Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005451A_C01 KMC005451A_c01
(606 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA56354.1| NADP dependent malic enzyme [Phaseolus vulgaris] 248 4e-65
pir||DEFBC malate dehydrogenase (oxaloacetate-decarboxylating) (... 248 4e-65
sp|P12628|MAOX_PHAVU NADP-DEPENDENT MALIC ENZYME (NADP-ME) gi|16... 245 4e-64
gb|AAF73006.1|AF262997_1 NADP-dependent malic protein [Ricinus c... 234 5e-61
dbj|BAB20887.1| NADP dependent malic enzyme [Oryza sativa (japon... 233 1e-60
>emb|CAA56354.1| NADP dependent malic enzyme [Phaseolus vulgaris]
Length = 589
Score = 248 bits (633), Expect = 4e-65
Identities = 120/133 (90%), Positives = 128/133 (96%)
Frame = -2
Query: 605 EAYTWSKGKAIFASGSPFDPVKYGGKVYAPGQANNAYIFPGFGLGLIISGAIRVRDEMLL 426
EAYTWSKG+AIFASGSPFDPV+Y GK++ PGQANNAYIFPGFGLGLI+SGAIRVRDEMLL
Sbjct: 456 EAYTWSKGRAIFASGSPFDPVEYEGKLFVPGQANNAYIFPGFGLGLIMSGAIRVRDEMLL 515
Query: 425 AASEALAAQVSQENYDKGLIYPPFPNIRKISAHIAASVAAKVYELGLASHLPRPKDLVKY 246
AASEALAAQVS+ENYDKGLIYPPF NIRKISA+IAA VAAK Y+LGLASHLPRPKDLVKY
Sbjct: 516 AASEALAAQVSEENYDKGLIYPPFTNIRKISANIAAKVAAKAYDLGLASHLPRPKDLVKY 575
Query: 245 AESCMYSPGYRSY 207
AESCMYSPGYRSY
Sbjct: 576 AESCMYSPGYRSY 588
>pir||DEFBC malate dehydrogenase (oxaloacetate-decarboxylating) (NADP) (EC
1.1.1.40) - kidney bean
Length = 589
Score = 248 bits (633), Expect = 4e-65
Identities = 120/133 (90%), Positives = 128/133 (96%)
Frame = -2
Query: 605 EAYTWSKGKAIFASGSPFDPVKYGGKVYAPGQANNAYIFPGFGLGLIISGAIRVRDEMLL 426
EAYTWSKG+AIFASGSPFDPV+Y GK++ PGQANNAYIFPGFGLGLI+SGAIRVRDEMLL
Sbjct: 456 EAYTWSKGRAIFASGSPFDPVEYEGKLFVPGQANNAYIFPGFGLGLIMSGAIRVRDEMLL 515
Query: 425 AASEALAAQVSQENYDKGLIYPPFPNIRKISAHIAASVAAKVYELGLASHLPRPKDLVKY 246
AASEALAAQVS+ENYDKGLIYPPF NIRKISA+IAA VAAK Y+LGLASHLPRPKDLVKY
Sbjct: 516 AASEALAAQVSEENYDKGLIYPPFTNIRKISANIAAKVAAKAYDLGLASHLPRPKDLVKY 575
Query: 245 AESCMYSPGYRSY 207
AESCMYSPGYRSY
Sbjct: 576 AESCMYSPGYRSY 588
>sp|P12628|MAOX_PHAVU NADP-DEPENDENT MALIC ENZYME (NADP-ME) gi|169327|gb|AAA19575.1|
NADP-dependent malic enzyme
Length = 589
Score = 245 bits (625), Expect = 4e-64
Identities = 119/133 (89%), Positives = 127/133 (95%)
Frame = -2
Query: 605 EAYTWSKGKAIFASGSPFDPVKYGGKVYAPGQANNAYIFPGFGLGLIISGAIRVRDEMLL 426
