Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005583A_C01 KMC005583A_c01
(604 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195035.2| aminopeptidase- like protein; protein id: At4g3... 165 4e-40
pir||T05189 glutamyl aminopeptidase homolog F4I10.20 - Arabidops... 155 4e-37
ref|NP_728614.1| Puromycin sensitive aminopeptidase CG1009-PC gi... 103 2e-21
ref|NP_728615.1| Puromycin sensitive aminopeptidase CG1009-PE gi... 103 2e-21
gb|EAA10722.1| ebiP4374 [Anopheles gambiae str. PEST] 103 2e-21
>ref|NP_195035.2| aminopeptidase- like protein; protein id: At4g33090.1, supported by
cDNA: gi_17473510 [Arabidopsis thaliana]
gi|17473511|gb|AAL38379.1| AT4g33090/F4I10_20
[Arabidopsis thaliana] gi|24209879|gb|AAN41401.1|
aminopeptidase M [Arabidopsis thaliana]
gi|29028734|gb|AAO64746.1| At4g33090/F4I10_20
[Arabidopsis thaliana]
Length = 879
Score = 165 bits (418), Expect = 4e-40
Identities = 90/153 (58%), Positives = 108/153 (69%), Gaps = 5/153 (3%)
Frame = +3
Query: 159 IDQFKGQTRLPSFAIPKRYELHLIPDLTACTLSGTVQISLSINENTKFIVLNALELFV-- 332
+DQFKG+ RLP FA+PKRY+L L PDL ACT +GTV I L I +T+FIVLNA +L V
Sbjct: 1 MDQFKGEPRLPKFAVPKRYDLRLNPDLIACTFTGTVAIDLDIVADTRFIVLNAADLSVND 60
Query: 333 LNVSFT---NTHGQHTPCDVLWEGEDEILVLEFDESLSVGEGVLEIEFSGILNEHLCGLY 503
+VSFT ++ P VL+E EDEILVLEF E L G GVL++ F+G+LN+ + G Y
Sbjct: 61 ASVSFTPPSSSKALAAPKVVLFE-EDEILVLEFGEILPHGVGVLKLGFNGVLNDKMKGFY 119
Query: 504 RCTYVDGGVKKNMAVTQFEAVHARRCLPCWDEP 602
R TY G KKNMAVTQFE ARRC PCWDEP
Sbjct: 120 RSTYEHNGEKKNMAVTQFEPADARRCFPCWDEP 152
>pir||T05189 glutamyl aminopeptidase homolog F4I10.20 - Arabidopsis thaliana
gi|4455323|emb|CAB36783.1| aminopeptidase-like protein
[Arabidopsis thaliana] gi|7270256|emb|CAB80026.1|
aminopeptidase-like protein [Arabidopsis thaliana]
Length = 873
Score = 155 bits (392), Expect = 4e-37
Identities = 90/168 (53%), Positives = 108/168 (63%), Gaps = 20/168 (11%)
Frame = +3
Query: 159 IDQFKGQTRLPSFAIPKRYELHLIPDLTACTLSGTVQISLSINENTKFIVLNALELFV-- 332
+DQFKG+ RLP FA+PKRY+L L PDL ACT +GTV I L I +T+FIVLNA +L V
Sbjct: 1 MDQFKGEPRLPKFAVPKRYDLRLNPDLIACTFTGTVAIDLDIVADTRFIVLNAADLSVND 60
Query: 333 LNVSFT---NTHGQHTPCDVLWEGEDEILVLEFDESLSVGEGVLEIEFSGILNEHLCGLY 503
+VSFT ++ P VL+E EDEILVLEF E L G GVL++ F+G+LN+ + G Y
Sbjct: 61 ASVSFTPPSSSKALAAPKVVLFE-EDEILVLEFGEILPHGVGVLKLGFNGVLNDKMKGFY 119
Query: 504 R---------------CTYVDGGVKKNMAVTQFEAVHARRCLPCWDEP 602
R TY G KKNMAVTQFE ARRC PCWDEP
Sbjct: 120 RSSRLILERSCICLGGSTYEHNGEKKNMAVTQFEPADARRCFPCWDEP 167
>ref|NP_728614.1| Puromycin sensitive aminopeptidase CG1009-PC
