>KMC005387A_C01 KMC005387A_c01
ccttttttttaagtggaggggtggggtcatattacaacataactagcatttgcatatgca
aattagccacaatGAACAAATGAACTAATAATTATAAAAACTGAGTTAGTTACAACATGA
TTAGGCAAATAAAAAAAACATGCCTAAAGCAACGCAACCCAATTAGTAGAAACCCAATTA
CAAAGATGAAAATCACATCTTTCTTTAAACAAAACAAGCACACACGTATACACTCACTCA
CAACAAGAATATGATAAAACTCACGTGTGTGGTGGGAAACTTAGTCAGTTAATTTCACTC
CTACACTAGAGTCATCTGGTCCAGCAAGCACCACATTGCAATCAAGAGCATATTGTCTGG
CAATCATGATGGCTACATTTCTTTCTTTCTCTGATGCAAAGGTTAACACAAATGATAGGC
CCTTTCGAGCTTGCCAAAACAGTGCCTTCGCTGCATGGCTGGCATCCCCTCTAACTCCAC
ATAGCTGCATGGATGGGGAGTAAATCTCTCTAGCTTTTGTAATCCAACCTCTACATAGCT
TTATCCTCATTCTCCCC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC005387A_C01 KMC005387A_c01
         (557 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAC43120.1| unknown protein [Arabidopsis thaliana] gi|290288...   120  9e-27
ref|NP_180245.1| hypothetical protein; protein id: At2g26770.1 [...   116  2e-25
ref|NP_191207.1| putative protein; protein id: At3g56480.1 [Arab...   112  2e-24
dbj|BAB92273.1| P0034E02.39 [Oryza sativa (japonica cultivar-gro...   109  2e-23
ref|NP_181614.1| hypothetical protein; protein id: At2g40820.1 [...   108  6e-23

>dbj|BAC43120.1| unknown protein [Arabidopsis thaliana] gi|29028898|gb|AAO64828.1|
           At3g56480 [Arabidopsis thaliana]
          Length = 490

 Score =  120 bits (302), Expect = 9e-27
 Identities = 56/82 (68%), Positives = 65/82 (78%)
 Frame = -2

Query: 556 GRMRIKLCRGWITKAREIYSPSMQLCGVRGDASHAAKALFWQARKGLSFVLTFASEKERN 377
           G+ RIKL RGWITKARE+YS SMQLCGVRG+     KA+FWQ RK L+F+LTF SE ERN
Sbjct: 409 GKTRIKLSRGWITKARELYSTSMQLCGVRGNIKAPTKAVFWQPRKSLTFILTFESEHERN 468

Query: 376 VAIMIARQYALDCNVVLAGPDD 311
            AI +AR+YA DC+V L GPDD
Sbjct: 469 AAIALARKYAFDCSVTLLGPDD 490

>ref|NP_180245.1| hypothetical protein; protein id: At2g26770.1 [Arabidopsis
           thaliana] gi|25370573|pir||F84664 hypothetical protein
           At2g26770 [imported] - Arabidopsis thaliana
           gi|2760844|gb|AAB95312.1| hypothetical protein
           [Arabidopsis thaliana] gi|22531022|gb|AAM97015.1|
           unknown protein [Arabidopsis thaliana]
           gi|23197970|gb|AAN15512.1| unknown protein [Arabidopsis
           thaliana] gi|26452697|dbj|BAC43431.1| unknown protein
           [Arabidopsis thaliana]
          Length = 496

 Score =  116 bits (291), Expect = 2e-25
 Identities = 53/82 (64%), Positives = 68/82 (82%)
 Frame = -2

Query: 556 GRMRIKLCRGWITKAREIYSPSMQLCGVRGDASHAAKALFWQARKGLSFVLTFASEKERN 377
           G+MRIKLC+G    A+E YS +MQLCGVRG  + AA+AL+WQA+KG+SFV+ F SE+ERN
Sbjct: 407 GKMRIKLCKGKTVIAKEYYSSAMQLCGVRGGGNAAAQALYWQAKKGVSFVIAFESERERN 466

Query: 376 VAIMIARQYALDCNVVLAGPDD 311
            AIM+AR++A DCNV LAGP+D
Sbjct: 467 AAIMLARRFACDCNVTLAGPED 488

>ref|NP_191207.1| putative protein; protein id: At3g56480.1 [Arabidopsis thaliana]
           gi|11358381|pir||T49049 hypothetical protein T5P19.130 -
           Arabidopsis thaliana gi|7594526|emb|CAB88051.1| putative
           protein [Arabidopsis thaliana]
          Length = 499

 Score =  112 bits (281), Expect = 2e-24
 Identities = 52/79 (65%), Positives = 62/79 (77%)
 Frame = -2

Query: 556 GRMRIKLCRGWITKAREIYSPSMQLCGVRGDASHAAKALFWQARKGLSFVLTFASEKERN 377
           G+ RIKL RGWITKARE+YS SMQLCGVRG+     KA+FWQ RK L+F+LTF SE ERN
Sbjct: 409 GKTRIKLSRGWITKARELYSTSMQLCGVRGNIKAPTKAVFWQPRKSLTFILTFESEHERN 468

Query: 376 VAIMIARQYALDCNVVLAG 320
            AI +AR+YA DC+V + G
Sbjct: 469 AAIALARKYAFDCSVYITG 487

>dbj|BAB92273.1| P0034E02.39 [Oryza sativa (japonica cultivar-group)]
          Length = 493

 Score =  109 bits (273), Expect = 2e-23
 Identities = 49/82 (59%), Positives = 65/82 (78%)
 Frame = -2

Query: 556 GRMRIKLCRGWITKAREIYSPSMQLCGVRGDASHAAKALFWQARKGLSFVLTFASEKERN 377
           G+MRIKL +GW TKARE YS +M+LCG RG  + AA A+FWQARKGLS+ L F ++++RN
Sbjct: 406 GKMRIKLRKGWSTKARESYSTTMKLCGSRGGGNAAATAVFWQARKGLSYTLAFETDRDRN 465

Query: 376 VAIMIARQYALDCNVVLAGPDD 311
            AIM+AR++A +CN+ L GP D
Sbjct: 466 AAIMLARKFASNCNITLTGPGD 487

>ref|NP_181614.1| hypothetical protein; protein id: At2g40820.1 [Arabidopsis
           thaliana] gi|7487240|pir||T00746 hypothetical protein
           At2g40820 [imported] - Arabidopsis thaliana
           gi|2623296|gb|AAB86442.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 945

 Score =  108 bits (269), Expect = 6e-23
 Identities = 57/93 (61%), Positives = 65/93 (69%), Gaps = 18/93 (19%)
 Frame = -2

Query: 556 GRMRIKLCRGWITKAREIYSPSMQL------------------CGVRGDASHAAKALFWQ 431
           G+ RIKL RGWITKAREIYS SMQL                  CGVRG+A+  AKALFWQ
Sbjct: 402 GKARIKLSRGWITKAREIYSTSMQLYLKFSFSSSLNGLVTFQLCGVRGNANVPAKALFWQ 461

Query: 430 ARKGLSFVLTFASEKERNVAIMIARQYALDCNV 332
            RKGL+F+LTF SE+ERN AI++AR YA DCNV
Sbjct: 462 LRKGLTFLLTFESEQERNAAIVLARTYAYDCNV 494

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 471,504,160
Number of Sequences: 1393205
Number of extensions: 9613825
Number of successful extensions: 20726
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20701
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19808345223
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MPDL080a02_f AV780626 1 557 2 MPD079d04_f AV775179 68 146

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