Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005632A_C01 KMC005632A_c01
(592 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176049.1| alkaline/neutral invertase, putative; protein i... 142 4e-33
emb|CAA76145.1| neutral invertase [Daucus carota] 125 3e-28
ref|NP_187233.1| putative alkaline/neutral invertase; protein id... 125 5e-28
gb|AAO42161.1| putative alkaline/neutral invertase [Arabidopsis ... 125 5e-28
ref|NP_187302.1| neutral invertase, putative; protein id: At3g06... 103 2e-21
>ref|NP_176049.1| alkaline/neutral invertase, putative; protein id: At1g56560.1
[Arabidopsis thaliana] gi|25354738|pir||C96607 probable
invertase F25P12.99 [imported] - Arabidopsis thaliana
gi|9954756|gb|AAG09107.1|AC009323_18 Putative invertase
[Arabidopsis thaliana] gi|21539565|gb|AAM53335.1|
putative alkaline/neutral invertase [Arabidopsis
thaliana]
Length = 616
Score = 142 bits (357), Expect = 4e-33
Identities = 65/75 (86%), Positives = 73/75 (96%)
Frame = -2
Query: 591 DTRSGKFVGKQARLYQTWTIAGFLTSKMLLKNPEMASMLFWEEDYELLDICACGLKKSGR 412
DTRSGKF+GKQ+RLYQTWT+AGFLTSK+LL NPEMAS+LFWEEDYELLDICACGL+KS R
Sbjct: 542 DTRSGKFIGKQSRLYQTWTVAGFLTSKLLLANPEMASLLFWEEDYELLDICACGLRKSDR 601
Query: 411 RKCSRVAAKSQILVR 367
+KCSRVAAK+QILVR
Sbjct: 602 KKCSRVAAKTQILVR 616
>emb|CAA76145.1| neutral invertase [Daucus carota]
Length = 675
Score = 125 bits (315), Expect = 3e-28
Identities = 56/73 (76%), Positives = 66/73 (89%)
Frame = -2
Query: 591 DTRSGKFVGKQARLYQTWTIAGFLTSKMLLKNPEMASMLFWEEDYELLDICACGLKKSGR 412
DTR G+F+GKQ+RLYQTWTIAGFLTSK+LL+NPEMAS LFWEEDYELL+ C C + KSGR
Sbjct: 603 DTRRGRFIGKQSRLYQTWTIAGFLTSKLLLENPEMASKLFWEEDYELLESCVCAIGKSGR 662
Query: 411 RKCSRVAAKSQIL 373
+KCSR AAKSQ++
Sbjct: 663 KKCSRFAAKSQVV 675
>ref|NP_187233.1| putative alkaline/neutral invertase; protein id: At3g05820.1
[Arabidopsis thaliana]
gi|6714395|gb|AAF26084.1|AC012393_10 putative
alkaline/neutral invertase [Arabidopsis thaliana]
Length = 622
Score = 125 bits (313), Expect = 5e-28
Identities = 58/74 (78%), Positives = 65/74 (87%)
Frame = -2
Query: 591 DTRSGKFVGKQARLYQTWTIAGFLTSKMLLKNPEMASMLFWEEDYELLDICACGLKKSGR 412
DTR GKF+GKQ+RLYQTWTIAGFLTSK LL+NPE+AS LFWEED ELL+ C C L KSGR
Sbjct: 549 DTRDGKFIGKQSRLYQTWTIAGFLTSKQLLQNPEIASSLFWEEDLELLESCVCVLTKSGR 608
Query: 411 RKCSRVAAKSQILV 370
+KCSR AAKSQIL+
Sbjct: 609 KKCSRAAAKSQILI 622
>gb|AAO42161.1| putative alkaline/neutral invertase [Arabidopsis thaliana]
gi|28973581|gb|AAO64115.1| putative alkaline/neutral
invertase [Arabidopsis thaliana]
Length = 633
Score = 125 bits (313), Expect = 5e-28
Identities = 58/74 (78%), Positives = 65/74 (87%)
Frame = -2
Query: 591 DTRSGKFVGKQARLYQTWTIAGFLTSKMLLKNPEMASMLFWEEDYELLDICACGLKKSGR 412
DTR GKF+GKQ+RLYQTWTIAGFLTSK LL+NPE+AS LFWEED ELL+ C C L KSGR
Sbjct: 560 DTRDGKFIGKQSRLYQTWTIAGFLTSKQLLQNPEIASSLFWEEDLELLESCVCVLTKSGR 619
Query: 411 RKCSRVAAKSQILV 370
+KCSR AAKSQIL+
Sbjct: 620 KKCSRAAAKSQILI 633
>ref|NP_187302.1| neutral invertase, putative; protein id: At3g06500.1 [Arabidopsis
thaliana] gi|12322685|gb|AAG51337.1|AC020580_17 neutral
invertase, putative; 73674-70896 [Arabidopsis thaliana]
Length = 536
Score = 103 bits (256), Expect = 2e-21
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 2/67 (2%)
Frame = -2
Query: 591 DTRSGKFVGKQARLYQTWTIAGFLTSKMLLKNPEMASMLFWEEDYELLDICACGLKKSGR 412
DT+SG+FVGKQ+RLYQTWTIAGFL +K L++ PE AS+LFWEEDY+LL+ C CGL KS
Sbjct: 464 DTKSGRFVGKQSRLYQTWTIAGFLAAKKLIEQPEKASLLFWEEDYQLLETCVCGLSKSSG 523
Query: 411 R--KCSR 397
R KCSR
Sbjct: 524 RKNKCSR 530
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 500,668,952
Number of Sequences: 1393205
Number of extensions: 10410743
Number of successful extensions: 31288
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 30344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31262
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22569056698
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
