Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005578A_C01 KMC005578A_c01
(582 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_189510.1| protein kinase, putative; protein id: At3g28690... 36 0.40
dbj|BAB02184.1| protein kinase [Arabidopsis thaliana] 36 0.40
gb|AAL25438.1| LD31893p [Drosophila melanogaster] 31 9.9
pir||A48678 activin receptor II precursor - fruit fly (Drosophil... 31 9.9
ref|NP_731926.1| punt CG7904-PA gi|784876|gb|AAC41566.1| punt re... 31 9.9
>ref|NP_189510.1| protein kinase, putative; protein id: At3g28690.1 [Arabidopsis
thaliana]
Length = 476
Score = 35.8 bits (81), Expect = 0.40
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -2
Query: 581 RKGQPLRILSSPNRPLGSPFHQFSKSPKPNG*E 483
R G P+R LSS N P SP+ +SPKP G E
Sbjct: 443 RNGPPMRSLSSLNLPQASPYRYARQSPKPKGKE 475
>dbj|BAB02184.1| protein kinase [Arabidopsis thaliana]
Length = 483
Score = 35.8 bits (81), Expect = 0.40
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -2
Query: 581 RKGQPLRILSSPNRPLGSPFHQFSKSPKPNG*E 483
R G P+R LSS N P SP+ +SPKP G E
Sbjct: 450 RNGPPMRSLSSLNLPQASPYRYARQSPKPKGKE 482
>gb|AAL25438.1| LD31893p [Drosophila melanogaster]
Length = 284
Score = 31.2 bits (69), Expect = 9.9
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 434 LWPSADQVNETVVF--LRVALSILWRNHPGFLLFYSLK*D*GNHD 306
L PS D+V E+VV LR L WR HPG +F + +HD
Sbjct: 197 LRPSLDEVQESVVMKKLRPRLLNSWRAHPGLNVFCDTMEECWDHD 241
>pir||A48678 activin receptor II precursor - fruit fly (Drosophila melanogaster)
gi|408505|gb|AAA03579.1| activin receptor
Length = 516
Score = 31.2 bits (69), Expect = 9.9
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 434 LWPSADQVNETVVF--LRVALSILWRNHPGFLLFYSLK*D*GNHD 306
L PS D+V E+VV LR L WR HPG +F + +HD
Sbjct: 429 LRPSLDEVQESVVMKKLRPRLLNSWRAHPGLNVFCDTMEECWDHD 473
>ref|NP_731926.1| punt CG7904-PA gi|784876|gb|AAC41566.1| punt receptor
serine/threonine kinase gi|7299904|gb|AAF55079.1|
CG7904-PA [Drosophila melanogaster]
gi|1095518|prf||2109242A Ser/Thr kinase
Length = 516
Score = 31.2 bits (69), Expect = 9.9
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 434 LWPSADQVNETVVF--LRVALSILWRNHPGFLLFYSLK*D*GNHD 306
L PS D+V E+VV LR L WR HPG +F + +HD
Sbjct: 429 LRPSLDEVQESVVMKKLRPRLLNSWRAHPGLNVFCDTMEECWDHD 473
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 515,388,204
Number of Sequences: 1393205
Number of extensions: 11357718
Number of successful extensions: 20122
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20118
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
