Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005319A_C01 KMC005319A_c01
(939 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T06396 isoprenylated protein - soybean (fragment) gi|532705... 219 5e-56
gb|AAL38281.1| unknown protein [Arabidopsis thaliana] gi|2014872... 129 6e-55
pir||T06394 isoprenylated protein - soybean (fragment) gi|532703... 193 3e-48
gb|AAN03471.1| unknown protein [Glycine max] 132 3e-43
emb|CAA07370.1| proline-rich protein [Capsicum annuum] 124 3e-27
>pir||T06396 isoprenylated protein - soybean (fragment) gi|532705|gb|AAA65013.1|
unknown
Length = 154
Score = 219 bits (558), Expect = 5e-56
Identities = 118/159 (74%), Positives = 120/159 (75%), Gaps = 9/159 (5%)
Frame = -1
Query: 675 KPKAAEHEKKKDGEKPKAAAEPEKKKDS--EKPKAAEPEKKKDGDKEKPKSDGPKK---- 514
KPKA E EKKKDG K AEPEKKKD EKPKA EPEKKKDG EKPK D PKK
Sbjct: 1 KPKA-EPEKKKDGGGEKPKAEPEKKKDGGGEKPKA-EPEKKKDGG-EKPKGDAPKKEAEK 57
Query: 513 ---GDEKPKDKPAPGPIPVHPVGPPPMAVPVGMMYAPTPCYEGRPAGPGFYEYGGPMPCY 343
G EKPKDKPAP P+PV P PMAVPVGM+YAP PCYEGRP GPG YEYGGPM CY
Sbjct: 58 PKPGPEKPKDKPAPAPLPVQPHMAAPMAVPVGMLYAPPPCYEGRPVGPG-YEYGGPMFCY 116
Query: 342 DGYYARPVYDSYGGSRPYYVNNRCDQYFSEENPTGCSIM 226
DGYYARPVYDSYGG RP YV NR DQYFSEENP GC IM
Sbjct: 117 DGYYARPVYDSYGGGRPCYV-NRGDQYFSEENPQGCIIM 154
>gb|AAL38281.1| unknown protein [Arabidopsis thaliana] gi|20148729|gb|AAM10255.1|
unknown protein [Arabidopsis thaliana]
Length = 254
Score = 129 bits (325), Expect(2) = 6e-55
Identities = 59/78 (75%), Positives = 67/78 (85%)
Frame = -3
Query: 937 TLMKLKVDLECEKCYKKVKKILCKFPQIRDQKYDEKDKIVFITVVCCSPEKIRDKLCGEG 758
T+MKLKVDL+C KCYKKVKK+LCKFPQIRDQ +DEK IV I VVCCSPE+I DKLC +G
Sbjct: 10 TMMKLKVDLDCAKCYKKVKKVLCKFPQIRDQLFDEKSNIVIIKVVCCSPERIMDKLCSKG 69
Query: 757 GGTIKSIEIVELPKPRPP 704
GG+IK+IEIVE PKP P
Sbjct: 70 GGSIKTIEIVEPPKPPQP 87
Score = 107 bits (268), Expect(2) = 6e-55
Identities = 76/179 (42%), Positives = 93/179 (51%), Gaps = 16/179 (8%)
Frame = -1
Query: 714 PDRLEPEKKKEADKPKAAEHEKKKDGEKPKAAAEPEKKKDSEKPKAAEPEKKKDGDKEKP 535
P +P +K + +PKA E K K+ EKPK +PEK K+ EKPK +PEK K+ +K K
Sbjct: 87 PQPQQPPQKPKDAQPKAPE--KPKEPEKPK---QPEKPKEPEKPK--QPEKPKEPEKTKQ 139
Query: 534 KSDGP-----KKGDEKPKDKPAPGPIPVHPVGPPPMAVPVGMMYAPTPC----YEGRPAG 382
+ P P PAP P P P GPPP A+P+ P C Y+G G
Sbjct: 140 PAPAPAPAPAPAAKPAPAPAPAPAPAPKQP-GPPPQAIPMMPQGQPAMCCGPYYDGY-GG 197
