N +N S
Sbjct: 213 SSHLTTLQLSGTGLRGLLPER--VFHLSDLEFLDLSYNSQLMVRFPTTKWNSSASLMKLY 270
Query: 403 --------QIPSRIGEFSKLTHLNLSLTSFSGEVPQEVSH*SKLLSLDLR 528
+IP + L L++ T+ SG +P+ + + + + SLDLR
Sbjct: 271 VHSVNIADRIPESFSHLTSLHELDMGYTNLSGPIPKPLWNLTNIESLDLR 320
>emb|CAA05275.1| Hcr9-9D [Lycopersicon pimpinellifolium]
Length = 866
Score = 135 bits (339), Expect = 4e-31
Identities = 72/140 (51%), Positives = 90/140 (63%), Gaps = 8/140 (5%)
Frame = +1
Query: 115 CHEDDSHALLQFKEGFAISK--------LASENPLSYPKVASWNASTDCCSSWDGIQCDE 270
C ED + ALLQFK F ++ + SYP+ SWN ST CCS WDG+ CDE
Sbjct: 28 CPEDQALALLQFKNMFTVNPNAFHYCPDITGREIQSYPRTLSWNKSTSCCS-WDGVHCDE 86
Query: 271 HTGHVIGIDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEFSKLTHLN 450
TG VI +DL SQL G SNSSLF L+ L+ LDL++N+F S I + GEFS LTHL+
Sbjct: 87 TTGQVIALDLRCSQLQGKFHSNSSLFQLSNLKRLDLSNNNFIGSLISPKFGEFSDLTHLD 146
Query: 451 LSLTSFSGEVPQEVSH*SKL 510
LS +SF+G +P E+SH SKL
Sbjct: 147 LSDSSFTGVIPSEISHLSKL 166
Score = 35.4 bits (80), Expect = 0.48
Identities = 27/65 (41%), Positives = 36/65 (54%)
Frame = +1
Query: 292 IDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEFSKLTHLNLSLTSFS 471
+D SS+ L G + SN S L LQ L L+ N N S IPS I L L+LS +FS
Sbjct: 367 LDFSSNSLTGPIPSNVS--GLRNLQSLYLSSNYLNGS-IPSWIFSLPSLIVLDLSNNTFS 423
Query: 472 GEVPQ 486
G++ +
Sbjct: 424 GKIQE 428
Score = 33.9 bits (76), Expect = 1.4
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = +1
Query: 367 ILDLADNDFNYSQIPSRIGEFSKLTHLNLSLTSFSGEVPQEVSH*SKLLSLDL 525
I++L+ N F +IPS IG+ L LNLS G +P + S L SLDL
Sbjct: 675 IINLSKNRFE-GRIPSIIGDLVGLRTLNLSHNVLEGHIPASFQNLSVLESLDL 726
Score = 33.5 bits (75), Expect = 1.8
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 25/110 (22%)
Frame = +1
Query: 274 TGHVIGIDLSSSQLYGYLDSNSSLFNLAQLQILDLADND----------FNYS------- 402
+ H+ + LS + L G L +F+L+ L+ LDL+ N +N S
Sbjct: 213 SSHLTTLQLSGTGLRGLLPER--VFHLSDLEFLDLSYNSQLTVRFPTTKWNSSASLMKLY 270
Query: 403 --------QIPSRIGEFSKLTHLNLSLTSFSGEVPQEVSH*SKLLSLDLR 528
+IP + L L++ T+ SG +P+ + + + + SLDLR
Sbjct: 271 VHSVNIADRIPESFSHLTSLHELDMGYTNLSGPIPKPLWNLTNIESLDLR 320
Score = 32.3 bits (72), Expect = 4.0
Identities = 25/78 (32%), Positives = 42/78 (53%)
Frame = +1
Query: 292 IDLSSSQLYGYLDSNSSLFNLAQLQILDLADNDFNYSQIPSRIGEFSKLTHLNLSLTSFS 471
I+LS ++ G + S + +L L+ L+L+ N IP+ S L L+LS S
Sbjct: 676 INLSKNRFEGRIPS--IIGDLVGLRTLNLSHNVLE-GHIPASFQNLSVLESLDLSSNKIS 732
Query: 472 GEVPQEVSH*SKLLSLDL 525
GE+PQ+++ + L L+L
Sbjct: 733 GEIPQQLASLTFLEVLNL 750
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 442,042,406
Number of Sequences: 1393205
Number of extensions: 8490037
Number of successful extensions: 25416
Number of sequences better than 10.0: 943
Number of HSP's better than 10.0 without gapping: 20829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24388
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19808345223
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
