Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005457A_C01 KMC005457A_c01
(613 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO42258.1| putative amino acid acetyltransferase [Arabidopsi... 167 8e-41
ref|NP_568032.1| putative protein; protein id: At4g37670.1 [Arab... 160 2e-38
pir||T04724 hypothetical protein F19F18.160 - Arabidopsis thalia... 160 2e-38
dbj|BAC22279.1| amino acid acetyltransferase(N-acetylglutamate s... 133 2e-30
ref|NP_179875.1| putative amino acid acetyltransferase; protein ... 113 2e-24
>gb|AAO42258.1| putative amino acid acetyltransferase [Arabidopsis thaliana]
Length = 609
Score = 167 bits (424), Expect = 8e-41
Identities = 93/175 (53%), Positives = 114/175 (65%), Gaps = 3/175 (1%)
Frame = +2
Query: 98 SMASSLSSCFTTL--PKPPHFFTFNEPRSSSFRLQP-KLQFKPRSLQSWPLPSQFANRKK 268
+M S S+C+ P+ F F EP S +L P ++ KP P +
Sbjct: 6 AMVVSSSTCYVPFRCPQARKDFAFVEP---SKKLNPNRVLIKPPVYTYSPALTA------ 56
Query: 269 PIQTKCNVFDEEESYYNSMEDKQFVRSFREAWPYLWAYRGSTFVVIISGEIVSGPFLDPI 448
KCN+FD E+ N + DKQFVR FREAWPYLWA+R TFVV ISG+++ GP+ D +
Sbjct: 57 ---AKCNIFDYAETGENLVGDKQFVRWFREAWPYLWAHRSCTFVVTISGDVLDGPYCDLV 113
Query: 449 LKDIAFLHHLGIRFVLVPGTHVQIDKLLAERGSRPKYVGRYRITDEESLEAAMEA 613
LKDIAFLHHLGI+FVLVPGT VQID+LLAERG P YVGRYR+TD SL+AA EA
Sbjct: 114 LKDIAFLHHLGIKFVLVPGTQVQIDQLLAERGREPTYVGRYRVTDSASLQAAKEA 168
>ref|NP_568032.1| putative protein; protein id: At4g37670.1 [Arabidopsis thaliana]
Length = 543
Score = 160 bits (404), Expect = 2e-38
Identities = 96/183 (52%), Positives = 116/183 (62%), Gaps = 13/183 (7%)
Frame = +2
Query: 104 ASSLSSCFTTLPKPPHFFTFNEPRSSSFRLQPKLQFKPRSLQSWPLPSQF---ANRKKPI 274
+SS SS + P+ F ++ SSF+ + KL P+QF + KP+
Sbjct: 9 SSSTSSYYV-----PYHFRQSKSNFSSFKPKNKLN-----------PTQFRFNCSWFKPV 52
Query: 275 QT----KCNVFDEEESYYNSME------DKQFVRSFREAWPYLWAYRGSTFVVIISGEIV 424
+ KCN+FD + +E DKQFVR FREAWPYLWA+RG TFVVIISGEI+
Sbjct: 53 SSITAAKCNMFDYAVTAAGDVEAEHPVDDKQFVRWFREAWPYLWAHRGCTFVVIISGEII 112
Query: 425 SGPFLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLAERGSRPKYVGRYRITDEESLEAA 604
+G D ILKDIAFLHHLGIRFVLVPGT QID+LLAERG YVGRYR+TD SL+AA
Sbjct: 113 AGSSCDAILKDIAFLHHLGIRFVLVPGTQEQIDQLLAERGREATYVGRYRVTDAASLQAA 172
Query: 605 MEA 613
EA
Sbjct: 173 KEA 175
>pir||T04724 hypothetical protein F19F18.160 - Arabidopsis thaliana
gi|4468992|emb|CAB38306.1| putative protein [Arabidopsis
thaliana] gi|7270749|emb|CAB80432.1| putative protein
[Arabidopsis thaliana]
Length = 571
Score = 160 bits (404), Expect = 2e-38
Identities = 96/183 (52%), Positives = 116/183 (62%), Gaps = 13/183 (7%)
