Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005534A_C01 KMC005534A_c01
(593 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL32579.1| protein kinase 5 [Arabidopsis thaliana] gi|202599... 246 2e-64
ref|NP_199586.1| protein kinase (EC 2.7.1.37) 5 (pir||JN0505); p... 246 2e-64
pir||A45510 probable protein kinase - maize (fragment) gi|168618... 246 2e-64
ref|NP_194391.1| putative protein kinase; protein id: At4g26610.... 243 1e-63
ref|NP_200402.1| serine threonine-specific protein kinase ATPK64... 239 1e-62
>gb|AAL32579.1| protein kinase 5 [Arabidopsis thaliana] gi|20259910|gb|AAM13302.1|
protein kinase 5 [Arabidopsis thaliana]
Length = 586
Score = 246 bits (627), Expect = 2e-64
Identities = 118/149 (79%), Positives = 128/149 (85%), Gaps = 2/149 (1%)
Frame = -2
Query: 592 IIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAAR 413
IIKGEGHGSAVDWWTFGIFLYELLFG+TPFKGSGNR TLFNVVGQPLRFPE PVVSFAAR
Sbjct: 438 IIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSGNRQTLFNVVGQPLRFPETPVVSFAAR 497
Query: 412 DLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEK--IPSP 239
DLIRGLL+KEPQ RL +KRGATE+KQHPFFEGVNWALIRCATPPEIPK VE EK +
Sbjct: 498 DLIRGLLMKEPQQRLGFKRGATEVKQHPFFEGVNWALIRCATPPEIPKPVELEKGAVSVA 557
Query: 238 ASSTGEKAVSNMPPANQKGSDNYLEFDFF 152
+ + +K + + QKGSDNYLEFDFF
Sbjct: 558 EAPSSQKTAAGLVLNAQKGSDNYLEFDFF 586
>ref|NP_199586.1| protein kinase (EC 2.7.1.37) 5 (pir||JN0505); protein id:
At5g47750.1, supported by cDNA: gi_15809918, supported
by cDNA: gi_17064849, supported by cDNA: gi_20259909
[Arabidopsis thaliana] gi|421843|pir||JN0505 protein
kinase (EC 2.7.1.37) 5 - Arabidopsis thaliana
gi|217861|dbj|BAA01715.1| serine/threonine protein
kinase [Arabidopsis thaliana]
gi|10177911|dbj|BAB11322.1| protein kinase (EC 2.7.1.37)
5 [Arabidopsis thaliana] gi|15809919|gb|AAL06887.1|
AT5g47750/MCA23_7 [Arabidopsis thaliana]
gi|21360567|gb|AAM47480.1| AT5g47750/MCA23_7
[Arabidopsis thaliana]
Length = 586
Score = 246 bits (627), Expect = 2e-64
Identities = 118/149 (79%), Positives = 128/149 (85%), Gaps = 2/149 (1%)
Frame = -2
Query: 592 IIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAAR 413
IIKGEGHGSAVDWWTFGIFLYELLFG+TPFKGSGNR TLFNVVGQPLRFPE PVVSFAAR
Sbjct: 438 IIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSGNRQTLFNVVGQPLRFPETPVVSFAAR 497
Query: 412 DLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEK--IPSP 239
DLIRGLL+KEPQ RL +KRGATE+KQHPFFEGVNWALIRCATPPEIPK VE EK +
Sbjct: 498 DLIRGLLMKEPQQRLGFKRGATEVKQHPFFEGVNWALIRCATPPEIPKPVELEKGAVSVA 557
Query: 238 ASSTGEKAVSNMPPANQKGSDNYLEFDFF 152
+ + +K + + QKGSDNYLEFDFF
Sbjct: 558 EAPSSQKTAAGLVLNAQKGSDNYLEFDFF 586
>pir||A45510 probable protein kinase - maize (fragment) gi|168618|gb|AAA33509.1|
protein kinase
Length = 416
Score = 246 bits (627), Expect = 2e-64
Identities = 123/147 (83%), Positives = 131/147 (88%)
Frame = -2
Query: 592 IIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAAR 413
IIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPE+PVVSFAAR
Sbjct: 278 IIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAAR 337
Query: 412 DLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEKIPSPAS 233
DLIRGLL+KEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPP+IPK VE IP +
Sbjct: 338 DLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPKPVE---IPRSVA 394
Query: 232 STGEKAVSNMPPANQKGSDNYLEFDFF 152
S+ +KA S A +KGSD YLE +FF
Sbjct: 395 SSSQKATS----AAEKGSD-YLELEFF 416
>ref|NP_194391.1| putative protein kinase; protein id: At4g26610.1, supported by
cDNA: gi_17380933, supported by cDNA: gi_20258942
[Arabidopsis thaliana] gi|7488161|pir||T08927 probable
protein kinase T15N24.60 (EC 2.7.1.-) - Arabidopsis
thaliana gi|4938499|emb|CAB43857.1| putative protein
kinase [Arabidopsis thaliana] gi|7269513|emb|CAB79516.1|
putative protein kinase [Arabidopsis thaliana]
gi|17380934|gb|AAL36279.1| putative protein kinase
[Arabidopsis thaliana] gi|20258943|gb|AAM14187.1|
putative protein kinase [Arabidopsis thaliana]
Length = 506
Score = 243 bits (620), Expect = 1e-63
Identities = 118/148 (79%), Positives = 128/148 (85%), Gaps = 1/148 (0%)
Frame = -2
Query: 592 IIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAAR 413
IIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPE+PVVSFAAR
Sbjct: 367 IIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAAR 426
Query: 412 DLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEKIP-SPA 236
DLIR LLVKEPQHRLAYKRGATE+KQHPFFEGVNWAL+RCA+PPEIPK V++E P +PA
Sbjct: 427 DLIRSLLVKEPQHRLAYKRGATEMKQHPFFEGVNWALVRCASPPEIPKPVDYESAPATPA 486
Query: 235 SSTGEKAVSNMPPANQKGSDNYLEFDFF 152
++T S+ NYLEFDFF
Sbjct: 487 AATSTSVKSD--------QSNYLEFDFF 506
>ref|NP_200402.1| serine threonine-specific protein kinase ATPK64 (pir||S20918);
protein id: At5g55910.1 [Arabidopsis thaliana]
gi|9758211|dbj|BAB08656.1| serine/threonine-specific
protein kinase ATPK64 [Arabidopsis thaliana]
Length = 498
Score = 239 bits (611), Expect = 1e-62
Identities = 120/148 (81%), Positives = 129/148 (87%), Gaps = 1/148 (0%)
Frame = -2
Query: 592 IIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAAR 413
IIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPE+PVVSFAAR
Sbjct: 357 IIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAAR 416
Query: 412 DLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEKI-PSPA 236
DLIR LLVKEPQHRLAYKRGATEIKQHPFFEGVNWAL+RCA+PPEIPK V+ E + P+P
Sbjct: 417 DLIRSLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALVRCASPPEIPKPVDLEALNPTP- 475
Query: 235 SSTGEKAVSNMPPANQKGSDNYLEFDFF 152
T A S+ ++Q NYLEFDFF
Sbjct: 476 --TVPAAASSSVRSDQ---SNYLEFDFF 498
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 520,324,647
Number of Sequences: 1393205
Number of extensions: 11496554
Number of successful extensions: 44830
Number of sequences better than 10.0: 3175
Number of HSP's better than 10.0 without gapping: 41392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43457
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22854740960
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
