Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005316A_C01 KMC005316A_c01
(631 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM66110.1| putative inorganic pyrophosphatase [Arabidopsis t... 214 1e-54
ref|NP_179415.1| putative inorganic pyrophosphatase; protein id:... 214 1e-54
sp|Q43187|IPYR_SOLTU Soluble inorganic pyrophosphatase (Pyrophos... 210 1e-53
ref|NP_171613.1| soluble inorganic pyrophosphatase, putative; pr... 209 3e-53
gb|AAD46520.1|AF149116_1 soluble inorganic pyrophosphatase [Popu... 206 2e-52
>gb|AAM66110.1| putative inorganic pyrophosphatase [Arabidopsis thaliana]
Length = 218
Score = 214 bits (544), Expect = 1e-54
Identities = 105/120 (87%), Positives = 112/120 (92%)
Frame = -2
Query: 630 RTICEDSDPMDVLVLMQEPVLPASFLRARAIGLMPMIDQGEKDDKIIAVCADDPEFRHYT 451
RTICEDSDPMDVLVLMQEPVL SFLRARAIGLMPMIDQGEKDDKIIAVCADDPEFRHY
Sbjct: 99 RTICEDSDPMDVLVLMQEPVLTGSFLRARAIGLMPMIDQGEKDDKIIAVCADDPEFRHYR 158
Query: 450 DIKELPPHRLAEIRRFFEDYQKNENQKVDVEDFLPAEAAVEAIKYSMDLYAAYIVESLRQ 271
DIKELPPHRLAEIRRFFEDY+KNEN+KVDVE FLPA+AA++AIK SMDLYAAYI L++
Sbjct: 159 DIKELPPHRLAEIRRFFEDYKKNENKKVDVEAFLPAQAAIDAIKDSMDLYAAYIKAGLQR 218
>ref|NP_179415.1| putative inorganic pyrophosphatase; protein id: At2g18230.1,
supported by cDNA: 8068., supported by cDNA:
gi_15081633, supported by cDNA: gi_20147160 [Arabidopsis
thaliana] gi|26454634|sp|P21216|IPYR_ARATH Soluble
inorganic pyrophosphatase (Pyrophosphate
phospho-hydrolase) (PPase) gi|25290352|pir||H84561
probable inorganic pyrophosphatase [imported] -
Arabidopsis thaliana gi|4309743|gb|AAD15513.1| putative
inorganic pyrophosphatase [Arabidopsis thaliana]
gi|15081634|gb|AAK82472.1| At2g18230/T30D6.26
[Arabidopsis thaliana] gi|20147161|gb|AAM10297.1|
At2g18230/T30D6.26 [Arabidopsis thaliana]
Length = 218
Score = 214 bits (544), Expect = 1e-54
Identities = 105/120 (87%), Positives = 112/120 (92%)
Frame = -2
Query: 630 RTICEDSDPMDVLVLMQEPVLPASFLRARAIGLMPMIDQGEKDDKIIAVCADDPEFRHYT 451
RTICEDSDPMDVLVLMQEPVL SFLRARAIGLMPMIDQGEKDDKIIAVCADDPEFRHY
Sbjct: 99 RTICEDSDPMDVLVLMQEPVLTGSFLRARAIGLMPMIDQGEKDDKIIAVCADDPEFRHYR 158
Query: 450 DIKELPPHRLAEIRRFFEDYQKNENQKVDVEDFLPAEAAVEAIKYSMDLYAAYIVESLRQ 271
DIKELPPHRLAEIRRFFEDY+KNEN+KVDVE FLPA+AA++AIK SMDLYAAYI L++
Sbjct: 159 DIKELPPHRLAEIRRFFEDYKKNENKKVDVEAFLPAQAAIDAIKDSMDLYAAYIKAGLQR 218
>sp|Q43187|IPYR_SOLTU Soluble inorganic pyrophosphatase (Pyrophosphate phospho-hydrolase)
(PPase) gi|7436030|pir||T07594 probable inorganic
diphosphatase (EC 3.6.1.1), soluble PPA - potato
gi|534916|emb|CAA85362.1| soluble inorganic
pyrophosphatase [Solanum tuberosum]
Length = 211
Score = 210 bits (535), Expect = 1e-53
Identities = 100/120 (83%), Positives = 111/120 (92%)
Frame = -2
Query: 630 RTICEDSDPMDVLVLMQEPVLPASFLRARAIGLMPMIDQGEKDDKIIAVCADDPEFRHYT 451
