Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005550A_C01 KMC005550A_c01
(746 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_189189.1| ATPase II, putative; protein id: At3g25610.1 [A... 255 5e-67
ref|NP_177038.1| ATPase, putative; protein id: At1g68710.1 [Arab... 252 3e-66
ref|NP_172780.1| potential phospholipid-transporting ATPase 11; ... 244 1e-63
ref|NP_173938.1| P-type transporting ATPase, putative; protein i... 237 2e-61
ref|NP_189425.1| P-type ATPase, putative; protein id: At3g27870.... 202 4e-51
>ref|NP_189189.1| ATPase II, putative; protein id: At3g25610.1 [Arabidopsis thaliana]
gi|12229653|sp|Q9LI83|ALAA_ARATH Potential
phospholipid-transporting ATPase 10 (Aminophospholipid
flippase 10) gi|11994751|dbj|BAB03080.1| P-type
transporting ATPase [Arabidopsis thaliana]
Length = 1202
Score = 255 bits (651), Expect = 5e-67
Identities = 116/195 (59%), Positives = 150/195 (76%)
Frame = -3
Query: 744 DVSARYASSFLFYIKEGVQNILFSWRRILSWMLNGFISAIIIFFFCTKAMGIQAFDEEGR 565
DVSAR+ F +EGVQNILFSW+RI+ WM NGFISA+ IFF C +++ Q FD +G+
Sbjct: 978 DVSARFCYKFPLLYQEGVQNILFSWKRIIGWMFNGFISALAIFFLCKESLKHQLFDPDGK 1037
Query: 564 TAGKDMLAATMYTCVVWVVNLQMALAIRYFTLIQHVCIWGSIAFWHLFLLAYGALPPSIS 385
TAG+++L TMYTCVVWVVNLQMAL+I YFT +QH+ IWGSIAFW++FL+ YGA+ PS S
Sbjct: 1038 TAGREILGGTMYTCVVWVVNLQMALSISYFTWVQHIVIWGSIAFWYIFLMIYGAMTPSFS 1097
Query: 384 TNAY*VFIETLAPSPSFWIVTFFVAISTLIPYFSCSTIQMWFFPMYHEMVRWTRYEEKTN 205
T+AY VF+E LAP+PS+W+ T FV I LIPYF ++QM FFP YH+M++W RYE +N
Sbjct: 1098 TDAYMVFLEALAPAPSYWLTTLFVMIFALIPYFVYKSVQMRFFPKYHQMIQWIRYEGHSN 1157
Query: 204 GPELNTVIR*GKRSI 160
PE ++R +RSI
Sbjct: 1158 DPEFVEMVR--QRSI 1170
>ref|NP_177038.1| ATPase, putative; protein id: At1g68710.1 [Arabidopsis thaliana]
gi|12229673|sp|Q9SX33|ALA9_ARATH Potential
phospholipid-transporting ATPase 9 (Aminophospholipid
flippase 9) gi|25404765|pir||F96711 hypothetical protein
F24J5.6 [imported] - Arabidopsis thaliana
gi|5734708|gb|AAD49973.1|AC008075_6 Similar to
gb|AF067820 ATPase II from Homo sapiens and is a member
of PF|00122 E1-E2 ATPases family. [Arabidopsis thaliana]
Length = 1200
Score = 252 bits (644), Expect = 3e-66
Identities = 116/195 (59%), Positives = 145/195 (73%)
Frame = -3
Query: 744 DVSARYASSFLFYIKEGVQNILFSWRRILSWMLNGFISAIIIFFFCTKAMGIQAFDEEGR 565
DVSARY F +EGVQN+LFSWRRIL WM NGF SA+IIFF C ++ QAF+ +G+
Sbjct: 983 DVSARYCLKFPLLYQEGVQNVLFSWRRILGWMFNGFYSAVIIFFLCKSSLQSQAFNHDGK 1042
Query: 564 TAGKDMLAATMYTCVVWVVNLQMALAIRYFTLIQHVCIWGSIAFWHLFLLAYGALPPSIS 385
T G+++L TMYTC+VWVVNLQMALAI YFTLIQH+ IW SI W+ F+ YG LP IS
Sbjct: 1043 TPGREILGGTMYTCIVWVVNLQMALAISYFTLIQHIVIWSSIVVWYFFITVYGELPSRIS 1102
Query: 384 TNAY*VFIETLAPSPSFWIVTFFVAISTLIPYFSCSTIQMWFFPMYHEMVRWTRYEEKTN 205
T AY VF+E LAPS S+W++T FV ++TL+PYF S +QM FFPMYH M++W RYE + N
Sbjct: 1103 TGAYKVFVEALAPSLSYWLITLFVVVATLMPYFIYSALQMSFFPMYHGMIQWLRYEGQCN 1162
Query: 204 GPELNTVIR*GKRSI 160
PE ++R +RSI
Sbjct: 1163 DPEYCDIVR--QRSI 1175
>ref|NP_172780.1| potential phospholipid-transporting ATPase 11; protein id:
At1g13210.1, supported by cDNA: gi_20466791 [Arabidopsis
thaliana] gi|12229668|sp|Q9SAF5|ALAB_ARATH Potential
phospholipid-transporting ATPase 11 (Aminophospholipid
flippase 11) gi|25529123|pir||F86266 probable
phospholipid-translocating ATPase (EC 3.6.3.1) -
Arabidopsis thaliana gi|4850404|gb|AAD31074.1|AC007357_23
Similar to gb|AF038007 FIC1 gene from Homo sapiens and is
a member of the PF|00122 E1-E2 ATPase family. ESTs
gb|T45045 and gb|AA394473 come from this gene.
