Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005397A_C01 KMC005397A_c01
(643 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC53928.1| beta-1,3-glucanase-like protein [Nicotiana tabacum] 262 3e-69
dbj|BAB17320.1| elicitor inducible beta-1,3-glucanase Nt-SubE76 ... 261 4e-69
ref|NP_568822.1| glycosyl hydrolase family 17; protein id: At5g5... 258 5e-68
dbj|BAB08587.1| beta-1,3-glucanase-like protein [Arabidopsis tha... 258 5e-68
gb|AAL77689.1| AT5g55180/MCO15_13 [Arabidopsis thaliana] 257 1e-67
>dbj|BAC53928.1| beta-1,3-glucanase-like protein [Nicotiana tabacum]
Length = 358
Score = 262 bits (669), Expect = 3e-69
Identities = 134/197 (68%), Positives = 162/197 (82%)
Frame = +1
Query: 52 MASLAFSSSFFFMLFLSLSASSSEAGSIGINYGRIANDLPQPEKVVELLKAQGLNRVKLY 231
MA+ S F + LS++ S GSIGINYGRIAN+LP P +VV+LLK QG+NRVKLY
Sbjct: 1 MATFTLLSLFILLSLLSVAHS----GSIGINYGRIANNLPPPAQVVQLLKTQGVNRVKLY 56
Query: 232 DTDATVLTALANSDIKVVVAMPNELLSSAAADQSFTDAWVKANISSYHPATQIEAIAVGN 411
DTD+ VLTAL+ S+I V VA+PNE L+ AA QSFTD+WV++NI +Y+P TQIE+IAVGN
Sbjct: 57 DTDSNVLTALSGSNISVTVALPNEQLADAAGKQSFTDSWVQSNILTYYPKTQIESIAVGN 116
Query: 412 EVFVDPKNTTKFLVAAMKNVHASLTKQGLDSAIKISSPVALSALQNSYPASAGSFKTELI 591
EVFVDPKNTTKFLV AMKN++ASL K G+ +IK+SSPVALSAL NSYP+SAGSFK +L+
Sbjct: 117 EVFVDPKNTTKFLVPAMKNMYASLVKYGVAQSIKVSSPVALSALGNSYPSSAGSFKPDLV 176
Query: 592 EPVIKPMLDFLRQTGSY 642
EPVIKPML FL+QTGSY
Sbjct: 177 EPVIKPMLSFLKQTGSY 193
>dbj|BAB17320.1| elicitor inducible beta-1,3-glucanase Nt-SubE76 [Nicotiana tabacum]
Length = 467
Score = 261 bits (668), Expect = 4e-69
Identities = 134/197 (68%), Positives = 161/197 (81%)
Frame = +1
Query: 52 MASLAFSSSFFFMLFLSLSASSSEAGSIGINYGRIANDLPQPEKVVELLKAQGLNRVKLY 231
MA+ S F + LS++ S GSIGINYGRIAN+LP P +VV+LLK QG+NR+KLY
Sbjct: 1 MATFTLPSLFILLSLLSVAHS----GSIGINYGRIANNLPSPAQVVQLLKTQGVNRIKLY 56
Query: 232 DTDATVLTALANSDIKVVVAMPNELLSSAAADQSFTDAWVKANISSYHPATQIEAIAVGN 411
DTD+ VLTAL+ S+I V VA+PNE LS AA QSFTD+WV++NI +Y+P T IE+IAVGN
Sbjct: 57 DTDSNVLTALSGSNISVTVALPNEQLSDAAEKQSFTDSWVQSNILTYYPKTLIESIAVGN 116
Query: 412 EVFVDPKNTTKFLVAAMKNVHASLTKQGLDSAIKISSPVALSALQNSYPASAGSFKTELI 591
EVFVDPKNTTKFLV AMKNV+ASL K G+ +IK+SSPVALSAL NSYP+SAGSFK +L+
Sbjct: 117 EVFVDPKNTTKFLVPAMKNVYASLVKYGVAESIKVSSPVALSALGNSYPSSAGSFKPDLV 176
Query: 592 EPVIKPMLDFLRQTGSY 642
EPVIKPML FL+QTGSY
Sbjct: 177 EPVIKPMLSFLKQTGSY 193
>ref|NP_568822.1| glycosyl hydrolase family 17; protein id: At5g55180.1, supported by
cDNA: 7119., supported by cDNA: gi_18700154 [Arabidopsis
thaliana]
Length = 460
Score = 258 bits (659), Expect = 5e-68
Identities = 130/183 (71%), Positives = 155/183 (84%)
Frame = +1
Query: 94 FLSLSASSSEAGSIGINYGRIANDLPQPEKVVELLKAQGLNRVKLYDTDATVLTALANSD 273
F ++ + +++G IG+NYGRIA++LP PEKVVELLK QG+NR+KLYDT+ TVLTALANS
