Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005517A_C01 KMC005517A_c01
(573 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO23007.1| apyrase-like protein [Medicago truncatula] 146 2e-34
dbj|BAB85978.1| PsAPY2 [Pisum sativum] 142 3e-33
gb|AAG22044.1|AF305783_1 apyrase 2 [Pisum sativum] 124 1e-27
gb|AAF00610.1|AF156781_1 apyrase [Dolichos biflorus] 118 5e-26
gb|AAM98186.1| unknown protein [Arabidopsis thaliana] 117 8e-26
>gb|AAO23007.1| apyrase-like protein [Medicago truncatula]
Length = 467
Score = 146 bits (369), Expect = 2e-34
Identities = 67/75 (89%), Positives = 73/75 (97%)
Frame = -1
Query: 558 CQTKLGDAKSTYPHIEDGNLPYICMDLVYQYTLLVDGFGIYPWQEVTLVKKVKYDDALVE 379
CQTKL +AKSTYP +E+GNLPY+CMDLVYQYTLLVDGFGIYPWQE+TLVKKVKYDDALVE
Sbjct: 393 CQTKLENAKSTYPRVEEGNLPYLCMDLVYQYTLLVDGFGIYPWQEITLVKKVKYDDALVE 452
Query: 378 AAWPLGSAIEAVSSS 334
AAWPLGSAIEAVSS+
Sbjct: 453 AAWPLGSAIEAVSST 467
>dbj|BAB85978.1| PsAPY2 [Pisum sativum]
Length = 467
Score = 142 bits (358), Expect = 3e-33
Identities = 64/75 (85%), Positives = 72/75 (95%)
Frame = -1
Query: 558 CQTKLGDAKSTYPHIEDGNLPYICMDLVYQYTLLVDGFGIYPWQEVTLVKKVKYDDALVE 379
CQTK +AKSTYP +E+GNLPY+CMDLVYQYTLLVDGFGIYPWQE+TLVKKVKY+DALVE
Sbjct: 393 CQTKFKNAKSTYPRVEEGNLPYLCMDLVYQYTLLVDGFGIYPWQEITLVKKVKYEDALVE 452
Query: 378 AAWPLGSAIEAVSSS 334
AAWPLGSAIEAVS++
Sbjct: 453 AAWPLGSAIEAVSAT 467
>gb|AAG22044.1|AF305783_1 apyrase 2 [Pisum sativum]
Length = 447
Score = 124 bits (310), Expect = 1e-27
Identities = 58/74 (78%), Positives = 67/74 (90%)
Frame = -1
Query: 558 CQTKLGDAKSTYPHIEDGNLPYICMDLVYQYTLLVDGFGIYPWQEVTLVKKVKYDDALVE 379
CQ KL DAKSTYP++E+GNLPY+CMDLVYQYTLLV GFG+ Q++TLVK+VKY D+LVE
Sbjct: 372 CQPKLEDAKSTYPNVEEGNLPYLCMDLVYQYTLLVFGFGLDQMQQITLVKQVKYHDSLVE 431
Query: 378 AAWPLGSAIEAVSS 337
AAWPLGSAIEAVSS
Sbjct: 432 AAWPLGSAIEAVSS 445
>gb|AAF00610.1|AF156781_1 apyrase [Dolichos biflorus]
Length = 467
Score = 118 bits (296), Expect = 5e-26
Identities = 52/74 (70%), Positives = 66/74 (88%)
Frame = -1
Query: 558 CQTKLGDAKSTYPHIEDGNLPYICMDLVYQYTLLVDGFGIYPWQEVTLVKKVKYDDALVE 379
C T+L D KS +P ++DG++PYIC+DLVYQYTLLVDGFGI P QE+TLV++++Y D+LVE
Sbjct: 383 CSTELKDLKSVFPRVKDGDVPYICLDLVYQYTLLVDGFGIDPQQEITLVRQIQYQDSLVE 442
Query: 378 AAWPLGSAIEAVSS 337
AAWPLGSAIEA+SS
Sbjct: 443 AAWPLGSAIEAISS 456
>gb|AAM98186.1| unknown protein [Arabidopsis thaliana]
Length = 472
Score = 117 bits (294), Expect = 8e-26
Identities = 55/76 (72%), Positives = 63/76 (82%)
Frame = -1
Query: 564 KLCQTKLGDAKSTYPHIEDGNLPYICMDLVYQYTLLVDGFGIYPWQEVTLVKKVKYDDAL 385
K C KL + KST+P +E+ NLPY+CMDLVYQYTLL+DGFG+ P Q +TLVKKVKY D
Sbjct: 396 KACSMKLEEGKSTFPLVEEENLPYLCMDLVYQYTLLIDGFGLEPSQTITLVKKVKYGDQA 455
Query: 384 VEAAWPLGSAIEAVSS 337
VEAAWPLGSAIEAVSS
Sbjct: 456 VEAAWPLGSAIEAVSS 471
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 493,936,453
Number of Sequences: 1393205
Number of extensions: 10617447
Number of successful extensions: 27160
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 26525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27143
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21243732558
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
