Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005334A_C01 KMC005334A_c01
(547 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O82702|VAG1_TOBAC Vacuolar ATP synthase subunit G 1 (V-ATPase... 109 2e-23
ref|NP_186788.1| vacuolar membrane ATPase subunit G (AVMA10); pr... 108 3e-23
sp|O82703|VAG2_TOBAC Vacuolar ATP synthase subunit G 2 (V-ATPase... 103 2e-21
sp|Q9SP55|VATG_CITLI Vacuolar ATP synthase subunit G (V-ATPase G... 101 7e-21
ref|NP_194102.1| V-ATPase subunit G (vag2 gene); protein id: At4... 97 1e-19
>sp|O82702|VAG1_TOBAC Vacuolar ATP synthase subunit G 1 (V-ATPase G subunit 1) (Vacuolar
proton pump G subunit 1) gi|3717987|emb|CAA06756.1| G
subunit of Vacuolar-type H+-ATPase [Nicotiana tabacum]
Length = 110
Score = 109 bits (273), Expect = 2e-23
Identities = 56/80 (70%), Positives = 67/80 (83%)
Frame = -2
Query: 543 KLARLKQAQEEAEKDNAEYRAQLEHELPKKVSATRGDSGANVKRLEQETDAKIQHLHTEA 364
K ARLKQA+EEAEK+ AE+RA +E E +K+ T GDSGANVKRLEQETDAKI+HL TEA
Sbjct: 31 KQARLKQAKEEAEKEIAEFRAYMEAEFQRKLEQTSGDSGANVKRLEQETDAKIEHLKTEA 90
Query: 363 GRISQDVVAMLLKYVTTVKH 304
R+S DVV MLL++VTTVK+
Sbjct: 91 ERVSPDVVQMLLRHVTTVKN 110
>ref|NP_186788.1| vacuolar membrane ATPase subunit G (AVMA10); protein id:
At3g01390.1, supported by cDNA: gi_18252860, supported
by cDNA: gi_5853314 [Arabidopsis thaliana]
gi|12585427|sp|O82628|VAG1_ARATH Vacuolar ATP synthase
subunit G 1 (V-ATPase G subunit 1) (Vacuolar proton pump
G subunit 1) gi|11279178|pir||T51825 H+-exporting ATPase
(EC 3.6.3.6) chain G, vacuolar [imported] - Arabidopsis
thaliana gi|3717946|emb|CAA06758.1| vag1 [Arabidopsis
thaliana] gi|5853315|gb|AAD54418.1| vacuolar membrane
ATPase subunit G [Arabidopsis thaliana]
gi|6692259|gb|AAF24609.1|AC010870_2 vacuolar membrane
ATPase subunit G (AVMA10) [Arabidopsis thaliana]
gi|18252861|gb|AAL62357.1| vacuolar membrane ATPase
subunit G (AVMA10) [Arabidopsis thaliana]
gi|21389701|gb|AAM48049.1| vacuolar membrane ATPase
subunit G AVMA10 [Arabidopsis thaliana]
Length = 110
Score = 108 bits (271), Expect = 3e-23
Identities = 55/80 (68%), Positives = 66/80 (81%)
Frame = -2
Query: 543 KLARLKQAQEEAEKDNAEYRAQLEHELPKKVSATRGDSGANVKRLEQETDAKIQHLHTEA 364
K+ARLKQA+EEAEK+ AEY+AQ E + +K+ T GDSGANVKRLEQETD KI+ L EA
Sbjct: 31 KMARLKQAKEEAEKEIAEYKAQTEQDFQRKLEETSGDSGANVKRLEQETDTKIEQLKNEA 90
Query: 363 GRISQDVVAMLLKYVTTVKH 304
RIS+DVV MLLK+VTTVK+
Sbjct: 91 SRISKDVVEMLLKHVTTVKN 110
>sp|O82703|VAG2_TOBAC Vacuolar ATP synthase subunit G 2 (V-ATPase G subunit 2) (Vacuolar
