Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005546A_C01 KMC005546A_c01
(472 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK82449.1|AC091247_16 putative phospholipase [Oryza sativa] ... 144 4e-34
gb|AAM74513.1| At1g07230/F10K1_4 [Arabidopsis thaliana] gi|24417... 130 5e-30
ref|NP_172203.1| unknown protein; protein id: At1g07230.1 [Arabi... 130 5e-30
dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [A... 89 3e-17
ref|NP_190430.1| putative protein; protein id: At3g48610.1 [Arab... 89 3e-17
>gb|AAK82449.1|AC091247_16 putative phospholipase [Oryza sativa]
gi|18855062|gb|AAL79754.1|AC096687_18 putative
phospholipase [Oryza sativa]
Length = 545
Score = 144 bits (364), Expect = 4e-34
Identities = 69/87 (79%), Positives = 82/87 (93%)
Frame = -3
Query: 467 LRPYGPREDSTLSEFQMELIQLASQLNGDHVLNSYPNIGESMTVGEANRYAEDAVKRFLE 288
L+P+GP+EDS+LSEFQ+ELIQLASQLNGDHVLN+YP+IG +MTVGEANRYAEDAV RFLE
Sbjct: 450 LQPFGPKEDSSLSEFQVELIQLASQLNGDHVLNTYPDIGRTMTVGEANRYAEDAVARFLE 509
Query: 287 AGRAAIKAGANDSAFVTMRPSLTSRVA 207
AGR A++AGAN+SA VTMRP+LTSR +
Sbjct: 510 AGRIALRAGANESALVTMRPALTSRAS 536
>gb|AAM74513.1| At1g07230/F10K1_4 [Arabidopsis thaliana]
gi|24417127|dbj|BAC22506.1| phosphatidylglycerol
specific phospholipase C [Arabidopsis thaliana]
Length = 533
Score = 130 bits (328), Expect = 5e-30
Identities = 64/99 (64%), Positives = 85/99 (85%), Gaps = 1/99 (1%)
Frame = -3
Query: 467 LRPYGPREDSTLSEFQMELIQLASQLNGDHVLNSYPNIGESMTVGEANRYAEDAVKRFLE 288
LRP+G +EDS LSEFQ+ELIQLASQL GDH+LNSYP+IG++MTV E N+YAEDAV++FLE
Sbjct: 435 LRPWGAKEDSKLSEFQVELIQLASQLVGDHLLNSYPDIGKNMTVSEGNKYAEDAVQKFLE 494
Query: 287 AGRAAIKAGANDSAFVTMRPSLTSRVAVKD-SRKHLESY 174
AG AA++AGA+++ VTMRPSLT+R + + + K++ SY
Sbjct: 495 AGMAALEAGADENTIVTMRPSLTTRTSPSEGTNKYIGSY 533
>ref|NP_172203.1| unknown protein; protein id: At1g07230.1 [Arabidopsis thaliana]
gi|25406964|pir||E86207 hypothetical protein [imported]
- Arabidopsis thaliana
gi|8954023|gb|AAF82197.1|AC067971_5 Contains similarity
to an unknown protein T8P19.120 gi|6523092 from
Arabidopsis thaliana BAC T8P19 gb|AL133315. ESTs
gb|R84021, gb|AI992399, gb|H76814, gb|F15169,
gb|AA585873, and gb|AA605516 come from this gene
Length = 533
Score = 130 bits (328), Expect = 5e-30
Identities = 64/99 (64%), Positives = 85/99 (85%), Gaps = 1/99 (1%)
Frame = -3
Query: 467 LRPYGPREDSTLSEFQMELIQLASQLNGDHVLNSYPNIGESMTVGEANRYAEDAVKRFLE 288
LRP+G +EDS LSEFQ+ELIQLASQL GDH+LNSYP+IG++MTV E N+YAEDAV++FLE
Sbjct: 435 LRPWGAKEDSKLSEFQVELIQLASQLVGDHLLNSYPDIGKNMTVSEGNKYAEDAVQKFLE 494
Query: 287 AGRAAIKAGANDSAFVTMRPSLTSRVAVKD-SRKHLESY 174
AG AA++AGA+++ VTMRPSLT+R + + + K++ SY
Sbjct: 495 AGMAALEAGADENTIVTMRPSLTTRTSPSEGTNKYIGSY 533
>dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [Arabidopsis
thaliana]
Length = 520
Score = 88.6 bits (218), Expect = 3e-17
Identities = 45/86 (52%), Positives = 62/86 (71%), Gaps = 1/86 (1%)
Frame = -3
Query: 467 LRPYGPREDSTLSEFQMELIQLASQLNGDHVLNSYPN-IGESMTVGEANRYAEDAVKRFL 291
+R P+ED+ LSEFQ E++QLA+ LNGDH L+S+P IG+ MTV +A+ Y + A RF+
Sbjct: 432 MRATEPKEDAALSEFQGEVVQLAAVLNGDHFLSSFPEEIGKKMTVKQAHEYVKGATSRFI 491
Query: 290 EAGRAAIKAGANDSAFVTMRPSLTSR 213
A + A+K GA+ SA V MR SLT+R
Sbjct: 492 RASKEAMKLGADKSAIVDMRSSLTTR 517
>ref|NP_190430.1| putative protein; protein id: At3g48610.1 [Arabidopsis thaliana]
gi|11358440|pir||T46205 hypothetical protein T8P19.120 -
Arabidopsis thaliana gi|6523092|emb|CAB62350.1| putative
protein [Arabidopsis thaliana]
Length = 462
Score = 88.6 bits (218), Expect = 3e-17
Identities = 45/86 (52%), Positives = 62/86 (71%), Gaps = 1/86 (1%)
Frame = -3
Query: 467 LRPYGPREDSTLSEFQMELIQLASQLNGDHVLNSYPN-IGESMTVGEANRYAEDAVKRFL 291
+R P+ED+ LSEFQ E++QLA+ LNGDH L+S+P IG+ MTV +A+ Y + A RF+
Sbjct: 374 MRATEPKEDAALSEFQGEVVQLAAVLNGDHFLSSFPEEIGKKMTVKQAHEYVKGATSRFI 433
Query: 290 EAGRAAIKAGANDSAFVTMRPSLTSR 213
A + A+K GA+ SA V MR SLT+R
Sbjct: 434 RASKEAMKLGADKSAIVDMRSSLTTR 459
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 391,932,038
Number of Sequences: 1393205
Number of extensions: 8036599
Number of successful extensions: 22433
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 21827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22417
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12524054526
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
