Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005464A_C01 KMC005464A_c01
(618 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK62600.1| AT3g62770/F26K9_200 [Arabidopsis thaliana] gi|163... 133 2e-30
dbj|BAB93248.1| P0423A12.19 [Oryza sativa (japonica cultivar-gro... 127 9e-29
pir||T48066 hypothetical protein F26K9.200 - Arabidopsis thalian... 126 3e-28
dbj|BAC42353.1| unknown protein [Arabidopsis thaliana] 107 9e-23
ref|NP_181613.1| hypothetical protein; protein id: At2g40810.1 [... 107 9e-23
>gb|AAK62600.1| AT3g62770/F26K9_200 [Arabidopsis thaliana]
gi|16323362|gb|AAL15394.1| AT3g62770/F26K9_200
[Arabidopsis thaliana]
Length = 425
Score = 133 bits (334), Expect = 2e-30
Identities = 62/89 (69%), Positives = 73/89 (81%)
Frame = -1
Query: 615 ESSPSSPTPGSSLCFIKGVLPKYFSSEWSVAKFHLQEGLQYVVAFGHQKNTIVILGLDGS 436
+++PSSP+ SSL KGVLP+YFSSEWSVA+F L EG QY+ AFGHQKNT+VILG+DGS
Sbjct: 339 DATPSSPS--SSLSLFKGVLPRYFSSEWSVAQFRLVEGTQYIAAFGHQKNTVVILGMDGS 396
Query: 435 FYRCQFDSATGGEMTQLEYYNFLKPEETF 349
FYRCQFD GGEM+QLEY+N LKP F
Sbjct: 397 FYRCQFDPVNGGEMSQLEYHNCLKPPSVF 425
>dbj|BAB93248.1| P0423A12.19 [Oryza sativa (japonica cultivar-group)]
Length = 457
Score = 127 bits (320), Expect = 9e-29
Identities = 58/82 (70%), Positives = 65/82 (78%)
Frame = -1
Query: 606 PSSPTPGSSLCFIKGVLPKYFSSEWSVAKFHLQEGLQYVVAFGHQKNTIVILGLDGSFYR 427
P P SL FIKGVLPKYF SEWSVA+F L EG QY+VAFGH+KNT+ ++G+DGSFYR
Sbjct: 370 PDVPHISPSLSFIKGVLPKYFHSEWSVAQFRLHEGEQYIVAFGHEKNTVAVVGMDGSFYR 429
Query: 426 CQFDSATGGEMTQLEYYNFLKP 361
CQFD GGEM QLE YNFLKP
Sbjct: 430 CQFDPVNGGEMLQLECYNFLKP 451
>pir||T48066 hypothetical protein F26K9.200 - Arabidopsis thaliana
gi|7362757|emb|CAB83127.1| putative protein [Arabidopsis
thaliana]
Length = 432
Score = 126 bits (316), Expect = 3e-28
Identities = 61/89 (68%), Positives = 72/89 (80%)
Frame = -1
Query: 615 ESSPSSPTPGSSLCFIKGVLPKYFSSEWSVAKFHLQEGLQYVVAFGHQKNTIVILGLDGS 436
+++PSSP+ SSL K VLP+YFSSEWSVA+F L EG QY+ AFGHQKNT+VILG+DGS
Sbjct: 347 DATPSSPS--SSLSLFK-VLPRYFSSEWSVAQFRLVEGTQYIAAFGHQKNTVVILGMDGS 403
Query: 435 FYRCQFDSATGGEMTQLEYYNFLKPEETF 349
FYRCQFD GGEM+QLEY+N LKP F
Sbjct: 404 FYRCQFDPVNGGEMSQLEYHNCLKPPSVF 432
>dbj|BAC42353.1| unknown protein [Arabidopsis thaliana]
Length = 393
Score = 107 bits (268), Expect = 9e-23
Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 4/83 (4%)
Frame = -1
Query: 600 SPT----PGSSLCFIKGVLPKYFSSEWSVAKFHLQEGLQYVVAFGHQKNTIVILGLDGSF 433
SPT PGSSL F++GVLPKYFSSEWS A+FH+ E Q+ AFG NT+ I+G+DGSF
Sbjct: 307 SPTIGTNPGSSLSFMRGVLPKYFSSEWSYAQFHVSEVTQFFAAFG-SNNTVAIIGMDGSF 365
Query: 432 YRCQFDSATGGEMTQLEYYNFLK 364
YRC FD GGEM QLEY +F+K
Sbjct: 366 YRCSFDPVNGGEMGQLEYIHFMK 388
>ref|NP_181613.1| hypothetical protein; protein id: At2g40810.1 [Arabidopsis
thaliana] gi|7487233|pir||T00745 hypothetical protein
At2g40810 [imported] - Arabidopsis thaliana
gi|2623295|gb|AAB86441.1| hypothetical protein
[Arabidopsis thaliana]
Length = 369
Score = 107 bits (268), Expect = 9e-23
Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 4/83 (4%)
Frame = -1
Query: 600 SPT----PGSSLCFIKGVLPKYFSSEWSVAKFHLQEGLQYVVAFGHQKNTIVILGLDGSF 433
SPT PGSSL F++GVLPKYFSSEWS A+FH+ E Q+ AFG NT+ I+G+DGSF
Sbjct: 283 SPTIGTNPGSSLSFMRGVLPKYFSSEWSYAQFHVSEVTQFFAAFG-SNNTVAIIGMDGSF 341
Query: 432 YRCQFDSATGGEMTQLEYYNFLK 364
YRC FD GGEM QLEY +F+K
Sbjct: 342 YRCSFDPVNGGEMGQLEYIHFMK 364
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 558,863,310
Number of Sequences: 1393205
Number of extensions: 12349364
Number of successful extensions: 29154
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 28188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29145
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 24733321959
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
