Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005351A_C01 KMC005351A_c01
(644 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA05979.1| adenine nucleotide translocator [Lupinus albus] 164 7e-43
sp|O22342|ADT1_GOSHI ADP,ATP carrier protein 1, mitochondrial pr... 136 2e-34
ref|NP_187470.1| adenylate translocator; protein id: At3g08580.2... 126 2e-31
prf||1908224A nucleotide translocator 125 2e-30
pir||S29852 ADP,ATP carrier protein - Arabidopsis thaliana gi|16... 125 2e-30
>emb|CAA05979.1| adenine nucleotide translocator [Lupinus albus]
Length = 388
Score = 164 bits (414), Expect(2) = 7e-43
Identities = 88/135 (65%), Positives = 100/135 (73%)
Frame = +1
Query: 175 MVDQVQHPTIVEKATGKLHSQFGLSSGIKSYDGAYRHPALYQRRSFGNYSNAGLQYPADA 354
MVDQVQ PTI+EK + +LH + G+SS I+SYD A+R PA+YQRRSFGNYSNA LQYP
Sbjct: 1 MVDQVQRPTIMEKVSSQLHLRSGVSSDIQSYDAAFRRPAVYQRRSFGNYSNAALQYPVMP 60
Query: 355 LLQSLC*FICSCCNCLPCLCRQLQLSKSHFFIDFLMGGVSAAVSKTAAAPIERVKLLIQN 534
++ + S P K HF IDFLMGGVSAAVSKTAAAPIERVKLLIQN
Sbjct: 61 SCRATT-DLSSVATASPVFAAA-PAEKGHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQN 118
Query: 535 QDEMIKTGRLSEPYK 579
QDEMIK+GRLSEPYK
Sbjct: 119 QDEMIKSGRLSEPYK 133
Score = 32.3 bits (72), Expect(2) = 7e-43
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 585 LGDGFARTTKDEGIVDLWRG 644
+GD F RT DEG+V LWRG
Sbjct: 135 IGDCFKRTMADEGVVALWRG 154
>sp|O22342|ADT1_GOSHI ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP
translocase 1) (Adenine nucleotide translocator 1) (ANT
1) gi|7441722|pir||T09709 ADP,ATP carrier protein CANT1
- upland cotton gi|2463664|gb|AAB72047.1| adenine
nucleotide translocator 1 [Gossypium hirsutum]
Length = 386
Score = 136 bits (343), Expect(2) = 2e-34
Identities = 78/137 (56%), Positives = 95/137 (68%), Gaps = 3/137 (2%)
Frame = +1
Query: 178 VDQVQHPTIVEKATGKLHSQFGLSSGIKSYDGAYRHPALYQRRS-FGNYSNAGLQYPADA 354
+DQVQHP++++K G+L S + Y+G++R PALYQRR+ +GNYSNA LQ+P A
Sbjct: 1 MDQVQHPSVMQKVAGQLFRS-SHSQDFQGYNGSFRSPALYQRRAAYGNYSNAALQHPVRA 59
Query: 355 LLQSLC*FICSCCNCLPCLCRQLQLSK--SHFFIDFLMGGVSAAVSKTAAAPIERVKLLI 528
+ + +C Q K S F IDFLMGGVSAAVSKTAAAPIERVKLLI
Sbjct: 60 FGD-----LSMVPSTASAICVQAPAEKGFSSFAIDFLMGGVSAAVSKTAAAPIERVKLLI 114
Query: 529 QNQDEMIKTGRLSEPYK 579
QNQDEMIK+GRLSEPYK
Sbjct: 115 QNQDEMIKSGRLSEPYK 131
Score = 31.6 bits (70), Expect(2) = 2e-34
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 585 LGDGFARTTKDEGIVDLWRG 644
+GD F RT KDEG LWRG
Sbjct: 133 IGDCFKRTIKDEGFGSLWRG 152
>ref|NP_187470.1| adenylate translocator; protein id: At3g08580.2, supported by cDNA:
36818., supported by cDNA: gi_14334483, supported by
cDNA: gi_14596052, supported by cDNA: gi_15809959,
supported by cDNA: gi_18491188 [Arabidopsis thaliana]
gi|19883932|sp|P31167|ADT1_ARATH ADP,ATP carrier protein
1, mitochondrial precursor (ADP/ATP translocase 1)
(Adenine nucleotide translocator 1) (ANT 1)
gi|12322734|gb|AAG51358.1|AC012562_19 adenylate
translocator; 17953-16629 [Arabidopsis thaliana]
gi|14334484|gb|AAK59440.1| putative adenylate
translocator protein [Arabidopsis thaliana]
gi|14596053|gb|AAK68754.1| adenylate translocator
[Arabidopsis thaliana] gi|15809960|gb|AAL06907.1|
AT3g08580/F17O14_5 [Arabidopsis thaliana]
gi|18491189|gb|AAL69497.1| putative adenylate
