Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005496A_C01 KMC005496A_c01
(875 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T03792 kinesin-related protein tck1 - common tobacco gi|149... 455 e-127
pir||T07397 kinesin heavy chain-like protein (clone PKCBP) - pot... 450 e-125
gb|AAO72660.1| kinesin-like calmodulin-binding protein-like prot... 439 e-122
dbj|BAB11140.1| kinesin-like calmodulin-binding protein [Arabido... 437 e-121
gb|AAL36167.1| putative kinesin calmodulin-binding protein [Arab... 437 e-121
>pir||T03792 kinesin-related protein tck1 - common tobacco
gi|1491931|gb|AAC49393.1| kinesin-like protein
Length = 1265
Score = 455 bits (1170), Expect = e-127
Identities = 221/290 (76%), Positives = 255/290 (87%)
Frame = -2
Query: 874 NYASPTPSTLSMAVPAELAGAVPLIDRFQVDVFLKLMHKQIQSAGKRGFFSKRSVGPQAR 695
N+A PTP+TLS + ELAGA+P IDRFQV+ FLK M KQ+QSAGKRGFF K+SVGPQ R
Sbjct: 45 NFAPPTPTTLSSVLSPELAGAIPYIDRFQVEGFLKAMQKQLQSAGKRGFFLKKSVGPQVR 104
Query: 694 EKYTFEDMLCFQKDPIPTSLLKIDGDSVSRATKLFQIILKYMGIDPSDRVVPVSLDERVE 515
EK+TFEDMLCFQ++PIPTS+LKI+GD V R KLFQ ILKYMGID DR P+SLDER+E
Sbjct: 105 EKFTFEDMLCFQREPIPTSILKINGDLVGRTVKLFQSILKYMGIDSYDRAAPISLDERIE 164
Query: 514 LVGKLYKQSLKRSELRDELFVQISKQTRNNPERQYLIKAWELMYLCSSSMPPSKDIGVYL 335
LVGKL+KQ+LKRSELRDE+F QISKQTRNNPER LIKAWELMYLC+S MPPSK+IG YL
Sbjct: 165 LVGKLFKQALKRSELRDEMFAQISKQTRNNPERHSLIKAWELMYLCASCMPPSKEIGGYL 224
Query: 334 SEYIHSIAHGVATDPEIQALALNTLNALKRSVKAGPRHIIPGREEIEALWNGRKLTTIVF 155
SEYIH++AHG+ TD E+Q A+NTLNALKRS+KAGPRH IPGREEIEAL G+KLTTIVF
Sbjct: 225 SEYIHTVAHGINTDSEVQVYAINTLNALKRSIKAGPRHTIPGREEIEALLTGKKLTTIVF 284
Query: 154 FLDETFEEITYDMSTTVSDAVEELAGLIRLSTYSSLSLCECRKVVTGSKS 5
FLDETFEEITYDM+TTV+DA+EE+AG+I+LS ++S SL ECRKVVTGSKS
Sbjct: 285 FLDETFEEITYDMATTVADAIEEVAGIIKLSAHASFSLFECRKVVTGSKS 334
>pir||T07397 kinesin heavy chain-like protein (clone PKCBP) - potato
gi|1369852|gb|AAB37756.1| kinesin heavy chain-like
protein
Length = 1265
Score = 450 bits (1158), Expect = e-125
Identities = 220/290 (75%), Positives = 253/290 (86%)
Frame = -2
Query: 874 NYASPTPSTLSMAVPAELAGAVPLIDRFQVDVFLKLMHKQIQSAGKRGFFSKRSVGPQAR 695
N+A PTP+TLS + ELAGA+P IDRFQV+ FLK M KQI SA KRGFF K+SVGPQ R
Sbjct: 45 NFAPPTPNTLSSVLSPELAGAIPYIDRFQVEGFLKAMQKQIHSASKRGFFLKKSVGPQVR 104
Query: 694 EKYTFEDMLCFQKDPIPTSLLKIDGDSVSRATKLFQIILKYMGIDPSDRVVPVSLDERVE 515
EK+TFEDMLCFQ++PIPTS+LK++GD +SRA KLFQ ILKYMGID DRV P+SLDER+E
