Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005311A_C01 KMC005311A_c01
(588 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF00609.1|AF156780_1 nod factor binding lectin-nucleotide ph... 347 8e-95
gb|AAK15160.1|AF288132_1 putative apyrase [Medicago truncatula] 253 2e-66
gb|AAG32960.1|AF207688_1 apyrase GS52 [Glycine soja] 246 2e-64
gb|AAO23004.1| apyrase-like protein [Medicago truncatula] 244 4e-64
gb|AAO23002.1| apyrase-like protein [Medicago truncatula] 244 8e-64
>gb|AAF00609.1|AF156780_1 nod factor binding lectin-nucleotide phosphohydrolase [Lotus
japonicus]
Length = 456
Score = 347 bits (889), Expect = 8e-95
Identities = 169/169 (100%), Positives = 169/169 (100%)
Frame = -3
Query: 586 APASGSNLNQCRKIALKALKVNAPCPYQNCTFGGIWNGGGGSGQKNLFLTSSFYYLSEDV 407
APASGSNLNQCRKIALKALKVNAPCPYQNCTFGGIWNGGGGSGQKNLFLTSSFYYLSEDV
Sbjct: 288 APASGSNLNQCRKIALKALKVNAPCPYQNCTFGGIWNGGGGSGQKNLFLTSSFYYLSEDV 347
Query: 406 GIFVNKPNAKIRPVDLKTAAKLACKTNLEDAKSKYPDLYEKDSVEYVCLDLVYVYTLLVD 227
GIFVNKPNAKIRPVDLKTAAKLACKTNLEDAKSKYPDLYEKDSVEYVCLDLVYVYTLLVD
Sbjct: 348 GIFVNKPNAKIRPVDLKTAAKLACKTNLEDAKSKYPDLYEKDSVEYVCLDLVYVYTLLVD 407
Query: 226 GFGLDPFQEVTVANEIEYQDALVEAAWPLGTAIEAISSLPKFERLMYFI 80
GFGLDPFQEVTVANEIEYQDALVEAAWPLGTAIEAISSLPKFERLMYFI
Sbjct: 408 GFGLDPFQEVTVANEIEYQDALVEAAWPLGTAIEAISSLPKFERLMYFI 456
>gb|AAK15160.1|AF288132_1 putative apyrase [Medicago truncatula]
Length = 466
Score = 253 bits (645), Expect = 2e-66
Identities = 120/170 (70%), Positives = 139/170 (81%), Gaps = 1/170 (0%)
Frame = -3
Query: 586 APASGSNLNQCRKIALKALKVNAPCPYQNCTFGGIWNGGGGSGQKNLFLTSSFYYLSEDV 407
APASG+N N C+KI KALK+N PCPYQNCTFGGIWNGGGG+GQK+LF +SSF+YL EDV
Sbjct: 297 APASGANFNGCKKIIRKALKLNYPCPYQNCTFGGIWNGGGGNGQKHLFASSSFFYLPEDV 356
Query: 406 GIFVNK-PNAKIRPVDLKTAAKLACKTNLEDAKSKYPDLYEKDSVEYVCLDLVYVYTLLV 230
G+ K PN KIRPVDL + AK AC N EDAKS YP L +K+ YVC+DL+Y Y LLV
Sbjct: 357 GMVDPKTPNFKIRPVDLVSEAKKACALNFEDAKSTYPFLAKKNIASYVCMDLIYQYVLLV 416
Query: 229 DGFGLDPFQEVTVANEIEYQDALVEAAWPLGTAIEAISSLPKFERLMYFI 80
DGFGLDP QE+T EIEYQDA++EAAWPLG A+EAISSLPKFER+MYF+
Sbjct: 417 DGFGLDPLQEITSGKEIEYQDAVLEAAWPLGNAVEAISSLPKFERMMYFV 466
>gb|AAG32960.1|AF207688_1 apyrase GS52 [Glycine soja]
Length = 468
Score = 246 bits (627), Expect = 2e-64
Identities = 120/170 (70%), Positives = 141/170 (82%), Gaps = 1/170 (0%)
Frame = -3
Query: 586 APASGSNLNQCRKIALKALKVNAPCPYQNCTFGGIWNGGGGSGQKNLFLTSSFYYLSEDV 407
AP SGS+ ++CR++ L+ALK+N CP+QNCTFGGIW+GG GSGQK LF TSSFYYL ++