Query: 381 PGFYEYGGPMPCYDGYYARPVYDSYGGS----RPYYVN---NRCDQYFSEENPTGCSIM 226
P F YG P Y+ Y RPVY+S+GG P Y RCD YFSEENP CSIM
Sbjct: 198 PAFNGYGMPPQPYE-CYGRPVYESWGGGCPPPPPAYRQCHVTRCD-YFSEENPQSCSIM 254
>pir||T06394 isoprenylated protein - soybean (fragment) gi|532703|gb|AAA65012.1|
unknown
Length = 130
Score = 193 bits (491), Expect = 3e-48
Identities = 99/139 (71%), Positives = 104/139 (74%), Gaps = 2/139 (1%)
Frame = -1
Query: 636 EKPKAAAEPEKKKDS--EKPKAAEPEKKKDGDKEKPKSDGPKKGDEKPKDKPAPGPIPVH 463
EKPK EPEKKKD EKPK EPEKKKDG ++ PK G EKPKDKP P P+PV
Sbjct: 3 EKPKT--EPEKKKDGGGEKPKE-EPEKKKDGGEK------PKPGPEKPKDKPTPAPLPVQ 53
Query: 462 PVGPPPMAVPVGMMYAPTPCYEGRPAGPGFYEYGGPMPCYDGYYARPVYDSYGGSRPYYV 283
P PMAVPVGM+YAP PCY GRP GPG YEYGGPM CYDGYYARPVYDSY G RP Y
Sbjct: 54 PHIAAPMAVPVGMLYAPPPCYGGRPVGPG-YEYGGPMLCYDGYYARPVYDSYSGGRPCY- 111
Query: 282 NNRCDQYFSEENPTGCSIM 226
NRCDQYFSEENP GC+IM
Sbjct: 112 GNRCDQYFSEENPQGCTIM 130
>gb|AAN03471.1| unknown protein [Glycine max]
Length = 240
Score = 132 bits (333), Expect(2) = 3e-43
Identities = 60/78 (76%), Positives = 70/78 (88%)
Frame = -3
Query: 937 TLMKLKVDLECEKCYKKVKKILCKFPQIRDQKYDEKDKIVFITVVCCSPEKIRDKLCGEG 758
T+M+LKVDL+C KCYKKVKKILCKFPQIRDQ YDEK+ IV I VVCC+PE++RDK+C +G
Sbjct: 6 TIMRLKVDLQCHKCYKKVKKILCKFPQIRDQVYDEKNNIVTIAVVCCNPEELRDKICCKG 65
Query: 757 GGTIKSIEIVELPKPRPP 704
GTIKSIEIVE PKP+PP
Sbjct: 66 CGTIKSIEIVEPPKPKPP 83
Score = 65.5 bits (158), Expect(2) = 3e-43
Identities = 41/74 (55%), Positives = 46/74 (61%)
Frame = -1
Query: 702 EPEKKKEADKPKAAEHEKKKDGEKPKAAAEPEKKKDSEKPKAAEPEKKKDGDKEKPKSDG 523
EPEK KE +KPK E EK K+ EKPK EP K K+ EKPK EPEK K + EKPK
Sbjct: 91 EPEKSKEPEKPK--EPEKPKEPEKPK---EPPKPKEPEKPK--EPEKPK--EPEKPKEPE 141
Query: 522 PKKGDEKPKDKPAP 481
K EKPKD +P
Sbjct: 142 KPKEPEKPKDPRSP 155
Score = 54.7 bits (130), Expect = 2e-06
Identities = 35/68 (51%), Positives = 40/68 (58%)
Frame = -1
Query: 702 EPEKKKEADKPKAAEHEKKKDGEKPKAAAEPEKKKDSEKPKAAEPEKKKDGDKEKPKSDG 523
EPEK KE +KPK E K K+ EKPK EPEK K+ EKPK EPEK K + EKPK
Sbjct: 103 EPEKPKEPEKPK--EPPKPKEPEKPK---EPEKPKEPEKPK--EPEKPK--EPEKPKDPR 153
Query: 522 PKKGDEKP 499
+ P
Sbjct: 154 SPRSPRSP 161
Score = 48.5 bits (114), Expect = 1e-04
Identities = 38/92 (41%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = -1
Query: 720 RSPDRLEPEKKKEADKPKAAEHEKKKDGEKPKAAAEPEKKKDSEKPKAAEPEKKKDGDKE 541
+S + +EP K K +P EKPK EPEK K+ EKPK EPEK K + E