translocator protein [Arabidopsis thaliana]
gi|23198346|gb|AAN15700.1| adenylate translocator
[Arabidopsis thaliana] gi|27311563|gb|AAO00747.1|
adenylate translocator [Arabidopsis thaliana]
Length = 381
Score = 126 bits (316), Expect(2) = 2e-31
Identities = 75/137 (54%), Positives = 90/137 (64%), Gaps = 2/137 (1%)
Frame = +1
Query: 175 MVDQVQHPTIVEKATGKLHSQFGLSSGIKSYDGAYRHPALYQRRS-FGNYSNAGLQYPAD 351
MVDQVQHPTI +KA G QF SS K Y+ P++YQR + +GNYSNA Q+P
Sbjct: 1 MVDQVQHPTIAQKAAG----QFMRSSVSKDVQVGYQRPSMYQRHATYGNYSNAAFQFPPT 56
Query: 352 ALLQSLC*FICSCCNCLPCLCRQL-QLSKSHFFIDFLMGGVSAAVSKTAAAPIERVKLLI 528
+ + + P + + ++F +DFLMGGVSAAVSKTAAAPIERVKLLI
Sbjct: 57 SRMLAT--------TASPVFVQTPGEKGFTNFALDFLMGGVSAAVSKTAAAPIERVKLLI 108
Query: 529 QNQDEMIKTGRLSEPYK 579
QNQDEMIK GRLSEPYK
Sbjct: 109 QNQDEMIKAGRLSEPYK 125
Score = 32.0 bits (71), Expect(2) = 2e-31
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 585 LGDGFARTTKDEGIVDLWRG 644
+GD F RT KDEG LWRG
Sbjct: 127 IGDCFGRTIKDEGFGSLWRG 146
>prf||1908224A nucleotide translocator
Length = 403
Score = 125 bits (314), Expect(2) = 2e-30
Identities = 73/137 (53%), Positives = 91/137 (66%), Gaps = 2/137 (1%)
Frame = +1
Query: 175 MVDQVQHPTIVEKATGKLHSQFGLSSGIKSYDGAYRHPALYQRRS-FGNYSNAGLQYPAD 351
MV+Q QHPTI++K +G+L S +S I+ Y A + PA YQ+ + +GNYSNA QYP
Sbjct: 19 MVEQTQHPTILQKVSGQLLSS-SVSQDIRGYASASKRPATYQKHAAYGNYSNAAFQYPLV 77
Query: 352 ALLQSLC*FICSCCNCLPCLCRQL-QLSKSHFFIDFLMGGVSAAVSKTAAAPIERVKLLI 528
A Q P + + ++F IDF+MGGVSAAVSKTAAAPIERVKLLI
Sbjct: 78 AASQI-------ATTTSPVFVQAPGEKGFTNFAIDFMMGGVSAAVSKTAAAPIERVKLLI 130
Query: 529 QNQDEMIKTGRLSEPYK 579
QNQDEM+K GRL+EPYK
Sbjct: 131 QNQDEMLKAGRLTEPYK 147
Score = 29.3 bits (64), Expect(2) = 2e-30
Identities = 12/18 (66%), Positives = 13/18 (71%)
Frame = +3
Query: 591 DGFARTTKDEGIVDLWRG 644
D F RT +DEGI LWRG
Sbjct: 151 DCFGRTIRDEGIGSLWRG 168
>pir||S29852 ADP,ATP carrier protein - Arabidopsis thaliana
gi|16160|emb|CAA48579.1| adenosine nucleotide
translocator [Arabidopsis thaliana]
Length = 385
Score = 125 bits (314), Expect(2) = 2e-30
Identities = 73/137 (53%), Positives = 91/137 (66%), Gaps = 2/137 (1%)
Frame = +1
Query: 175 MVDQVQHPTIVEKATGKLHSQFGLSSGIKSYDGAYRHPALYQRRS-FGNYSNAGLQYPAD 351
MV+Q QHPTI++K +G+L S +S I+ Y A + PA YQ+ + +GNYSNA QYP
Sbjct: 1 MVEQTQHPTILQKVSGQLLSS-SVSQDIRGYASASKRPATYQKHAAYGNYSNAAFQYPLV 59
Query: 352 ALLQSLC*FICSCCNCLPCLCRQL-QLSKSHFFIDFLMGGVSAAVSKTAAAPIERVKLLI 528
A Q P + + ++F IDF+MGGVSAAVSKTAAAPIERVKLLI
Sbjct: 60 AASQI-------ATTTSPVFVQAPGEKGFTNFAIDFMMGGVSAAVSKTAAAPIERVKLLI 112
Query: 529 QNQDEMIKTGRLSEPYK 579
QNQDEM+K GRL+EPYK
Sbjct: 113 QNQDEMLKAGRLTEPYK 129
Score = 29.3 bits (64), Expect(2) = 2e-30
Identities = 12/18 (66%), Positives = 13/18 (71%)
Frame = +3
Query: 591 DGFARTTKDEGIVDLWRG 644
D F RT +DEGI LWRG
Sbjct: 133 DCFGRTIRDEGIGSLWRG 150
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 603,767,733
Number of Sequences: 1393205
Number of extensions: 14080093
Number of successful extensions: 50595
Number of sequences better than 10.0: 218
Number of HSP's better than 10.0 without gapping: 46763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50356
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27291941472
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
