Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005646A_C01 KMC005646A_c01
(586 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_567116.1| putative protein; protein id: At3g61710.1, supp... 184 5e-46
dbj|BAC01253.1| putative beclin 1 [Oryza sativa (japonica cultiv... 149 3e-35
gb|AAK64577.1| beclin1-like protein [Triticum aestivum] 139 3e-32
sp|Q9M367|BCN1_ARATH Beclin 1-like protein gi|11357459|pir||T479... 77 2e-13
gb|EAA06006.1| agCP13850 [Anopheles gambiae str. PEST] 70 2e-11
>ref|NP_567116.1| putative protein; protein id: At3g61710.1, supported by cDNA:
gi_14517555 [Arabidopsis thaliana]
gi|14517556|gb|AAK62668.1| AT3g61710/F15G16_100
[Arabidopsis thaliana] gi|23308215|gb|AAN18077.1|
At3g61710/F15G16_100 [Arabidopsis thaliana]
Length = 517
Score = 184 bits (468), Expect = 5e-46
Identities = 87/118 (73%), Positives = 97/118 (81%)
Frame = -1
Query: 586 STRYDKAMTLFLACLKDFAEFAISKDQENNIPPEQCFKLPYKIDNDKVEDDSITQSFNKQ 407
STRYDKAMTL+L CLKDFA+FA SKDQENNIPP+ C LPYKI+ DKV SITQSFNKQ
Sbjct: 396 STRYDKAMTLYLMCLKDFADFANSKDQENNIPPDNCLNLPYKIEKDKVLGYSITQSFNKQ 455
Query: 406 ENWTKALKYTLCNLKWALYWFVGNTNFQPLSTMVSSHAEVPAVGSLHPKRGTETKSES 233
E+WTKALKYTLCNLKWALYWFVGNTNFQPLS VS + + A GSL+ KRG ++ S
Sbjct: 456 ESWTKALKYTLCNLKWALYWFVGNTNFQPLSATVSLPSNISAAGSLYAKRGPDSSKPS 513
>dbj|BAC01253.1| putative beclin 1 [Oryza sativa (japonica cultivar-group)]
Length = 481
Score = 149 bits (375), Expect = 3e-35
Identities = 68/91 (74%), Positives = 76/91 (82%)
Frame = -1
Query: 586 STRYDKAMTLFLACLKDFAEFAISKDQENNIPPEQCFKLPYKIDNDKVEDDSITQSFNKQ 407
STR+DKAMT FL CL+DFAEFAIS D+ENN+PPE+ KLPYKID DKV +I SFNK
Sbjct: 355 STRFDKAMTWFLTCLQDFAEFAISLDKENNVPPEKSLKLPYKIDGDKVGSHTIFLSFNKV 414
Query: 406 ENWTKALKYTLCNLKWALYWFVGNTNFQPLS 314
ENWTKALKYTLCNLKW LYWF+GNT+F P S
Sbjct: 415 ENWTKALKYTLCNLKWVLYWFIGNTSFAPPS 445
>gb|AAK64577.1| beclin1-like protein [Triticum aestivum]
Length = 441
Score = 139 bits (349), Expect = 3e-32
Identities = 63/91 (69%), Positives = 74/91 (81%)
Frame = -1
Query: 586 STRYDKAMTLFLACLKDFAEFAISKDQENNIPPEQCFKLPYKIDNDKVEDDSITQSFNKQ 407
STR+DKAMT FL CL++F+EFAIS D+ENN+P ++ KLPYKID DKV +I SFNK
Sbjct: 338 STRFDKAMTWFLTCLQEFSEFAISLDKENNVPSDKSLKLPYKIDGDKVGSYTIFLSFNKL 397
Query: 406 ENWTKALKYTLCNLKWALYWFVGNTNFQPLS 314
ENWTKALKY LCNLKW LYWF+GNT+F P S
Sbjct: 398 ENWTKALKYMLCNLKWVLYWFIGNTSFAPPS 428
>sp|Q9M367|BCN1_ARATH Beclin 1-like protein gi|11357459|pir||T47963 hypothetical protein
F15G16.100 - Arabidopsis thaliana
gi|6850862|emb|CAB71101.1| putative protein [Arabidopsis
thaliana]
Length = 443
Score = 77.0 bits (188), Expect = 2e-13
Identities = 34/42 (80%), Positives = 37/42 (87%)
Frame = -1
Query: 586 STRYDKAMTLFLACLKDFAEFAISKDQENNIPPEQCFKLPYK 461
STRYDKAMTL+L CLKDFA+FA SKDQENNIPP+ C LPYK
Sbjct: 372 STRYDKAMTLYLMCLKDFADFANSKDQENNIPPDNCLNLPYK 413
>gb|EAA06006.1| agCP13850 [Anopheles gambiae str. PEST]
Length = 451
Score = 70.1 bits (170), Expect = 2e-11
Identities = 37/85 (43%), Positives = 47/85 (54%), Gaps = 6/85 (7%)
Frame = -1
Query: 583 TRYDKAMTLFLACLKDFAEFAISKDQENNIPPEQCFKLPYKIDNDKVEDDSITQSF---- 416
++YD AM FL CL+ F E + +D + F LPY ++ K+ED S SF
Sbjct: 364 SKYDAAMVAFLDCLQQFKEEIVRRDPD--------FCLPYLMEKGKIEDASTGSSFSIKI 415
Query: 415 --NKQENWTKALKYTLCNLKWALYW 347
N +E WTKALKY L NLKW L W
Sbjct: 416 QFNSEEQWTKALKYLLTNLKWVLTW 440
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 449,720,310
Number of Sequences: 1393205
Number of extensions: 9196119
Number of successful extensions: 23045
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 22080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23031
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21997688174
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