RT+CED+DPMDVLVLMQEPVLP FLRARAIGLMPMIDQGEKDDKIIAVCADDPE+RHYT
Sbjct: 92 RTLCEDNDPMDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYT 151
Query: 450 DIKELPPHRLAEIRRFFEDYQKNENQKVDVEDFLPAEAAVEAIKYSMDLYAAYIVESLRQ 271
DIK+LPPHRLAEIRRFFEDY+KNEN+ V V+DFLP +AV AI+YSMDLYA YI+ SLR+
Sbjct: 152 DIKQLPPHRLAEIRRFFEDYKKNENKDVAVDDFLPPNSAVNAIQYSMDLYAEYILHSLRK 211
>ref|NP_171613.1| soluble inorganic pyrophosphatase, putative; protein id:
At1g01050.1, supported by cDNA: 124537., supported by
cDNA: gi_15450698, supported by cDNA: gi_16323128,
supported by cDNA: gi_17473934, supported by cDNA:
gi_20148452 [Arabidopsis thaliana]
gi|15450699|gb|AAK96621.1| At1g01050/T25K16_5
[Arabidopsis thaliana] gi|16323129|gb|AAL15299.1|
At1g01050/T25K16_5 [Arabidopsis thaliana]
gi|17473935|gb|AAL38377.1| putative inorganic
pyrophosphatase [Arabidopsis thaliana]
gi|20148453|gb|AAM10117.1| putative inorganic
pyrophosphatase [Arabidopsis thaliana]
gi|21537232|gb|AAM61573.1| soluble inorganic
pyrophosphatase, putative [Arabidopsis thaliana]
gi|24797046|gb|AAN64535.1| At1g01050/T25K16_5
[Arabidopsis thaliana]
Length = 212
Score = 209 bits (531), Expect = 3e-53
Identities = 97/120 (80%), Positives = 113/120 (93%)
Frame = -2
Query: 630 RTICEDSDPMDVLVLMQEPVLPASFLRARAIGLMPMIDQGEKDDKIIAVCADDPEFRHYT 451
RT+CED+DP+DVLV+MQEPVLP FLRARAIGLMPMIDQGEKDDKIIAVC DDPE++HYT
Sbjct: 93 RTLCEDNDPIDVLVIMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCVDDPEYKHYT 152
Query: 450 DIKELPPHRLAEIRRFFEDYQKNENQKVDVEDFLPAEAAVEAIKYSMDLYAAYIVESLRQ 271
DIKELPPHRL+EIRRFFEDY+KNEN++V V DFLP+E+AVEAI+YSMDLYA YI+ +LR+
Sbjct: 153 DIKELPPHRLSEIRRFFEDYKKNENKEVAVNDFLPSESAVEAIQYSMDLYAEYILHTLRR 212
>gb|AAD46520.1|AF149116_1 soluble inorganic pyrophosphatase [Populus tremula x Populus
tremuloides]
Length = 215
Score = 206 bits (524), Expect = 2e-52
Identities = 97/120 (80%), Positives = 111/120 (91%)
Frame = -2
Query: 630 RTICEDSDPMDVLVLMQEPVLPASFLRARAIGLMPMIDQGEKDDKIIAVCADDPEFRHYT 451
RT+CED+DP+DVLVLMQEPVLP FLRARAIGLMPMIDQGEKDDKIIAVCADDPE++HYT
Sbjct: 96 RTLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYT 155
Query: 450 DIKELPPHRLAEIRRFFEDYQKNENQKVDVEDFLPAEAAVEAIKYSMDLYAAYIVESLRQ 271
DIKEL PHRL+EIRRFFEDY+KNEN++V V DFLP+ AVEAI+YSMDLYA YI+ +LR+
Sbjct: 156 DIKELAPHRLSEIRRFFEDYKKNENKEVAVNDFLPSNTAVEAIQYSMDLYAEYILHTLRR 215
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 521,205,758
Number of Sequences: 1393205
Number of extensions: 10476091
Number of successful extensions: 28526
Number of sequences better than 10.0: 264
Number of HSP's better than 10.0 without gapping: 27114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28374
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25870486187
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