Sbjct: 105 EKFTFEDMLCFQREPIPTSILKLNGDLISRAVKLFQSILKYMGIDSYDRVAPISLDERIE 164
Query: 514 LVGKLYKQSLKRSELRDELFVQISKQTRNNPERQYLIKAWELMYLCSSSMPPSKDIGVYL 335
LVGKL+KQ+LKRSELRDE+F QISKQTRNNPER LIKAWELMYLC+S MPPSK+IG YL
Sbjct: 165 LVGKLFKQALKRSELRDEMFAQISKQTRNNPERHSLIKAWELMYLCASCMPPSKEIGGYL 224
Query: 334 SEYIHSIAHGVATDPEIQALALNTLNALKRSVKAGPRHIIPGREEIEALWNGRKLTTIVF 155
SEYIH++AHG TD E+Q A+NTLNALKRS+KAGPRH IPGREEIEA G+KLTTIVF
Sbjct: 225 SEYIHTVAHGTNTDSEVQVFAINTLNALKRSIKAGPRHTIPGREEIEAHLTGKKLTTIVF 284
Query: 154 FLDETFEEITYDMSTTVSDAVEELAGLIRLSTYSSLSLCECRKVVTGSKS 5
FLDETFEEITYDM+TTV+DA+EE+AG+I+LS + S SL ECRKVVTGSKS
Sbjct: 285 FLDETFEEITYDMATTVADAIEEVAGIIKLSAHVSFSLFECRKVVTGSKS 334
>gb|AAO72660.1| kinesin-like calmodulin-binding protein-like protein [Oryza sativa
(japonica cultivar-group)]
Length = 1226
Score = 439 bits (1130), Expect = e-122
Identities = 222/286 (77%), Positives = 247/286 (85%)
Frame = -2
Query: 859 TPSTLSMAVPAELAGAVPLIDRFQVDVFLKLMHKQIQSAGKRGFFSKRSVGPQAREKYTF 680
TP+TLSM++P ELAGA+PLIDRFQV+ FLK M KQI SAGKRGFFSK+SVGP REK+T
Sbjct: 1 TPTTLSMSIPPELAGAIPLIDRFQVEGFLKAMQKQIHSAGKRGFFSKKSVGPHVREKFTL 60
Query: 679 EDMLCFQKDPIPTSLLKIDGDSVSRATKLFQIILKYMGIDPSDRVVPVSLDERVELVGKL 500
EDMLCFQKDPIPTSLLKI D VSR+ KLF +ILKYMGID +SLDER+ELV KL
Sbjct: 61 EDMLCFQKDPIPTSLLKISSDLVSRSIKLFHVILKYMGIDSP---AIISLDERIELVAKL 117
Query: 499 YKQSLKRSELRDELFVQISKQTRNNPERQYLIKAWELMYLCSSSMPPSKDIGVYLSEYIH 320
YK +LKRSELRDELF QISKQTRNNP+R +LI+AWELMYLC+SSMPPSKDIG YLSEY+H
Sbjct: 118 YKHTLKRSELRDELFAQISKQTRNNPDRAWLIRAWELMYLCASSMPPSKDIGAYLSEYVH 177
Query: 319 SIAHGVATDPEIQALALNTLNALKRSVKAGPRHIIPGREEIEALWNGRKLTTIVFFLDET 140
IAHG TD +++ LALNTLNALKRSVKAGPR IP REEIEAL + RKLTTIVFFLDET
Sbjct: 178 YIAHGATTDSDVRVLALNTLNALKRSVKAGPRVTIPAREEIEALLSSRKLTTIVFFLDET 237
Query: 139 FEEITYDMSTTVSDAVEELAGLIRLSTYSSLSLCECRKVVTGSKSS 2
FEEITYDM+TTV+DAVEELAG+I+LS YSS SL ECRKVV GSKSS
Sbjct: 238 FEEITYDMATTVADAVEELAGIIKLSVYSSFSLFECRKVVNGSKSS 283
>dbj|BAB11140.1| kinesin-like calmodulin-binding protein [Arabidopsis thaliana]
Length = 1260
Score = 437 bits (1124), Expect = e-121
Identities = 219/289 (75%), Positives = 252/289 (86%), Gaps = 1/289 (0%)
Frame = -2
Query: 865 SPTPSTLSMAVPAELAGAVPLIDRFQVDVFLKLMHKQIQSAGKRGFF-SKRSVGPQAREK 689
SP P +++++PAELA A+PLIDRFQV+ FL+LM KQIQSAGKRGFF SK+S G RE+
Sbjct: 48 SPAPQ-VALSIPAELAAAIPLIDRFQVEAFLRLMQKQIQSAGKRGFFYSKKSSGSNVRER 106
Query: 688 YTFEDMLCFQKDPIPTSLLKIDGDSVSRATKLFQIILKYMGIDPSDRVVPVSLDERVELV 509
