>KMC005340A_C01 KMC005340A_c01
cttttctcttttttgggtggagctagactggctttcctctcattcaatttttttcgtagt
agttaattgagcagataaccAGATATAAGAATGTAAAAAAAACAGTCGAATGATAGTGTA
AAAGCTATGTGTATGATAAGCTTAAATTGAGTTTGCCTTCAGCAGCTACTAAGCTCTTTC
AACACAGAAAGTTCACTTTCCAATATAGGCGCATGGAAAGCCTGCGACATTAGATACTTA
TGATATCTGTATACCGTCCTCTACTTCAAAATGCGATGGCAGATCCATTCATCATTTATG
ATCGTTCAAACTGGATGTCCCCATGAAAGGCAAATGAGCTAAAGATTCAATTCTGACGCG
CTATGGACAAGTCTAGATGTCTCCATCTTTTGGCTGATCAGATCCTTCAACTCTATCTCT
CCAGGAAACCTTGCCTCCTTCAATTTAGAGAACACCAGTTCACCATTCAA

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC005340A_C01 KMC005340A_c01
         (470 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_200672.1| putative protein; protein id: At5g58640.1, supp...    48  4e-05
dbj|BAB89601.1| P0446G04.25 [Oryza sativa (japonica cultivar-gro...    42  0.004
gb|AAL31872.1|AF383163_1 immunoglobulin-like transcript 7 [Pan t...    32  4.4
gb|EAA15358.1| hypothetical protein [Plasmodium yoelii yoelii]         31  7.4
ref|NP_662474.1| 3,4-dihydroxy-2-butanone 4-phosphate synthase/G...    30  9.7

>ref|NP_200672.1| putative protein; protein id: At5g58640.1, supported by cDNA:
           36809., supported by cDNA: gi_17933296, supported by
           cDNA: gi_20453392 [Arabidopsis thaliana]
           gi|17933297|gb|AAL48231.1|AF446358_1 AT5g58640/mzn1_90
           [Arabidopsis thaliana] gi|20453393|gb|AAM19935.1|
           AT5g58640/mzn1_90 [Arabidopsis thaliana]
           gi|21593175|gb|AAM65124.1| unknown [Arabidopsis
           thaliana]
          Length = 228

 Score = 48.1 bits (113), Expect = 4e-05
 Identities = 23/38 (60%), Positives = 29/38 (75%)
 Frame = -1

Query: 467 NGELVFSKLKEARFPGEIELKDLISQKMETSRLVHSAS 354
           NGE VFSKLKE RFPGEIEL+DLIS+ +    ++  +S
Sbjct: 190 NGEPVFSKLKEGRFPGEIELRDLISKTLTRPSILTGSS 227

>dbj|BAB89601.1| P0446G04.25 [Oryza sativa (japonica cultivar-group)]
           gi|20805244|dbj|BAB92910.1| P0460C04.2 [Oryza sativa
           (japonica cultivar-group)]
          Length = 232

 Score = 41.6 bits (96), Expect = 0.004
 Identities = 18/32 (56%), Positives = 24/32 (74%)
 Frame = -1

Query: 467 NGELVFSKLKEARFPGEIELKDLISQKMETSR 372
           NG+LVFSKL E RFP E EL++LI  ++  S+
Sbjct: 191 NGQLVFSKLSEQRFPSEFELRELIGNRLPDSQ 222

>gb|AAL31872.1|AF383163_1 immunoglobulin-like transcript 7 [Pan troglodytes]
          Length = 499

 Score = 31.6 bits (70), Expect = 4.4
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -1

Query: 413 ELKDLISQKMETSRLVHSASELNL*LICLSWGHPV*TIINDEWICHRILK*RTVYRYHKY 234
           ++ D  S  ++    V S  ++ L  +C SWG     ++  E   H  L+ R+ YR HKY
Sbjct: 319 QISDRPSLSVQPGPTVTSGEKVTL--LCQSWGPMFTFLLTKEGAAHPPLRLRSTYRAHKY 376

>gb|EAA15358.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 622

 Score = 30.8 bits (68), Expect = 7.4
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
 Frame = +1

Query: 157 LQQLLSSFNTESSLSNIGAWKACDIRYL*YLYTVL--------YFKMRWQIHSSFMIVQT 312
           L++ + +F   + L N+GA K  ++RY+  LYT+L        Y+K     H    +   
Sbjct: 97  LEKYIGNFKYWNFLLNVGALKDANLRYMSELYTLLSHICNTIEYYKKNDDKHKKLYLYSA 156

Query: 313 GC 318
            C
Sbjct: 157 NC 158

>ref|NP_662474.1| 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II
           [Chlorobium tepidum TLS] gi|21647591|gb|AAM72816.1|
           3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP
           cyclohydrolase II [Chlorobium tepidum TLS]
          Length = 427

 Score = 30.4 bits (67), Expect = 9.7
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 446 KLKEARFPGEIELKDLISQKMETSRLVHSASELNL 342
           KLKE      I +KDL++ +M+ S+LVH A E  L
Sbjct: 185 KLKEKLGMKLITIKDLVAYRMQRSKLVHRAVESKL 219

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 366,766,768
Number of Sequences: 1393205
Number of extensions: 6557817
Number of successful extensions: 14381
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14379
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12524054526
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MPD062c05_f AV774128 1 470 2 MWM184b07_f AV767557 115 387

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