Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005605A_C01 KMC005605A_c01
(543 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_188081.1| cytochrome P450, putative; protein id: At3g1463... 199 2e-50
dbj|BAB02395.1| cytochrome P450-like protein [Arabidopsis thaliana] 199 2e-50
ref|NP_188086.1| cytochrome P450, putative; protein id: At3g1468... 195 3e-49
ref|NP_188079.1| cytochrome P450, putative; protein id: At3g1461... 193 1e-48
ref|NP_188087.1| cytochrome P450, putative; protein id: At3g1469... 192 3e-48
>ref|NP_188081.1| cytochrome P450, putative; protein id: At3g14630.1 [Arabidopsis
thaliana]
Length = 508
Score = 199 bits (505), Expect = 2e-50
Identities = 86/133 (64%), Positives = 109/133 (81%)
Frame = -2
Query: 542 LRLYPPVTYFNRVARQDVKLGNFTIPAGVNVSLPILLIHHDRNIWGDDATEFEPERFSEG 363
LRLYPPV NR +++KLG+ T+P G+ V +P+LLIH D +WGDDA EF+PERF +G
Sbjct: 376 LRLYPPVIQMNRATHKEIKLGDMTLPGGIQVHMPVLLIHRDTKLWGDDAAEFKPERFKDG 435
Query: 362 LAKATKGQVSFFPFGWGPRVCIGQNFALLEAKIVISLILQRFSFELSPTYAHAPRTTFSL 183
+AKATK QV F PFGWGPR+CIGQNFALLEAK+ ++LILQRFSFELSP+Y H+P F++
Sbjct: 436 IAKATKNQVCFLPFGWGPRICIGQNFALLEAKMALALILQRFSFELSPSYVHSPYRVFTI 495
Query: 182 NPKPGAHIILHKL 144
+P+ GAH+ILHKL
Sbjct: 496 HPQCGAHLILHKL 508
>dbj|BAB02395.1| cytochrome P450-like protein [Arabidopsis thaliana]
Length = 506
Score = 199 bits (505), Expect = 2e-50
Identities = 86/133 (64%), Positives = 109/133 (81%)
Frame = -2
Query: 542 LRLYPPVTYFNRVARQDVKLGNFTIPAGVNVSLPILLIHHDRNIWGDDATEFEPERFSEG 363
LRLYPPV NR +++KLG+ T+P G+ V +P+LLIH D +WGDDA EF+PERF +G
Sbjct: 374 LRLYPPVIQMNRATHKEIKLGDMTLPGGIQVHMPVLLIHRDTKLWGDDAAEFKPERFKDG 433
Query: 362 LAKATKGQVSFFPFGWGPRVCIGQNFALLEAKIVISLILQRFSFELSPTYAHAPRTTFSL 183
+AKATK QV F PFGWGPR+CIGQNFALLEAK+ ++LILQRFSFELSP+Y H+P F++
Sbjct: 434 IAKATKNQVCFLPFGWGPRICIGQNFALLEAKMALALILQRFSFELSPSYVHSPYRVFTI 493
Query: 182 NPKPGAHIILHKL 144
+P+ GAH+ILHKL
Sbjct: 494 HPQCGAHLILHKL 506
>ref|NP_188086.1| cytochrome P450, putative; protein id: At3g14680.1, supported by
cDNA: gi_13605896 [Arabidopsis thaliana]
gi|9294390|dbj|BAB02400.1| cytochrome P450 [Arabidopsis
thaliana] gi|13605897|gb|AAK32934.1|AF367347_1
AT3g14680/MIE1_18 [Arabidopsis thaliana]
gi|24111277|gb|AAN46762.1| At3g14680/MIE1_18
[Arabidopsis thaliana]
Length = 512
Score = 195 bits (495), Expect = 3e-49
Identities = 87/133 (65%), Positives = 108/133 (80%)
Frame = -2
Query: 542 LRLYPPVTYFNRVARQDVKLGNFTIPAGVNVSLPILLIHHDRNIWGDDATEFEPERFSEG 363
LRLYPPV R +++KLG+ T+P GV +SLP+LL+H D +WG+DA EF+PERF +G
Sbjct: 380 LRLYPPVVQLTRAIHKEMKLGDLTLPGGVQISLPVLLVHRDTELWGNDAGEFKPERFKDG 439
Query: 362 LAKATKGQVSFFPFGWGPRVCIGQNFALLEAKIVISLILQRFSFELSPTYAHAPRTTFSL 183