Sbjct: 14 FSAIPFTYADSGMIGVNYGRIADNLPAPEKVVELLKTQGINRIKLYDTETTVLTALANSG 73
Query: 274 IKVVVAMPNELLSSAAADQSFTDAWVKANISSYHPATQIEAIAVGNEVFVDPKNTTKFLV 453
IKVVV++PNE L+SAAADQS+TD WV+ NI Y PAT IEAIAVGNEVFVDP+NTT +LV
Sbjct: 74 IKVVVSLPNENLASAAADQSYTDTWVQDNIKKYIPATDIEAIAVGNEVFVDPRNTTTYLV 133
Query: 454 AAMKNVHASLTKQGLDSAIKISSPVALSALQNSYPASAGSFKTELIEPVIKPMLDFLRQT 633
AMKNV +SL K LD +IKISSP+ALSAL +SYP SAGSFK ELIEPVIKPMLD LR+T
Sbjct: 134 PAMKNVQSSLVKFNLDKSIKISSPIALSALASSYPPSAGSFKPELIEPVIKPMLDLLRKT 193
Query: 634 GSY 642
S+
Sbjct: 194 SSH 196
>dbj|BAB08587.1| beta-1,3-glucanase-like protein [Arabidopsis thaliana]
Length = 471
Score = 258 bits (659), Expect = 5e-68
Identities = 130/183 (71%), Positives = 155/183 (84%)
Frame = +1
Query: 94 FLSLSASSSEAGSIGINYGRIANDLPQPEKVVELLKAQGLNRVKLYDTDATVLTALANSD 273
F ++ + +++G IG+NYGRIA++LP PEKVVELLK QG+NR+KLYDT+ TVLTALANS
Sbjct: 14 FSAIPFTYADSGMIGVNYGRIADNLPAPEKVVELLKTQGINRIKLYDTETTVLTALANSG 73
Query: 274 IKVVVAMPNELLSSAAADQSFTDAWVKANISSYHPATQIEAIAVGNEVFVDPKNTTKFLV 453
IKVVV++PNE L+SAAADQS+TD WV+ NI Y PAT IEAIAVGNEVFVDP+NTT +LV
Sbjct: 74 IKVVVSLPNENLASAAADQSYTDTWVQDNIKKYIPATDIEAIAVGNEVFVDPRNTTTYLV 133
Query: 454 AAMKNVHASLTKQGLDSAIKISSPVALSALQNSYPASAGSFKTELIEPVIKPMLDFLRQT 633
AMKNV +SL K LD +IKISSP+ALSAL +SYP SAGSFK ELIEPVIKPMLD LR+T
Sbjct: 134 PAMKNVQSSLVKFNLDKSIKISSPIALSALASSYPPSAGSFKPELIEPVIKPMLDLLRKT 193
Query: 634 GSY 642
S+
Sbjct: 194 SSH 196
>gb|AAL77689.1| AT5g55180/MCO15_13 [Arabidopsis thaliana]
Length = 460
Score = 257 bits (656), Expect = 1e-67
Identities = 129/183 (70%), Positives = 155/183 (84%)
Frame = +1
Query: 94 FLSLSASSSEAGSIGINYGRIANDLPQPEKVVELLKAQGLNRVKLYDTDATVLTALANSD 273
F ++ + +++G IG+NYGRIA++LP PEKVVELLK QG+NR+KLYDT+ TVLT+LANS
Sbjct: 14 FSAIPFTYADSGMIGVNYGRIADNLPAPEKVVELLKTQGINRIKLYDTETTVLTSLANSG 73
Query: 274 IKVVVAMPNELLSSAAADQSFTDAWVKANISSYHPATQIEAIAVGNEVFVDPKNTTKFLV 453
IKVVV++PNE L+SAAADQS+TD WV+ NI Y PAT IEAIAVGNEVFVDP+NTT +LV
Sbjct: 74 IKVVVSLPNENLASAAADQSYTDTWVQDNIKKYIPATDIEAIAVGNEVFVDPRNTTTYLV 133
Query: 454 AAMKNVHASLTKQGLDSAIKISSPVALSALQNSYPASAGSFKTELIEPVIKPMLDFLRQT 633
AMKNV +SL K LD +IKISSP+ALSAL +SYP SAGSFK ELIEPVIKPMLD LR+T
Sbjct: 134 PAMKNVQSSLVKFNLDKSIKISSPIALSALASSYPPSAGSFKPELIEPVIKPMLDLLRKT 193
Query: 634 GSY 642
S+
Sbjct: 194 SSH 196
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.317 0.130 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 637,018,140
Number of Sequences: 1393205
Number of extensions: 18149583
Number of successful extensions: 290310
Number of sequences better than 10.0: 9037
Number of HSP's better than 10.0 without gapping: 106734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199877
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27007650415
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