EAYTWSKG+AIFASGSPFDPV+Y GK++ PGQANNAYIFPGFGLGLI+SGAIRVRDEMLL
Sbjct: 456 EAYTWSKGRAIFASGSPFDPVEYEGKLFVPGQANNAYIFPGFGLGLIMSGAIRVRDEMLL 515
Query: 425 AASEALAAQVSQENYDKGLIYPPFPNIRKISAHIAASVAAKVYELGLASHLPRPKDLVKY 246
AASEALAAQVS+ENYDKGLIYPPF NIRKISA+IAA VAAK Y+LGLASHL RPKDLVKY
Sbjct: 516 AASEALAAQVSEENYDKGLIYPPFTNIRKISANIAAKVAAKAYDLGLASHLKRPKDLVKY 575
Query: 245 AESCMYSPGYRSY 207
AESCMYSPGYRSY
Sbjct: 576 AESCMYSPGYRSY 588
>gb|AAF73006.1|AF262997_1 NADP-dependent malic protein [Ricinus communis]
Length = 641
Score = 234 bits (598), Expect = 5e-61
Identities = 114/133 (85%), Positives = 124/133 (92%)
Frame = -2
Query: 605 EAYTWSKGKAIFASGSPFDPVKYGGKVYAPGQANNAYIFPGFGLGLIISGAIRVRDEMLL 426
EAYTWS+G+AIFASGSPF PV+Y GKVY PGQANNAYIFPGFGLGLI+SG IRV D+MLL
Sbjct: 508 EAYTWSQGRAIFASGSPFAPVEYEGKVYVPGQANNAYIFPGFGLGLIMSGTIRVHDDMLL 567
Query: 425 AASEALAAQVSQENYDKGLIYPPFPNIRKISAHIAASVAAKVYELGLASHLPRPKDLVKY 246
AASEALAAQV+QEN+DKGLIYPPF NIRKISA+IAA+VAAK YELGLAS LP+PKDLVKY
Sbjct: 568 AASEALAAQVTQENFDKGLIYPPFTNIRKISANIAANVAAKAYELGLASRLPQPKDLVKY 627
Query: 245 AESCMYSPGYRSY 207
AESCMYSP YRSY
Sbjct: 628 AESCMYSPAYRSY 640
>dbj|BAB20887.1| NADP dependent malic enzyme [Oryza sativa (japonica
cultivar-group)]
Length = 496
Score = 233 bits (594), Expect = 1e-60
Identities = 110/133 (82%), Positives = 123/133 (91%)
Frame = -2
Query: 605 EAYTWSKGKAIFASGSPFDPVKYGGKVYAPGQANNAYIFPGFGLGLIISGAIRVRDEMLL 426
+AYTWSKG+A+FASGSPFDPV+Y GK+Y PGQANNAYIFPGFGLG+++SGAIRV D+MLL
Sbjct: 363 QAYTWSKGRAVFASGSPFDPVEYDGKIYVPGQANNAYIFPGFGLGVVMSGAIRVHDDMLL 422
Query: 425 AASEALAAQVSQENYDKGLIYPPFPNIRKISAHIAASVAAKVYELGLASHLPRPKDLVKY 246
AASEALA QV+QEN+DKGL YPPF NIRKISAHIAA+VAAK YELGLAS PRPKDLVKY
Sbjct: 423 AASEALAQQVTQENFDKGLTYPPFSNIRKISAHIAANVAAKAYELGLASRRPRPKDLVKY 482
Query: 245 AESCMYSPGYRSY 207
AESCMYSP YR+Y
Sbjct: 483 AESCMYSPLYRNY 495
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 529,208,650
Number of Sequences: 1393205
Number of extensions: 11700652
Number of successful extensions: 34448
Number of sequences better than 10.0: 286
Number of HSP's better than 10.0 without gapping: 32173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34380
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23997478008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