gi|23092777|gb|AAN11480.1| CG1009-PC [Drosophila
melanogaster]
Length = 1075
Score = 103 bits (257), Expect = 2e-21
Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Frame = +3
Query: 138 KMEQKQNIDQFKGQTRLPSFAIPKRYELHLIPDLTACTLSGTVQISLSINENTKFIVLNA 317
++EQ++ + Q RLP+ +P+ YEL L P+L T +G + +++ E T I LNA
Sbjct: 203 QLEQERKMAQKAKFERLPTNVVPRHYELLLQPNLKEFTFTGKTVVQVNVKEPTTQITLNA 262
Query: 318 LELFVLNVSFTNTHGQHTPCDVLWEGEDEILVLEFDESL-SVGEGVLEIEFSGILNEHLC 494
L++ + +V + P +++ E+E LEF + + + +GVL + F+G LN+ +
Sbjct: 263 LDIVLDSVELHFECSKLKPEKIVYSAENETATLEFAQEIPAETQGVLHMSFTGELNDKMK 322
Query: 495 GLYRCTYV-DGGVKKNMAVTQFEAVHARRCLPCWDEP 602
G YR Y G ++ VTQFEA ARRC PCWDEP
Sbjct: 323 GFYRSKYFGPNGEERFAGVTQFEATDARRCFPCWDEP 359
>ref|NP_728615.1| Puromycin sensitive aminopeptidase CG1009-PE
gi|23092778|gb|AAN11481.1| CG1009-PE [Drosophila
melanogaster]
Length = 1053
Score = 103 bits (257), Expect = 2e-21
Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Frame = +3
Query: 138 KMEQKQNIDQFKGQTRLPSFAIPKRYELHLIPDLTACTLSGTVQISLSINENTKFIVLNA 317
++EQ++ + Q RLP+ +P+ YEL L P+L T +G + +++ E T I LNA
Sbjct: 181 QLEQERKMAQKAKFERLPTNVVPRHYELLLQPNLKEFTFTGKTVVQVNVKEPTTQITLNA 240
Query: 318 LELFVLNVSFTNTHGQHTPCDVLWEGEDEILVLEFDESL-SVGEGVLEIEFSGILNEHLC 494
L++ + +V + P +++ E+E LEF + + + +GVL + F+G LN+ +
Sbjct: 241 LDIVLDSVELHFECSKLKPEKIVYSAENETATLEFAQEIPAETQGVLHMSFTGELNDKMK 300
Query: 495 GLYRCTYV-DGGVKKNMAVTQFEAVHARRCLPCWDEP 602
G YR Y G ++ VTQFEA ARRC PCWDEP
Sbjct: 301 GFYRSKYFGPNGEERFAGVTQFEATDARRCFPCWDEP 337
>gb|EAA10722.1| ebiP4374 [Anopheles gambiae str. PEST]
Length = 809
Score = 103 bits (256), Expect = 2e-21
Identities = 56/141 (39%), Positives = 77/141 (53%), Gaps = 1/141 (0%)
Frame = +3
Query: 183 RLPSFAIPKRYELHLIPDLTACTLSGTVQISLSINENTKFIVLNALELFVLNVSFTNTHG 362
RLP+ +P+ Y L L P+LTA T G + L + E T I LNAL+L + + +
Sbjct: 1 RLPTNVVPEHYRLTLKPNLTALTFEGNTAVELKVVEATDRITLNALDLKLGTATVSFGDQ 60
Query: 363 QHTPCDVLWEGEDEILVLEFDESLSVGEGVLEIEFSGILNEHLCGLYRCTYVD-GGVKKN 539
Q T D+ ++ E + F + G+ L +EFSG LN+ + G YR Y G ++
Sbjct: 61 QLTAQDIQFDAGQETVCFVFGAEIPPGKATLAVEFSGELNDKMKGFYRSKYFSPTGEERY 120
Query: 540 MAVTQFEAVHARRCLPCWDEP 602
VTQFEA ARRC PCWDEP
Sbjct: 121 AGVTQFEATDARRCFPCWDEP 141
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 526,426,413
Number of Sequences: 1393205
Number of extensions: 10637758
Number of successful extensions: 29731
Number of sequences better than 10.0: 254
Number of HSP's better than 10.0 without gapping: 27705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29400
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