L+KATK QVSFFPF WGPR+CIGQNF LLEAK+ +SLILQRFSFELSP+Y HAP T +L
Sbjct: 440 LSKATKNQVSFFPFAWGPRICIGQNFTLLEAKMAMSLILQRFSFELSPSYVHAPYTIITL 499
Query: 182 NPKPGAHIILHKL 144
P+ GAH++LHKL
Sbjct: 500 YPQFGAHLMLHKL 512
>ref|NP_188079.1| cytochrome P450, putative; protein id: At3g14610.1, supported by
cDNA: gi_18252154 [Arabidopsis thaliana]
gi|9294383|dbj|BAB02393.1| cytochrome P450 [Arabidopsis
thaliana] gi|18252155|gb|AAL61910.1| cytochrome P450
[Arabidopsis thaliana] gi|28059362|gb|AAO30051.1|
cytochrome P450 [Arabidopsis thaliana]
Length = 512
Score = 193 bits (491), Expect = 1e-48
Identities = 84/133 (63%), Positives = 108/133 (81%)
Frame = -2
Query: 542 LRLYPPVTYFNRVARQDVKLGNFTIPAGVNVSLPILLIHHDRNIWGDDATEFEPERFSEG 363
LRLYPPV RV +++KLG T+PAG+ + LP +L+ D +WGDDA +F+PERF +G
Sbjct: 380 LRLYPPVAQLKRVVNKEMKLGELTLPAGIQIYLPTILVQRDTELWGDDAADFKPERFRDG 439
Query: 362 LAKATKGQVSFFPFGWGPRVCIGQNFALLEAKIVISLILQRFSFELSPTYAHAPRTTFSL 183
L+KATK QVSFFPFGWGPR+CIGQNFA+LEAK+ ++LILQ+FSFELSP+Y HAP+T +
Sbjct: 440 LSKATKNQVSFFPFGWGPRICIGQNFAMLEAKMAMALILQKFSFELSPSYVHAPQTVMTT 499
Query: 182 NPKPGAHIILHKL 144
P+ GAH+ILHKL
Sbjct: 500 RPQFGAHLILHKL 512
>ref|NP_188087.1| cytochrome P450, putative; protein id: At3g14690.1, supported by
cDNA: gi_15292786, supported by cDNA: gi_20465786
[Arabidopsis thaliana] gi|9294391|dbj|BAB02401.1|
cytochrome P450 [Arabidopsis thaliana]
gi|15292787|gb|AAK92762.1| putative cytochrome P450
protein [Arabidopsis thaliana]
gi|20465787|gb|AAM20382.1| putative cytochrome P450
protein [Arabidopsis thaliana]
Length = 512
Score = 192 bits (487), Expect = 3e-48
Identities = 84/133 (63%), Positives = 109/133 (81%)
Frame = -2
Query: 542 LRLYPPVTYFNRVARQDVKLGNFTIPAGVNVSLPILLIHHDRNIWGDDATEFEPERFSEG 363
LRLYPPVT R +++KLG+ T+P GV +SLPILL+ HD +WG+DA EF P+RF +G
Sbjct: 380 LRLYPPVTQLTRAIHKELKLGDLTLPGGVQISLPILLVQHDIELWGNDAAEFNPDRFKDG 439
Query: 362 LAKATKGQVSFFPFGWGPRVCIGQNFALLEAKIVISLILQRFSFELSPTYAHAPRTTFSL 183
L+KATK QVSFFPF WGPR+CIGQNFALLEAK+ ++LIL+RFSFE+SP+Y HAP T ++
Sbjct: 440 LSKATKSQVSFFPFAWGPRICIGQNFALLEAKMAMALILRRFSFEISPSYVHAPYTVITI 499
Query: 182 NPKPGAHIILHKL 144
+P+ GA +I+HKL
Sbjct: 500 HPQFGAQLIMHKL 512
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 461,114,543
Number of Sequences: 1393205
Number of extensions: 9814598
Number of successful extensions: 27929
Number of sequences better than 10.0: 2814
Number of HSP's better than 10.0 without gapping: 25626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26240
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18750593680
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
