Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005416A_C01 KMC005416A_c01
(801 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO33591.1|AF479309_1 putative early light induced protein [A... 280 2e-74
gb|AAK63815.1|AF383622_1 early light inducible protein [Medicago... 274 1e-72
pir||JC5876 early light-inducible protein precursor - soybean gi... 264 1e-69
sp|P11432|ELI_PEA Early light-induced protein, chloroplast precu... 263 3e-69
pir||S01056 early light-induced protein precursor - garden pea 258 9e-68
>gb|AAO33591.1|AF479309_1 putative early light induced protein [Arachis hypogaea]
Length = 189
Score = 280 bits (715), Expect = 2e-74
Identities = 142/188 (75%), Positives = 162/188 (85%)
Frame = +2
Query: 119 AMQSIISSPMIRMTTRSRVNQFTTPAVYMPSLRRNATLRVRSMAEGEPKEQPIEPVTSAS 298
AMQSI++SPM R +RSRVNQF PA+YMP++RRNA+L VRSMAE E KEQ EP S
Sbjct: 7 AMQSILASPMTRTPSRSRVNQFGVPALYMPNMRRNASLSVRSMAEEEQKEQSTEPT---S 63
Query: 299 PVTPSPPPPPPKPRAPKVSTKFSDVMAFGGPAPERINGRLAMIGFVAAMAVEVARGQGVF 478
PVTP PPP P+PR+PK+STKFSDV+AF GPAPERINGRLAMIGFVAA+AVE++ GQ +
Sbjct: 64 PVTP--PPPKPQPRSPKMSTKFSDVLAFSGPAPERINGRLAMIGFVAALAVELSNGQDLL 121
Query: 479 EQISDGGVPWFLGTSVVFTLASLVPLFQGVSVESKSQGLMTSDAELWNGRLAMLGLIALA 658
QIS+GG+PWFLGTSVV +LASL+PLFQGVSVESKS G M+SDAELWNGR AMLGLIALA
Sbjct: 122 SQISNGGIPWFLGTSVVLSLASLIPLFQGVSVESKSGGFMSSDAELWNGRFAMLGLIALA 181
Query: 659 FTEYVKGG 682
FTEYVKGG
Sbjct: 182 FTEYVKGG 189
>gb|AAK63815.1|AF383622_1 early light inducible protein [Medicago sativa]
Length = 199
Score = 274 bits (700), Expect = 1e-72
Identities = 139/197 (70%), Positives = 165/197 (83%), Gaps = 4/197 (2%)
Frame = +2
Query: 113 VAAMQSIISSPMIRMTTRSRVNQFTT-PAVYMPSLRRNATLRVRSMAEGEPKEQP---IE 280
V++ QSI+SS M +++R RVNQF P+VYMPS RRNA+L+VRSMAE KEQP ++
Sbjct: 3 VSSCQSIMSSSMTSISSRPRVNQFNNIPSVYMPSFRRNASLKVRSMAEEGQKEQPKVPVD 62
Query: 281 PVTSASPVTPSPPPPPPKPRAPKVSTKFSDVMAFGGPAPERINGRLAMIGFVAAMAVEVA 460
P+T S TP P P P R+PK+STKFSD+MAFGGPAPERINGRLAMIGFVAAM VE+A
Sbjct: 63 PITPPSAPTPPPQPQPTYTRSPKMSTKFSDLMAFGGPAPERINGRLAMIGFVAAMGVEIA 122
Query: 461 RGQGVFEQISDGGVPWFLGTSVVFTLASLVPLFQGVSVESKSQGLMTSDAELWNGRLAML 640
GQG+F+QIS GG+PWFLGTSV+ +LASL+P FQGVSVESKS+G+M+SDAELWNGR+AML
Sbjct: 123 NGQGLFDQISGGGIPWFLGTSVLLSLASLIPFFQGVSVESKSKGVMSSDAELWNGRIAML 182
Query: 641 GLIALAFTEYVKGGTLV 691
GLIALAFTEYVKG LV
Sbjct: 183 GLIALAFTEYVKGTALV 199
>pir||JC5876 early light-inducible protein precursor - soybean
gi|1778823|gb|AAC16403.1| early light-induced protein
[Glycine max]
Length = 192
Score = 264 bits (675), Expect = 1e-69
Identities = 145/196 (73%), Positives = 164/196 (82%), Gaps = 5/196 (2%)
Frame = +2
Query: 119 AMQSIISSPMIRMTTRSRVNQFTTPAVYMPSLRRNATLRVRSMAEGEPKEQPIEPVTSAS 298
AMQSI+++P+IR+++ SRVNQF PA++M RRN LRVRSMA+ +EQP EP A
Sbjct: 7 AMQSILANPLIRISSGSRVNQFGVPALHM---RRNVGLRVRSMAK---EEQPSEP---AI 57
