Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005395A_C01 KMC005395A_c01
(535 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199776.1| xylulose kinase; protein id: At5g49650.1, suppo... 202 3e-51
dbj|BAA97229.1| xylulose kinase [Arabidopsis thaliana] 202 3e-51
dbj|BAC16466.1| putative xylulose kinase [Oryza sativa (japonica... 190 1e-47
gb|AAH25442.1| Similar to xylulokinase homolog (H. influenzae) [... 68 6e-11
gb|AAH26406.1| Similar to xylulokinase homolog (H. influenzae) [... 68 6e-11
>ref|NP_199776.1| xylulose kinase; protein id: At5g49650.1, supported by cDNA:
gi_15292818 [Arabidopsis thaliana]
gi|15292819|gb|AAK92778.1| putative xylulose kinase
[Arabidopsis thaliana] gi|23296764|gb|AAN13165.1|
putative xylulose kinase [Arabidopsis thaliana]
Length = 558
Score = 202 bits (513), Expect = 3e-51
Identities = 98/128 (76%), Positives = 110/128 (85%)
Frame = -1
Query: 535 EGQFLSMRAHAERFGMPSPPKRIIATGGASANHDILSSIASIFGCDVYTVQRPDSASLGA 356
EGQFLS RAH ERFGMPSPP RIIATGGASAN +ILS I++IFGCDVYTVQRPDSASLGA
Sbjct: 429 EGQFLSKRAHTERFGMPSPPLRIIATGGASANENILSLISAIFGCDVYTVQRPDSASLGA 488
Query: 355 ALRAAHGWLCNKKGGFLPISDMYMDKLEKTSLSCKLSVHAGDQELVNKYAAYMKKRIEIE 176
ALRAAHGWLCNKKG F+PIS++Y KLE TSL+CKL V AGD + + Y MKKR+EIE
Sbjct: 489 ALRAAHGWLCNKKGSFVPISNLYEGKLETTSLNCKLKVKAGDANIASTYGLLMKKRMEIE 548
Query: 175 NRLVQKLG 152
N+LV+KLG
Sbjct: 549 NKLVEKLG 556
>dbj|BAA97229.1| xylulose kinase [Arabidopsis thaliana]
Length = 563
Score = 202 bits (513), Expect = 3e-51
Identities = 98/128 (76%), Positives = 110/128 (85%)
Frame = -1
Query: 535 EGQFLSMRAHAERFGMPSPPKRIIATGGASANHDILSSIASIFGCDVYTVQRPDSASLGA 356
EGQFLS RAH ERFGMPSPP RIIATGGASAN +ILS I++IFGCDVYTVQRPDSASLGA
Sbjct: 434 EGQFLSKRAHTERFGMPSPPLRIIATGGASANENILSLISAIFGCDVYTVQRPDSASLGA 493
Query: 355 ALRAAHGWLCNKKGGFLPISDMYMDKLEKTSLSCKLSVHAGDQELVNKYAAYMKKRIEIE 176
ALRAAHGWLCNKKG F+PIS++Y KLE TSL+CKL V AGD + + Y MKKR+EIE
Sbjct: 494 ALRAAHGWLCNKKGSFVPISNLYEGKLETTSLNCKLKVKAGDANIASTYGLLMKKRMEIE 553
Query: 175 NRLVQKLG 152
N+LV+KLG
Sbjct: 554 NKLVEKLG 561
>dbj|BAC16466.1| putative xylulose kinase [Oryza sativa (japonica cultivar-group)]
gi|27261103|dbj|BAC45216.1| putative xylulose kinase
[Oryza sativa (japonica cultivar-group)]
Length = 562
Score = 190 bits (482), Expect = 1e-47
Identities = 95/133 (71%), Positives = 108/133 (80%), Gaps = 4/133 (3%)
Frame = -1
Query: 535 EGQFLSMRAHAERFGMPSPPKRIIATGGASANHDILSSIASIFGCDVYTVQRPDSASLGA 356
EGQ LSMR HAERFGMP+PPKRIIATGGAS+N IL SIA IFGC V+TVQRPDSASLGA
Sbjct: 429 EGQLLSMRGHAERFGMPNPPKRIIATGGASSNERILHSIAQIFGCPVFTVQRPDSASLGA 488
Query: 355 ALRAAHGWLCNKKGGFLPISDMYMDKLEKTSLSCKLSVHAG----DQELVNKYAAYMKKR 188
ALRAAHGWLCN++G F+PIS MY LEKTSL KL+V G D+EL+ KY M+KR
Sbjct: 489 ALRAAHGWLCNEEGSFVPISCMYQGNLEKTSLGAKLAVSTGEGVEDKELLEKYTVLMRKR 548
Query: 187 IEIENRLVQKLGR 149
+EIE RLV+K+GR
Sbjct: 549 MEIERRLVEKIGR 561
>gb|AAH25442.1| Similar to xylulokinase homolog (H. influenzae) [Mus musculus]
Length = 542
Score = 68.2 bits (165), Expect = 6e-11
Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = -1
Query: 535 EGQFLSMRAHAERFGMPSPPK-RIIATGGASANHDILSSIASIFGCDVYTVQRPDSASLG 359
EGQF++ R HAE G PK +I+ATGGAS N DIL +A +FG VY + SA +G
Sbjct: 419 EGQFMAKRIHAEGLGYRVMPKTKILATGGASHNKDILQVLADVFGAPVYVIDTTSSACVG 478
Query: 358 AALRAAHG 335
+A RA HG
Sbjct: 479 SAYRAFHG 486
>gb|AAH26406.1| Similar to xylulokinase homolog (H. influenzae) [Mus musculus]
Length = 196
Score = 68.2 bits (165), Expect = 6e-11
Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = -1
Query: 535 EGQFLSMRAHAERFGMPSPPK-RIIATGGASANHDILSSIASIFGCDVYTVQRPDSASLG 359
EGQF++ R HAE G PK +I+ATGGAS N DIL +A +FG VY + SA +G
Sbjct: 73 EGQFMAKRIHAEGLGYRVMPKTKILATGGASHNKDILQVLADVFGAPVYVIDTTSSACVG 132
Query: 358 AALRAAHG 335
+A RA HG
Sbjct: 133 SAYRAFHG 140
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 425,100,839
Number of Sequences: 1393205
Number of extensions: 8664758
Number of successful extensions: 28979
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 28337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28966
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