proton pump G subunit 2) gi|3717989|emb|CAA06757.1| vag2
[Nicotiana tabacum]
Length = 111
Score = 103 bits (256), Expect = 2e-21
Identities = 55/80 (68%), Positives = 63/80 (78%)
Frame = -2
Query: 543 KLARLKQAQEEAEKDNAEYRAQLEHELPKKVSATRGDSGANVKRLEQETDAKIQHLHTEA 364
K AR+KQA+EEAEK+ AE+RA +E E + V T GDSGANVKRLEQET AKIQHL TEA
Sbjct: 32 KQARMKQAKEEAEKEIAEFRAYMEAEFQRNVEQTSGDSGANVKRLEQETFAKIQHLKTEA 91
Query: 363 GRISQDVVAMLLKYVTTVKH 304
IS DVV MLL+ VTTVK+
Sbjct: 92 ESISHDVVQMLLRQVTTVKN 111
>sp|Q9SP55|VATG_CITLI Vacuolar ATP synthase subunit G (V-ATPase G subunit) (Vacuolar
proton pump G subunit) gi|5917785|gb|AAD56039.1|
vacuolar membrane ATPase subunit G [Citrus limon]
Length = 110
Score = 101 bits (251), Expect = 7e-21
Identities = 51/80 (63%), Positives = 64/80 (79%)
Frame = -2
Query: 543 KLARLKQAQEEAEKDNAEYRAQLEHELPKKVSATRGDSGANVKRLEQETDAKIQHLHTEA 364
K+ARLKQA+EEAE++ AEYRAQ+E E +K++ + GDSGANVKRLEQET+ KI HL A
Sbjct: 31 KMARLKQAKEEAEREIAEYRAQVEREFQRKLAESVGDSGANVKRLEQETEVKIHHLKAGA 90
Query: 363 GRISQDVVAMLLKYVTTVKH 304
+I DVV M LK+VTTVK+
Sbjct: 91 EKIQYDVVQMFLKHVTTVKN 110
>ref|NP_194102.1| V-ATPase subunit G (vag2 gene); protein id: At4g23710.1
[Arabidopsis thaliana] gi|12643367|sp|O82629|VAG2_ARATH
Vacuolar ATP synthase subunit G 2 (V-ATPase G subunit 2)
(Vacuolar proton pump G subunit 2)
gi|7447259|pir||T05603 H+-exporting ATPase (EC 3.6.3.6)
chain G, vacuolar - Arabidopsis thaliana
gi|4454040|emb|CAA23037.1| V-ATPase subunit G (vag2
gene) [Arabidopsis thaliana] gi|7269220|emb|CAB81289.1|
V-ATPase subunit G (vag2 gene) [Arabidopsis thaliana]
gi|27808518|gb|AAO24539.1| At4g23710 [Arabidopsis
thaliana]
Length = 106
Score = 97.1 bits (240), Expect = 1e-19
Identities = 51/80 (63%), Positives = 61/80 (75%)
Frame = -2
Query: 543 KLARLKQAQEEAEKDNAEYRAQLEHELPKKVSATRGDSGANVKRLEQETDAKIQHLHTEA 364
K+ RLKQA+EEAE + AE++ E +K+ AT GDSGANVKRLEQETDAKI+ L EA
Sbjct: 27 KMTRLKQAKEEAETEVAEHKTSTEQGFQRKLEATSGDSGANVKRLEQETDAKIEQLKNEA 86
Query: 363 GRISQDVVAMLLKYVTTVKH 304
RIS+DVV MLLK VTTV +
Sbjct: 87 TRISKDVVDMLLKNVTTVNN 106
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 435,989,738
Number of Sequences: 1393205
Number of extensions: 8698693
Number of successful extensions: 21632
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 21025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21600
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18660035355
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
