Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005590A_C01 KMC005590A_c01
(566 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S29851 protein kinase 6 (EC 2.7.1.-) - soybean gi|170047|gb... 213 1e-54
emb|CAA66149.1| PKF1 [Fagus sylvatica] 186 2e-46
emb|CAC09580.1| protein kinase (PK) [Fagus sylvatica] 186 2e-46
ref|NP_568893.1| protein kinase 6 - like; protein id: At5g58950.... 157 9e-38
gb|AAL58946.1|AF462860_1 AT5g58950/k19m22_150 [Arabidopsis thali... 156 2e-37
>pir||S29851 protein kinase 6 (EC 2.7.1.-) - soybean gi|170047|gb|AAA34002.1|
protein kinase gi|444789|prf||1908223A protein kinase
Length = 462
Score = 213 bits (542), Expect = 1e-54
Identities = 98/115 (85%), Positives = 105/115 (91%)
Frame = -2
Query: 565 WEMLTGTVPYEDMNPFQAAFAVVNKNSRPVIPSNCPPAMRALIERCWSLPPDKRPEFWQV 386
WEMLTGT+PYEDMNP QAAFAVVNKNSRP+IPSNCPPAMRALIE+CWSL PDKRPEFWQV
Sbjct: 349 WEMLTGTIPYEDMNPIQAAFAVVNKNSRPIIPSNCPPAMRALIEQCWSLQPDKRPEFWQV 408
Query: 385 VKVLEPSESSLARDGTLTLLPNPCCQDHKKGLLHWIQKLGPAHHNSGPMLKPKFT 221
VK+LE ESSLA DGTL+L+PNP C DHKKGLLHWIQKLGP H NSGP+ KPKFT
Sbjct: 409 VKILEQFESSLASDGTLSLVPNP-CWDHKKGLLHWIQKLGPLHQNSGPVPKPKFT 462
>emb|CAA66149.1| PKF1 [Fagus sylvatica]
Length = 204
Score = 186 bits (472), Expect = 2e-46
Identities = 88/115 (76%), Positives = 96/115 (82%)
Frame = -2
Query: 565 WEMLTGTVPYEDMNPFQAAFAVVNKNSRPVIPSNCPPAMRALIERCWSLPPDKRPEFWQV 386
WEM+ GT+PY+DMNP QAAFAVVNKN RPVIP +CPPAMRALIE+CWSL +KRPEFWQV
Sbjct: 91 WEMVAGTIPYQDMNPVQAAFAVVNKNLRPVIPRDCPPAMRALIEQCWSLQSEKRPEFWQV 150
Query: 385 VKVLEPSESSLARDGTLTLLPNPCCQDHKKGLLHWIQKLGPAHHNSGPMLKPKFT 221
VKVLE ESSLARDGTL L+ + CQDHKKGLLHWI KLGP H N G M KPK T
Sbjct: 151 VKVLEQFESSLARDGTLNLVQSLTCQDHKKGLLHWIHKLGPVHPN-GSMPKPKLT 204
>emb|CAC09580.1| protein kinase (PK) [Fagus sylvatica]
Length = 480
Score = 186 bits (472), Expect = 2e-46
Identities = 89/115 (77%), Positives = 95/115 (82%)
Frame = -2
Query: 565 WEMLTGTVPYEDMNPFQAAFAVVNKNSRPVIPSNCPPAMRALIERCWSLPPDKRPEFWQV 386
WEM+ GT+PYEDMNP QAAFAVVNKN RPVIP CPPAMRALIE+CWSL +KRPEFWQV
Sbjct: 367 WEMVAGTIPYEDMNPVQAAFAVVNKNLRPVIPRYCPPAMRALIEQCWSLQSEKRPEFWQV 426
Query: 385 VKVLEPSESSLARDGTLTLLPNPCCQDHKKGLLHWIQKLGPAHHNSGPMLKPKFT 221
VKVLE ESSLARDGTL L+ + CQDHKKGLLHWI KLGP H N G M KPK T
Sbjct: 427 VKVLEQFESSLARDGTLNLVQSLTCQDHKKGLLHWIHKLGPVHPN-GSMPKPKLT 480
>ref|NP_568893.1| protein kinase 6 - like; protein id: At5g58950.1, supported by
cDNA: gi_18087632, supported by cDNA: gi_20260119
[Arabidopsis thaliana] gi|9759226|dbj|BAB09638.1|
protein-tyrosine kinase [Arabidopsis thaliana]
gi|20260120|gb|AAM12958.1| protein-tyrosine kinase
[Arabidopsis thaliana]
Length = 525
Score = 157 bits (397), Expect = 9e-38
Identities = 70/107 (65%), Positives = 82/107 (76%)
Frame = -2
Query: 565 WEMLTGTVPYEDMNPFQAAFAVVNKNSRPVIPSNCPPAMRALIERCWSLPPDKRPEFWQV 386
WEM+ G +PYEDMNP QAAFAVV+KN RP IP +CP AM+ALIE+CWS+ PDKRPEFWQ+
Sbjct: 400 WEMVAGAIPYEDMNPIQAAFAVVHKNIRPAIPGDCPVAMKALIEQCWSVAPDKRPEFWQI 459
Query: 385 VKVLEPSESSLARDGTLTLLPNPCCQDHKKGLLHWIQKLGPAHHNSG 245
VKVLE SL R+G L L + C+D +KGL HWIQKLGP H G
Sbjct: 460 VKVLEQFAISLEREGNLNLSSSKICKDPRKGLKHWIQKLGPVHAGGG 506
>gb|AAL58946.1|AF462860_1 AT5g58950/k19m22_150 [Arabidopsis thaliana]
Length = 525
Score = 156 bits (394), Expect = 2e-37
Identities = 70/107 (65%), Positives = 81/107 (75%)
Frame = -2
Query: 565 WEMLTGTVPYEDMNPFQAAFAVVNKNSRPVIPSNCPPAMRALIERCWSLPPDKRPEFWQV 386
WEM+ G +PYEDMNP QAAFAVV+KN RP IP +CP AM+ALIE+CWS+ PDKRPEFWQ+
Sbjct: 400 WEMVAGAIPYEDMNPIQAAFAVVHKNIRPAIPGDCPVAMKALIEQCWSVAPDKRPEFWQI 459
Query: 385 VKVLEPSESSLARDGTLTLLPNPCCQDHKKGLLHWIQKLGPAHHNSG 245
VKVLE SL R G L L + C+D +KGL HWIQKLGP H G
Sbjct: 460 VKVLEQFAISLERKGNLNLSSSKICKDPRKGLKHWIQKLGPVHAGGG 506
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 507,060,347
Number of Sequences: 1393205
Number of extensions: 10994260
Number of successful extensions: 27577
Number of sequences better than 10.0: 1657
Number of HSP's better than 10.0 without gapping: 26665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27498
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