Sbjct: 70 KSIEIVEPPKPKPPPQP-----------EKPK---EPEKSKEPEKPK--EPEKPK--EPE 111
Query: 540 KPKSDGPKKGDEKPK--DKPAPGPIPVHPVGP 451
KPK K EKPK +KP P P P
Sbjct: 112 KPKEPPKPKEPEKPKEPEKPKEPEKPKEPEKP 143
Score = 35.0 bits (79), Expect = 1.6
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Frame = -2
Query: 593 PRSPRRRSLRKRKMGTRKSPSQMGQRREMRSPRTNPHP----------VRYRSTQWGHRQ 444
P+ P + ++ K P + + ++ RSPR+ P VR+R H Q
Sbjct: 125 PKEPEKPKEPEKPKEPEK-PKEPEKPKDPRSPRSPRSPSLNALLRCRFVRHRCQCVRHSQ 183
Query: 443 -----WQCQLG*CMLQLLVTRAGLPGRASM-SMVGRCHVMTGIMRGPFMIVMVEA 297
W +LG + + + G G A M + VG HVMT IM G FMIV V A
Sbjct: 184 HLRHRWWFRLGCAVFHAM--KVGPVGHALMGTAVGPHHVMTLIMEGLFMIVTVGA 236
>emb|CAA07370.1| proline-rich protein [Capsicum annuum]
Length = 238
Score = 124 bits (310), Expect = 3e-27
Identities = 57/76 (75%), Positives = 64/76 (84%)
Frame = -3
Query: 931 MKLKVDLECEKCYKKVKKILCKFPQIRDQKYDEKDKIVFITVVCCSPEKIRDKLCGEGGG 752
M LKVDL+C CYKKVKKILCKFPQIRDQ YDEK V ITV+CC+PEK+RDKLC +G G
Sbjct: 1 MVLKVDLQCCSCYKKVKKILCKFPQIRDQIYDEKGNKVTITVICCNPEKLRDKLCSKGCG 60
Query: 751 TIKSIEIVELPKPRPP 704
IKSIEI+E PKP+PP
Sbjct: 61 VIKSIEIIEPPKPKPP 76
Score = 112 bits (280), Expect = 8e-24
Identities = 84/190 (44%), Positives = 98/190 (51%), Gaps = 25/190 (13%)
Frame = -1
Query: 720 RSPDRLEPEKKKEADKPKAAEHEKKKDGEKPKAAAEPEKKKDSEKPKAAEPEKKKDGDK- 544
+S + +EP K K +KPK E EK K EKPK EPEK K EKPK EPEK K +K
Sbjct: 63 KSIEIIEPPKPKPPEKPK--EPEKPKQPEKPK---EPEKPKQPEKPK--EPEKPKQPEKP 115
Query: 543 ---EKPKSDGPKKGDEKPKD----KPAPGPIPVHPVGPPPMAVPVGMMYAPTP------- 406
EKPK+ K EKPK+ K AP P PV P P P +VPV + P P
Sbjct: 116 KEPEKPKAPEKPKEPEKPKEPEKPKEAPKPPPVAP-PPAPESVPVPVQEYPPPPSGYCCG 174
Query: 405 -CYEGRPAGPGFYEYGGPMPCYDGYYARPVYDSYG---GSRPYYVN-----NRCDQYF-S 256
CY G GP + YG P+P P Y +YG G PY N +RCD Y S
Sbjct: 175 QCYAGHTGGPCYQWYGRPVP------PPPCYGNYGYSYGPGPYCYNRGCYVSRCDPYLCS 228
Query: 255 EENPTGCSIM 226
+EN TGCSIM
Sbjct: 229 DENATGCSIM 238
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 910,243,152
Number of Sequences: 1393205
Number of extensions: 26324079
Number of successful extensions: 245358
Number of sequences better than 10.0: 5235
Number of HSP's better than 10.0 without gapping: 120909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201269
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 52414431048
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
