Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005362A_C01 KMC005362A_c01
(519 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD30015.1| beta 1,3-glycosyltransferase-like protein I [Lyc... 86 3e-16
ref|NP_568791.1| Avr9 elicitor response protein-like; protein id... 83 2e-15
dbj|BAB09796.1| Avr9 elicitor response protein-like [Arabidopsis... 74 8e-13
emb|CAD44836.1| beta 1,3-glycosyltransferase-like protein I [Ory... 69 2e-11
ref|NP_174569.1| Avr9 elicitor response protein, putative; prote... 59 4e-08
>emb|CAD30015.1| beta 1,3-glycosyltransferase-like protein I [Lycopersicon
esculentum]
Length = 343
Score = 85.5 bits (210), Expect = 3e-16
Identities = 38/50 (76%), Positives = 44/50 (88%)
Frame = -3
Query: 517 QFISINRLILRTYAHDDISTGSWFIGLDVMHVDETKFCCSSRSPGAICAA 368
QFISINR +LR+YAHDD+S GSWFIGLDV +VDE KFCCSS S G++CAA
Sbjct: 293 QFISINRSMLRSYAHDDVSAGSWFIGLDVKYVDEGKFCCSSWSSGSVCAA 342
>ref|NP_568791.1| Avr9 elicitor response protein-like; protein id: At5g53340.1,
supported by cDNA: gi_14423409, supported by cDNA:
gi_20148408 [Arabidopsis thaliana]
gi|14423410|gb|AAK62387.1|AF386942_1 Avr9 elicitor
response protein-like [Arabidopsis thaliana]
gi|20148409|gb|AAM10095.1| Avr9 elicitor response
protein-like [Arabidopsis thaliana]
Length = 338
Score = 83.2 bits (204), Expect = 2e-15
Identities = 37/51 (72%), Positives = 43/51 (83%)
Frame = -3
Query: 517 QFISINRLILRTYAHDDISTGSWFIGLDVMHVDETKFCCSSRSPGAICAAV 365
+F+SINR IL +YAHDD+STGSWF+GLDV HVDE KFCCS+ S AICA V
Sbjct: 288 RFVSINRDILHSYAHDDVSTGSWFVGLDVKHVDEGKFCCSAWSSEAICAGV 338
>dbj|BAB09796.1| Avr9 elicitor response protein-like [Arabidopsis thaliana]
Length = 362
Score = 74.3 bits (181), Expect = 8e-13
Identities = 31/41 (75%), Positives = 37/41 (89%)
Frame = -3
Query: 517 QFISINRLILRTYAHDDISTGSWFIGLDVMHVDETKFCCSS 395
+F+SINR IL +YAHDD+STGSWF+GLDV HVDE KFCCS+
Sbjct: 288 RFVSINRDILHSYAHDDVSTGSWFVGLDVKHVDEGKFCCSA 328
>emb|CAD44836.1| beta 1,3-glycosyltransferase-like protein I [Oryza sativa]
Length = 323
Score = 69.3 bits (168), Expect = 2e-11
Identities = 31/45 (68%), Positives = 34/45 (74%)
Frame = -3
Query: 517 QFISINRLILRTYAHDDISTGSWFIGLDVMHVDETKFCCSSRSPG 383
QFISINR +LRTYAHDD+S G W IGL V HV+E K CCSS G
Sbjct: 274 QFISINRSVLRTYAHDDVSVGPWLIGLAVKHVNEAKLCCSSWPSG 318
>ref|NP_174569.1| Avr9 elicitor response protein, putative; protein id: At1g32930.1
[Arabidopsis thaliana] gi|25370618|pir||H86453 avr9
homolog F9L11.10 [imported] - Arabidopsis thaliana
gi|6910570|gb|AAF31275.1|AC006424_4 Highly similar to
avr9 [Arabidopsis thaliana]
Length = 399
Score = 58.5 bits (140), Expect = 4e-08
Identities = 22/40 (55%), Positives = 31/40 (77%)
Frame = -3
Query: 514 FISINRLILRTYAHDDISTGSWFIGLDVMHVDETKFCCSS 395
+IS+NR +L YA++D+S GSWFIGLDV H+D+ CC +
Sbjct: 309 YISVNRQLLHKYANEDVSLGSWFIGLDVEHIDDRSLCCGT 348
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 417,610,703
Number of Sequences: 1393205
Number of extensions: 8560326
Number of successful extensions: 17831
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17828
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16442828304
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