Query: 299 PVTPSPPPPPPKPR-----APKVSTKFSDVMAFGGPAPERINGRLAMIGFVAAMAVEVAR 463
PVTP PP PKP+ +PKVSTKFSDV+AF GPAPERINGRLAMIGFVAAMAVEVA
Sbjct: 58 PVTP-PPSVEPKPQPVSAPSPKVSTKFSDVLAFSGPAPERINGRLAMIGFVAAMAVEVAI 116
Query: 464 GQGVFEQISDGGVPWFLGTSVVFTLASLVPLFQGVSVESKSQGLMTSDAELWNGRLAMLG 643
GQGV EQIS+GG+PWFLGTSVV TLASL+PLFQGVSVESKS+G M+SDAELWNGR AMLG
Sbjct: 117 GQGVLEQISNGGIPWFLGTSVVLTLASLIPLFQGVSVESKSKGFMSSDAELWNGRFAMLG 176
Query: 644 LIALAFTEYVKGGTLV 691
LIALAFTEYVKG TLV
Sbjct: 177 LIALAFTEYVKGSTLV 192
>sp|P11432|ELI_PEA Early light-induced protein, chloroplast precursor (ELIP)
gi|20711|emb|CAA29399.1| ELI protein [Pisum sativum]
Length = 196
Score = 263 bits (671), Expect = 3e-69
Identities = 131/194 (67%), Positives = 161/194 (82%), Gaps = 1/194 (0%)
Frame = +2
Query: 113 VAAMQSIISSPMIRMTTRSRVNQFTT-PAVYMPSLRRNATLRVRSMAEGEPKEQPIEPVT 289
V++ QSI+S+ M +++RSRVNQFT P+VY+P+LRRN +L+VRSMAEGEPKEQ V
Sbjct: 3 VSSCQSIMSNSMTNISSRSRVNQFTNIPSVYIPTLRRNVSLKVRSMAEGEPKEQSKVAVD 62
Query: 290 SASPVTPSPPPPPPKPRAPKVSTKFSDVMAFGGPAPERINGRLAMIGFVAAMAVEVARGQ 469
+P +P P P R PK+STKFSD+MAF GPAPERINGRLAMIGFVAAM VE+A+GQ
Sbjct: 63 PTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQ 122
Query: 470 GVFEQISDGGVPWFLGTSVVFTLASLVPLFQGVSVESKSQGLMTSDAELWNGRLAMLGLI 649
G+ EQ+S GGV WFLGTSV+ +LASL+P FQGVSVESKS+ +M+SDAE WNGR+AMLGL+
Sbjct: 123 GLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLV 182
Query: 650 ALAFTEYVKGGTLV 691
ALAFTE+VKG +LV
Sbjct: 183 ALAFTEFVKGTSLV 196
>pir||S01056 early light-induced protein precursor - garden pea
Length = 196
Score = 258 bits (658), Expect = 9e-68
Identities = 130/194 (67%), Positives = 160/194 (82%), Gaps = 1/194 (0%)
Frame = +2
Query: 113 VAAMQSIISSPMIRMTTRSRVNQFTT-PAVYMPSLRRNATLRVRSMAEGEPKEQPIEPVT 289
V++ QSI+S+ M +++RSRVNQFT P+VY+P+LRRN +L+VRSMAEGEPKEQ V
Sbjct: 3 VSSCQSIMSNSMTNISSRSRVNQFTNIPSVYIPTLRRNVSLKVRSMAEGEPKEQSKVAVD 62
Query: 290 SASPVTPSPPPPPPKPRAPKVSTKFSDVMAFGGPAPERINGRLAMIGFVAAMAVEVARGQ 469
+P +P P P R PK+STKFSD+MAF GPAPERINGRLAMIGFVAAM VE+A+GQ
Sbjct: 63 PTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQ 122
Query: 470 GVFEQISDGGVPWFLGTSVVFTLASLVPLFQGVSVESKSQGLMTSDAELWNGRLAMLGLI 649
G+ EQ+S GGV FLGTSV+ +LASL+P FQGVSVESKS+ +M+SDAE WNGR+AMLGL+
Sbjct: 123 GLSEQLSGGGVAGFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLV 182
Query: 650 ALAFTEYVKGGTLV 691
ALAFTE+VKG +LV
Sbjct: 183 ALAFTEFVKGTSLV 196
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 760,165,026
Number of Sequences: 1393205
Number of extensions: 19657201
Number of successful extensions: 236714
Number of sequences better than 10.0: 1328
Number of HSP's better than 10.0 without gapping: 91913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175775
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 40616159090
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