+TFEDMLCFQKDPIPTSLLKI+ D VSRATKLF +ILKYMG+D SDR P SLDER++LV
Sbjct: 107 FTFEDMLCFQKDPIPTSLLKINSDLVSRATKLFHLILKYMGVDSSDRSTPPSLDERIDLV 166
Query: 508 GKLYKQSLKRSELRDELFVQISKQTRNNPERQYLIKAWELMYLCSSSMPPSKDIGVYLSE 329
GKL+K++LKR ELRDELF QISKQTR+NP+RQYLIKAWELMYLC+SSMPPSKDIG YLSE
Sbjct: 167 GKLFKKTLKRVELRDELFAQISKQTRHNPDRQYLIKAWELMYLCASSMPPSKDIGGYLSE 226
Query: 328 YIHSIAHGVATDPEIQALALNTLNALKRSVKAGPRHIIPGREEIEALWNGRKLTTIVFFL 149
YIH++AH +P+ Q LA+NTL ALKRS+KAGPRH PGREEIEAL GRKLTTIVFFL
Sbjct: 227 YIHNVAHDATIEPDAQVLAVNTLKALKRSIKAGPRHTTPGREEIEALLTGRKLTTIVFFL 286
Query: 148 DETFEEITYDMSTTVSDAVEELAGLIRLSTYSSLSLCECRKVVTGSKSS 2
DETFEEI+YDM+TTVSDAVEELAG I+LS +SS SL ECRKVV+ SKSS
Sbjct: 287 DETFEEISYDMATTVSDAVEELAGTIKLSAFSSFSLFECRKVVSSSKSS 335
>gb|AAL36167.1| putative kinesin calmodulin-binding protein [Arabidopsis thaliana]
Length = 1260
Score = 437 bits (1124), Expect = e-121
Identities = 219/289 (75%), Positives = 252/289 (86%), Gaps = 1/289 (0%)
Frame = -2
Query: 865 SPTPSTLSMAVPAELAGAVPLIDRFQVDVFLKLMHKQIQSAGKRGFF-SKRSVGPQAREK 689
SP P +++++PAELA A+PLIDRFQV+ FL+LM KQIQSAGKRGFF SK+S G RE+
Sbjct: 48 SPAPQ-VALSIPAELAAAIPLIDRFQVEAFLRLMQKQIQSAGKRGFFYSKKSSGSNVRER 106
Query: 688 YTFEDMLCFQKDPIPTSLLKIDGDSVSRATKLFQIILKYMGIDPSDRVVPVSLDERVELV 509
+TFEDMLCFQKDPIPTSLLKI+ D VSRATKLF +ILKYMG+D SDR P SLDER++LV
Sbjct: 107 FTFEDMLCFQKDPIPTSLLKINSDLVSRATKLFHLILKYMGVDSSDRSTPPSLDERIDLV 166
Query: 508 GKLYKQSLKRSELRDELFVQISKQTRNNPERQYLIKAWELMYLCSSSMPPSKDIGVYLSE 329
GKL+K++LKR ELRDELF QISKQTR+NP+RQYLIKAWELMYLC+SSMPPSKDIG YLSE
Sbjct: 167 GKLFKKTLKRVELRDELFAQISKQTRHNPDRQYLIKAWELMYLCASSMPPSKDIGGYLSE 226
Query: 328 YIHSIAHGVATDPEIQALALNTLNALKRSVKAGPRHIIPGREEIEALWNGRKLTTIVFFL 149
YIH++AH +P+ Q LA+NTL ALKRS+KAGPRH PGREEIEAL GRKLTTIVFFL
Sbjct: 227 YIHNVAHDATIEPDAQVLAVNTLKALKRSIKAGPRHTTPGREEIEALLTGRKLTTIVFFL 286
Query: 148 DETFEEITYDMSTTVSDAVEELAGLIRLSTYSSLSLCECRKVVTGSKSS 2
DETFEEI+YDM+TTVSDAVEELAG I+LS +SS SL ECRKVV+ SKSS
Sbjct: 287 DETFEEISYDMATTVSDAVEELAGTIKLSAFSSFSLFECRKVVSSSKSS 335
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 743,065,685
Number of Sequences: 1393205
Number of extensions: 15704802
Number of successful extensions: 38459
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 37073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38375
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 47103382053
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
