Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005515A_C01 KMC005515A_c01
(1037 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN88021.1|AF409094_4 unknown [Diachasmimorpha longicaudata e... 36 0.86
gb|AAM44372.1| hypothetical protein [Dictyostelium discoideum] g... 34 4.3
>gb|AAN88021.1|AF409094_4 unknown [Diachasmimorpha longicaudata entomopoxvirus]
Length = 81
Score = 36.2 bits (82), Expect = 0.86
Identities = 19/55 (34%), Positives = 32/55 (57%), Gaps = 1/55 (1%)
Frame = -1
Query: 254 RYFLKTIVCYKLFNYLYSSFLEEFVSHFHFRK-VFLFHSIIYYLLVVIVIWRKKV 93
RYF K +C L N+ +SFL +++ FH R HS IY +L+++ +W + +
Sbjct: 17 RYFSK--MCNLLKNFQENSFLLDYIYGFHHRSHKSSLHSKIYKILLILYVWTENI 69
>gb|AAM44372.1| hypothetical protein [Dictyostelium discoideum]
gi|28828378|gb|AAM09346.2| similar to Plasmodium
falciparum. Hypothetical protein [Dictyostelium
discoideum]
Length = 172
Score = 33.9 bits (76), Expect = 4.3
Identities = 34/104 (32%), Positives = 47/104 (44%), Gaps = 3/104 (2%)
Frame = -1
Query: 428 HSFFDISNLTFVQFSHLEVLIHAYQVQSFM*FL*HLSNALKFAGYCSI**TL*THNWWRY 249
++FFD SN F QF +L L+H Y + + LSN LK + N +Y
Sbjct: 6 NNFFDFSNDQFDQFHNLHQLVHHY-LNYNKKEIHRLSNLLKNES---------SFNLLKY 55
Query: 248 FLKTIVCYKLFNYLYSSFLEEFVSHFHF---RKVFLFHSIIYYL 126
++ Y+L NYLY ++F F F K F F YYL
Sbjct: 56 GNPAVLFYQL-NYLYDYNFDKFNECFQFVPINKKFYF----YYL 94
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 811,388,572
Number of Sequences: 1393205
Number of extensions: 17110624
Number of successful extensions: 41415
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 39652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41397
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 60980933767
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