Sbjct: 300 APISGSSYDECREVVLQALKLNESCPHQNCTFGGIWDGGRGSGQKILFGTSSFYYLPTEI 359
Query: 406 GIF-VNKPNAKIRPVDLKTAAKLACKTNLEDAKSKYPDLYEKDSVEYVCLDLVYVYTLLV 230
GI +NKPN+KI PVDL+ AK AC+T LEDAKS YP+ E D + YVCLD+ Y Y L
Sbjct: 360 GIIDLNKPNSKIHPVDLEIEAKRACETKLEDAKSTYPNPAE-DRLPYVCLDIAYQYALYT 418
Query: 229 DGFGLDPFQEVTVANEIEYQDALVEAAWPLGTAIEAISSLPKFERLMYFI 80
DGF LDP+QE+TVANEIEYQDALVEAAWPLGTAIEAISSLPKF+RLMYFI
Sbjct: 419 DGFSLDPWQEITVANEIEYQDALVEAAWPLGTAIEAISSLPKFDRLMYFI 468
>gb|AAO23004.1| apyrase-like protein [Medicago truncatula]
Length = 467
Score = 244 bits (624), Expect = 4e-64
Identities = 117/171 (68%), Positives = 140/171 (81%), Gaps = 2/171 (1%)
Frame = -3
Query: 586 APASGSNLNQCRKIALKALKVNAPCPYQNCTFGGIWNGGGGSGQKNLFLTSSFYYLSEDV 407
APASG+N +C+KI +ALK+N PCPYQNCTFGGIW+GGGGSGQ+ LF SSF+YL+ED+
Sbjct: 297 APASGANFKKCKKIVREALKLNYPCPYQNCTFGGIWSGGGGSGQRILFAASSFFYLAEDI 356
Query: 406 GIF-VNKP-NAKIRPVDLKTAAKLACKTNLEDAKSKYPDLYEKDSVEYVCLDLVYVYTLL 233
G+ N P + +RPVDL+T AK AC NLE+AKS YP L + + VEYVC+DL+Y Y LL
Sbjct: 357 GLVDPNTPYSLTLRPVDLETEAKKACTLNLEEAKSTYPLLVDFNIVEYVCMDLIYQYVLL 416
Query: 232 VDGFGLDPFQEVTVANEIEYQDALVEAAWPLGTAIEAISSLPKFERLMYFI 80
VDGFGLDP QE+T +IEYQD+LVEAAWPLG A+EAISSLPKFERLMYFI
Sbjct: 417 VDGFGLDPLQEITAGKQIEYQDSLVEAAWPLGNAVEAISSLPKFERLMYFI 467
>gb|AAO23002.1| apyrase-like protein [Medicago truncatula]
Length = 454
Score = 244 bits (622), Expect = 8e-64
Identities = 118/170 (69%), Positives = 137/170 (80%), Gaps = 1/170 (0%)
Frame = -3
Query: 586 APASGSNLNQCRKIALKALKVNAPCPYQNCTFGGIWNGGGGSGQKNLFLTSSFYYLSEDV 407
APASG+N N C+KI KALK+N PCPYQNCTFGGIWNGGGG+GQK+LF +SSF+YL EDV
Sbjct: 287 APASGANFNGCKKIIRKALKLNYPCPYQNCTFGGIWNGGGGNGQKHLFASSSFFYLPEDV 346
Query: 406 GIFVNK-PNAKIRPVDLKTAAKLACKTNLEDAKSKYPDLYEKDSVEYVCLDLVYVYTLLV 230
G+ K PN KIRPVDL + AK AC N EDAKS YP L +K+ YVC+DL+Y Y LLV
Sbjct: 347 GMVDPKTPNFKIRPVDLVSEAKKACALNFEDAKSTYPFLAKKNIASYVCMDLIYQYVLLV 406
Query: 229 DGFGLDPFQEVTVANEIEYQDALVEAAWPLGTAIEAISSLPKFERLMYFI 80
DGF DP QE+T EIEYQDA++EAAWPLG A+EAISSLPKFER+MYF+
Sbjct: 407 DGF--DPLQEITSGKEIEYQDAVLEAAWPLGNAVEAISSLPKFERMMYFV 454
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 500,625,952
Number of Sequences: 1393205
Number of extensions: 11033479
Number of successful extensions: 34721
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 32188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34620
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