[Arabidopsis thaliana] gi|20466792|gb|AAM20713.1| puative
calcium-transporting ATPase [Arabidopsis thaliana]
Length = 1203
Score = 244 bits (622), Expect = 1e-63
Identities = 110/195 (56%), Positives = 146/195 (74%)
Frame = -3
Query: 744 DVSARYASSFLFYIKEGVQNILFSWRRILSWMLNGFISAIIIFFFCTKAMGIQAFDEEGR 565
DVSARY F +EGVQN+LFSW+RI+ WM NG +A+ IFF C +++ Q ++ G+
Sbjct: 979 DVSARYCYKFPLLYQEGVQNLLFSWKRIIGWMFNGVFTALAIFFLCKESLKHQLYNPNGK 1038
Query: 564 TAGKDMLAATMYTCVVWVVNLQMALAIRYFTLIQHVCIWGSIAFWHLFLLAYGALPPSIS 385
TAG+++L TMYTCVVWVVNLQMALAI YFT +QH+ IWGS+AFW++FL+ YGA+ PS S
Sbjct: 1039 TAGREILGGTMYTCVVWVVNLQMALAISYFTWLQHIVIWGSVAFWYIFLMIYGAITPSFS 1098
Query: 384 TNAY*VFIETLAPSPSFWIVTFFVAISTLIPYFSCSTIQMWFFPMYHEMVRWTRYEEKTN 205
T+AY VFIE LAP+PS+W+ T FV LIP+F ++QM FFP YH+M++W RYE +N
Sbjct: 1099 TDAYKVFIEALAPAPSYWLTTLFVMFFALIPFFVFKSVQMRFFPGYHQMIQWIRYEGHSN 1158
Query: 204 GPELNTVIR*GKRSI 160
PE ++R +RSI
Sbjct: 1159 DPEFVEMVR--QRSI 1171
>ref|NP_173938.1| P-type transporting ATPase, putative; protein id: At1g26130.1
[Arabidopsis thaliana] gi|13431295|sp|P57792|ALAC_ARATH
Potential phospholipid-transporting ATPase 12
(Aminophospholipid flippase 12) gi|25403032|pir||D86387
probable protein P-type transporting ATPase [imported] -
Arabidopsis thaliana
gi|12321190|gb|AAG50692.1|AC079829_25 P-type transporting
ATPase, putative [Arabidopsis thaliana]
Length = 1184
Score = 237 bits (604), Expect = 2e-61
Identities = 110/178 (61%), Positives = 137/178 (76%)
Frame = -3
Query: 744 DVSARYASSFLFYIKEGVQNILFSWRRILSWMLNGFISAIIIFFFCTKAMGIQAFDEEGR 565
DVSA + F +EGVQN+LFSWRRILSWM +GF SAIIIFF C ++ QAF+ EG+
Sbjct: 979 DVSAPFCLKFPVLYQEGVQNLLFSWRRILSWMFHGFCSAIIIFFLCKTSLESQAFNHEGK 1038
Query: 564 TAGKDMLAATMYTCVVWVVNLQMALAIRYFTLIQHVCIWGSIAFWHLFLLAYGALPPSIS 385
TAG+D+L TMYTCVVWVV+LQM L I YFTLIQHV +WGS+ W+LFL+ YG+LP +S
Sbjct: 1039 TAGRDILGGTMYTCVVWVVSLQMVLTISYFTLIQHVVVWGSVVIWYLFLMVYGSLPIRMS 1098
Query: 384 TNAY*VFIETLAPSPSFWIVTFFVAISTLIPYFSCSTIQMWFFPMYHEMVRWTRYEEK 211
T+AY VF+E LAP+PS+WI T FV +ST++PYF S IQM FFPM H V+ RYE++
Sbjct: 1099 TDAYMVFLEALAPAPSYWITTLFVVLSTMMPYFIFSAIQMRFFPMSHGTVQLLRYEDQ 1156
>ref|NP_189425.1| P-type ATPase, putative; protein id: At3g27870.1 [Arabidopsis
thaliana]
Length = 1174
Score = 202 bits (514), Expect = 4e-51
Identities = 95/179 (53%), Positives = 122/179 (68%)
Frame = -3
Query: 744 DVSARYASSFLFYIKEGVQNILFSWRRILSWMLNGFISAIIIFFFCTKAMGIQAFDEEGR 565
DVSAR + +EGVQN+LFSW RIL WMLNG IS++IIFF M QAF ++G+
Sbjct: 963 DVSARLCLKYPLLYQEGVQNVLFSWERILGWMLNGVISSMIIFFLTINTMATQAFRKDGQ 1022
Query: 564 TAGKDMLAATMYTCVVWVVNLQMALAIRYFTLIQHVCIWGSIAFWHLFLLAYGALPPSIS 385
+L TMY+ VVW VN QMA++I YFT IQH IWGSI W+LFL+ YG+LPP+ S
Sbjct: 1023 VVDYSVLGVTMYSSVVWTVNCQMAISINYFTWIQHCFIWGSIGVWYLFLVIYGSLPPTFS 1082
Query: 384 TNAY*VFIETLAPSPSFWIVTFFVAISTLIPYFSCSTIQMWFFPMYHEMVRWTRYEEKT 208
T A+ VF+ET APSP +W+V F V S L+PYF+ Q+ F PMYH+++ R E+T
Sbjct: 1083 TTAFQVFVETSAPSPIYWLVLFLVVFSALLPYFTYRAFQIKFRPMYHDIIVEQRRTERT 1141
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 701,620,926
Number of Sequences: 1393205
Number of extensions: 16708724
Number of successful extensions: 66815
Number of sequences better than 10.0: 145
Number of HSP's better than 10.0 without gapping: 59874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66717
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 36032594816
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
