Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005576A_C01 KMC005576A_c01
(547 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T03740 glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) TP... 200 1e-50
sp|Q43839|G6PC_SOLTU Glucose-6-phosphate 1-dehydrogenase, chloro... 200 1e-50
pir||T09089 glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (c... 192 2e-48
emb|CAA59012.1| glucose-6-phosphate 1-dehydrogenase [Arabidopsis... 192 3e-48
ref|NP_198428.1| glucose-6-phosphate dehydrogenase; protein id: ... 192 3e-48
>pir||T03740 glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) TPG18 - common
tobacco gi|3021532|emb|CAA04994.1| glucose-6-phosphate
dehydrogenase [Nicotiana tabacum]
Length = 588
Score = 200 bits (508), Expect = 1e-50
Identities = 93/109 (85%), Positives = 103/109 (94%)
Frame = -3
Query: 545 YLKVNNQIPGLGMRLDSSDLHLLYRARYPTEIPDAYERLLLDAIEGERRLFIRSDELDAA 366
YLK+NN++PGLGMRLD SDL+LLY+A+Y EIPDAYERLLLDAIEGERRLFIRSDELDAA
Sbjct: 480 YLKINNKVPGLGMRLDRSDLNLLYKAKYRGEIPDAYERLLLDAIEGERRLFIRSDELDAA 539
Query: 365 WALFTPLLKEVEDKKIAPELYPHGSRGPIGAHYLAAKHNVRWGDTGNDD 219
WALFTPLLKE+E+KKIAPELYP+GSRGP+GAHYLAAKHNVRWGD DD
Sbjct: 540 WALFTPLLKELEEKKIAPELYPYGSRGPVGAHYLAAKHNVRWGDLSGDD 588
>sp|Q43839|G6PC_SOLTU Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (G6PD)
gi|7431272|pir||T07375 glucose-6-phosphate
1-dehydrogenase (EC 1.1.1.49), chloroplast - potato
gi|1197385|emb|CAA58775.1| glucose-6-phosphate
dehydrogenase [Solanum tuberosum]
Length = 577
Score = 200 bits (508), Expect = 1e-50
Identities = 93/109 (85%), Positives = 103/109 (94%)
Frame = -3
Query: 545 YLKVNNQIPGLGMRLDSSDLHLLYRARYPTEIPDAYERLLLDAIEGERRLFIRSDELDAA 366
YLK+NN++PGLGMRLD SDL+LLY+A+Y EIPDAYERLLLDAIEGERRLFIRSDELDAA
Sbjct: 469 YLKINNKVPGLGMRLDRSDLNLLYKAKYRGEIPDAYERLLLDAIEGERRLFIRSDELDAA 528
Query: 365 WALFTPLLKEVEDKKIAPELYPHGSRGPIGAHYLAAKHNVRWGDTGNDD 219
WALFTPLLKE+E+KKIAPELYP+GSRGP+GAHYLAAKHNVRWGD DD
Sbjct: 529 WALFTPLLKELEEKKIAPELYPYGSRGPVGAHYLAAKHNVRWGDLSGDD 577
>pir||T09089 glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (clone O30A5) -
spinach plasmid pZL1 (fragment)
gi|2276346|emb|CAA03940.1| Glucose-6-phosphate
dehydrogenase [Spinacia oleracea]
Length = 317
Score = 192 bits (488), Expect = 2e-48
Identities = 88/109 (80%), Positives = 100/109 (91%)
Frame = -3
Query: 545 YLKVNNQIPGLGMRLDSSDLHLLYRARYPTEIPDAYERLLLDAIEGERRLFIRSDELDAA 366
YLK+NN++PGLGMRLD +DL+L Y RY EIPDAYERLLLDAIEGERRLFIRSDELDAA
Sbjct: 208 YLKINNKVPGLGMRLDRTDLNLCYSTRYRGEIPDAYERLLLDAIEGERRLFIRSDELDAA 267
Query: 365 WALFTPLLKEVEDKKIAPELYPHGSRGPIGAHYLAAKHNVRWGDTGNDD 219
W+LFTPLLKE+E+KK+APELYP+GSRGP+GAHYLAAKHNVRWGD +D
Sbjct: 268 WSLFTPLLKELEEKKVAPELYPYGSRGPVGAHYLAAKHNVRWGDLSGED 316
>emb|CAA59012.1| glucose-6-phosphate 1-dehydrogenase [Arabidopsis thaliana]
Length = 514
Score = 192 bits (487), Expect = 3e-48
Identities = 88/106 (83%), Positives = 100/106 (94%)
Frame = -3
Query: 545 YLKVNNQIPGLGMRLDSSDLHLLYRARYPTEIPDAYERLLLDAIEGERRLFIRSDELDAA 366
YL++NN++PGLGMRLD SDL+LLYR+RYP EIPDAYERLLLDAIEGERRLFIRSDELDAA
Sbjct: 407 YLRINNKVPGLGMRLDRSDLNLLYRSRYPREIPDAYERLLLDAIEGERRLFIRSDELDAA 466
Query: 365 WALFTPLLKEVEDKKIAPELYPHGSRGPIGAHYLAAKHNVRWGDTG 228
W LFTP LKE+E+KKI PELYP+GSRGP+GAHYLA+K+NVRWGD G
Sbjct: 467 WDLFTPALKELEEKKIIPELYPYGSRGPVGAHYLASKYNVRWGDLG 512
>ref|NP_198428.1| glucose-6-phosphate dehydrogenase; protein id: At5g35790.1,
supported by cDNA: 22483., supported by cDNA:
gi_20466190 [Arabidopsis thaliana]
gi|21903429|sp|Q43727|GPD1_ARATH Glucose-6-phosphate
1-dehydrogenase 1, chloroplast precursor (G6PD1)
(G6PDH1) gi|10176696|dbj|BAB09918.1| glucose-6-phosphate
dehydrogenase [Arabidopsis thaliana]
gi|20466191|gb|AAM20413.1| glucose-6-phosphate
dehydrogenase [Arabidopsis thaliana]
gi|21592340|gb|AAM64291.1| glucose-6-phosphate
dehydrogenase [Arabidopsis thaliana]
gi|25083966|gb|AAN72144.1| glucose-6-phosphate
dehydrogenase [Arabidopsis thaliana]
Length = 576
Score = 192 bits (487), Expect = 3e-48
Identities = 88/106 (83%), Positives = 100/106 (94%)
Frame = -3
Query: 545 YLKVNNQIPGLGMRLDSSDLHLLYRARYPTEIPDAYERLLLDAIEGERRLFIRSDELDAA 366
YL++NN++PGLGMRLD SDL+LLYR+RYP EIPDAYERLLLDAIEGERRLFIRSDELDAA
Sbjct: 469 YLRINNKVPGLGMRLDRSDLNLLYRSRYPREIPDAYERLLLDAIEGERRLFIRSDELDAA 528
Query: 365 WALFTPLLKEVEDKKIAPELYPHGSRGPIGAHYLAAKHNVRWGDTG 228
W LFTP LKE+E+KKI PELYP+GSRGP+GAHYLA+K+NVRWGD G
Sbjct: 529 WDLFTPALKELEEKKIIPELYPYGSRGPVGAHYLASKYNVRWGDLG 574
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 470,320,044
Number of Sequences: 1393205
Number of extensions: 9850908
Number of successful extensions: 26823
Number of sequences better than 10.0: 288
Number of HSP's better than 10.0 without gapping: 25733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26658
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18660035355
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