Frame = +2
Query: 104 ASSLSSCFTTLPKPPHFFTFNEPRSSSFRLQPKLQFKPRSLQSWPLPSQF---ANRKKPI 274
+SS SS + P+ F ++ SSF+ + KL P+QF + KP+
Sbjct: 9 SSSTSSYYV-----PYHFRQSKSNFSSFKPKNKLN-----------PTQFRFNCSWFKPV 52
Query: 275 QT----KCNVFDEEESYYNSME------DKQFVRSFREAWPYLWAYRGSTFVVIISGEIV 424
+ KCN+FD + +E DKQFVR FREAWPYLWA+RG TFVVIISGEI+
Sbjct: 53 SSITAAKCNMFDYAVTAAGDVEAEHPVDDKQFVRWFREAWPYLWAHRGCTFVVIISGEII 112
Query: 425 SGPFLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLAERGSRPKYVGRYRITDEESLEAA 604
+G D ILKDIAFLHHLGIRFVLVPGT QID+LLAERG YVGRYR+TD SL+AA
Sbjct: 113 AGSSCDAILKDIAFLHHLGIRFVLVPGTQEQIDQLLAERGREATYVGRYRVTDAASLQAA 172
Query: 605 MEA 613
EA
Sbjct: 173 KEA 175
>dbj|BAC22279.1| amino acid acetyltransferase(N-acetylglutamate synthase)-like
protein~contains ESTs AU100734(C12420),C26484(C12420)
[Oryza sativa (japonica cultivar-group)]
Length = 575
Score = 133 bits (335), Expect = 2e-30
Identities = 66/94 (70%), Positives = 79/94 (83%)
Frame = +2
Query: 332 KQFVRSFREAWPYLWAYRGSTFVVIISGEIVSGPFLDPILKDIAFLHHLGIRFVLVPGTH 511
++FV FREAWPY+ +RGSTFVV+IS E+VSGP D IL+DI+ LH LGI+FVLVPGTH
Sbjct: 67 EEFVGFFREAWPYIRGHRGSTFVVVISSEVVSGPHFDGILQDISLLHGLGIQFVLVPGTH 126
Query: 512 VQIDKLLAERGSRPKYVGRYRITDEESLEAAMEA 613
VQIDKLL+ER KYVG+YR+TD +SLEAAMEA
Sbjct: 127 VQIDKLLSER-RMAKYVGQYRVTDSDSLEAAMEA 159
>ref|NP_179875.1| putative amino acid acetyltransferase; protein id: At2g22910.1
[Arabidopsis thaliana] gi|25412149|pir||D84618 probable
amino acid acetyltransferase [imported] - Arabidopsis
thaliana gi|3445208|gb|AAC32438.1| putative amino acid
acetyltransferase [Arabidopsis thaliana]
Length = 620
Score = 113 bits (282), Expect = 2e-24
Identities = 58/102 (56%), Positives = 74/102 (71%), Gaps = 4/102 (3%)
Frame = +2
Query: 320 SMEDKQFVRSFREAWPYLWAYRGSTFVVIISGEIVSGPFLDPIL----KDIAFLHHLGIR 487
++E+ + V REA PY+ +R S FVV++S E++ F I+ +DIAFLHHLGI+
Sbjct: 78 AVEEAELVAVLREAHPYVNLHRDSKFVVMLSAELLDSGFQSEIIITCVQDIAFLHHLGIK 137
Query: 488 FVLVPGTHVQIDKLLAERGSRPKYVGRYRITDEESLEAAMEA 613
FVLVPGT VQID+LLAERG P YVGRYR+TD SL+AA EA
Sbjct: 138 FVLVPGTQVQIDQLLAERGREPTYVGRYRVTDSASLQAAKEA 179
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 562,951,787
Number of Sequences: 1393205
Number of extensions: 13042901
Number of successful extensions: 40121
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 38274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40085
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24568846532
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
