Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005501A_C01 KMC005501A_c01
(811 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C96782 unknown protein F22H5.13 [imported] - Arabidopsis th... 163 2e-39
ref|NP_177656.2| unknown protein; protein id: At1g75200.1, suppo... 163 2e-39
gb|AAN65027.1| putative oxidoreductase [Oryza sativa (japonica c... 142 6e-33
emb|CAB75640.1| hypothetical protein L8325.13 [Leishmania major] 103 2e-21
gb|AAH27065.1| Similar to hypothetical protein FLJ10900 [Mus mus... 102 7e-21
>pir||C96782 unknown protein F22H5.13 [imported] - Arabidopsis thaliana
gi|10092280|gb|AAG12693.1|AC025814_17 unknown protein;
42527-45275 [Arabidopsis thaliana]
Length = 654
Score = 163 bits (413), Expect = 2e-39
Identities = 70/88 (79%), Positives = 78/88 (88%)
Frame = -2
Query: 810 GEYEVACEHVHSCCVLLANTKKFKIDGQWYTWIDYEKFHDLVASGETFDSKDYMAVTPSW 631
GEYEVACEH HSCCVLL T+KFK+DG+W+TWIDYEKFHDLVASGE F S DYMA TPSW
Sbjct: 563 GEYEVACEHAHSCCVLLGRTEKFKVDGKWFTWIDYEKFHDLVASGEPFTSTDYMAQTPSW 622
Query: 630 AVYGSEEGGFDPGPLRYRKERHHKSKPQ 547
AVYG++EGGFDPG LRY+KER+H KPQ
Sbjct: 623 AVYGAQEGGFDPGQLRYKKERNHPPKPQ 650
>ref|NP_177656.2| unknown protein; protein id: At1g75200.1, supported by cDNA:
gi_19423974, supported by cDNA: gi_21281260 [Arabidopsis
thaliana] gi|19423975|gb|AAL87267.1| unknown protein
[Arabidopsis thaliana] gi|21281261|gb|AAM45053.1|
unknown protein [Arabidopsis thaliana]
Length = 647
Score = 163 bits (413), Expect = 2e-39
Identities = 70/88 (79%), Positives = 78/88 (88%)
Frame = -2
Query: 810 GEYEVACEHVHSCCVLLANTKKFKIDGQWYTWIDYEKFHDLVASGETFDSKDYMAVTPSW 631
GEYEVACEH HSCCVLL T+KFK+DG+W+TWIDYEKFHDLVASGE F S DYMA TPSW
Sbjct: 556 GEYEVACEHAHSCCVLLGRTEKFKVDGKWFTWIDYEKFHDLVASGEPFTSTDYMAQTPSW 615
Query: 630 AVYGSEEGGFDPGPLRYRKERHHKSKPQ 547
AVYG++EGGFDPG LRY+KER+H KPQ
Sbjct: 616 AVYGAQEGGFDPGQLRYKKERNHPPKPQ 643
>gb|AAN65027.1| putative oxidoreductase [Oryza sativa (japonica cultivar-group)]
Length = 653
Score = 142 bits (358), Expect = 6e-33
Identities = 60/83 (72%), Positives = 71/83 (85%)
Frame = -2
Query: 810 GEYEVACEHVHSCCVLLANTKKFKIDGQWYTWIDYEKFHDLVASGETFDSKDYMAVTPSW 631
G YEVACEH HSCCVLLA KFKI+G+W+TWIDY++FH+LV SG+ F S+DYMA+TPSW
Sbjct: 564 GVYEVACEHAHSCCVLLAKVDKFKINGKWHTWIDYDRFHELVTSGKPFRSQDYMALTPSW 623
Query: 630 AVYGSEEGGFDPGPLRYRKERHH 562
AVYG+EEGGFDP RY+KER H
Sbjct: 624 AVYGAEEGGFDPDQSRYKKERRH 646
>emb|CAB75640.1| hypothetical protein L8325.13 [Leishmania major]
Length = 208
Score = 103 bits (258), Expect = 2e-21
Identities = 49/75 (65%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Frame = -2
Query: 804 YEVACEHVHSCCVLLANTKKFKIDGQWYTWIDYEKFHDLVASGET-FDSKDYMAVTPSWA 628
Y VACEH HSCCVL+A KF DG W+TWIDYE+F+DLV SG T F S DY AVTP+WA
Sbjct: 120 YHVACEHEHSCCVLIA-LDKFFFDGHWHTWIDYERFYDLVESGRTDFTSLDYAAVTPAWA 178
Query: 627 VYGSEEGGFDPGPLR 583
Y S+E GFDP R
Sbjct: 179 TYNSKEKGFDPQQTR 193
>gb|AAH27065.1| Similar to hypothetical protein FLJ10900 [Mus musculus]
Length = 463
Score = 102 bits (254), Expect = 7e-21
Identities = 47/89 (52%), Positives = 63/89 (69%), Gaps = 6/89 (6%)
Frame = -2
Query: 807 EYEVACEHVHSCCVLLANTKKFKIDGQWYTWIDYEKFHDLVASGE------TFDSKDYMA 646
+YEVACEH HS C+L+ + KKFKIDG+W+TWI+Y +F +LV E TF S+DYMA
Sbjct: 371 DYEVACEHEHSNCLLIGH-KKFKIDGEWWTWINYSRFQELVLQYEESGGSKTFSSRDYMA 429
Query: 645 VTPSWAVYGSEEGGFDPGPLRYRKERHHK 559
TP WA++G+ E GFDP RY+++ K
Sbjct: 430 RTPQWALFGARERGFDPKDTRYQRKNKTK 458
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 695,661,837
Number of Sequences: 1393205
Number of extensions: 15657368
Number of successful extensions: 36479
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 35351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36444
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 41456493416
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
