Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005289A_C02 KMC005289A_c02
(1195 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q41350|OLP1_LYCES Osmotin-like protein precursor gi|2129934|p... 377 e-103
gb|AAM63209.1| putative thaumatin [Arabidopsis thaliana] 349 6e-95
ref|NP_180445.1| putative thaumatin; protein id: At2g28790.1, su... 349 6e-95
gb|AAO12210.1| cytokinin binding protein [Arabidopsis thaliana] 349 6e-95
gb|AAD53089.1|AF175270_1 osmotin-like protein [Benincasa hispida] 346 4e-94
>sp|Q41350|OLP1_LYCES Osmotin-like protein precursor gi|2129934|pir||JC5237 osmotin-like
protein precursor - tomato gi|1220537|gb|AAB41124.1|
osmotin-like protein [Lycopersicon esculentum]
Length = 252
Score = 377 bits (968), Expect = e-103
Identities = 166/223 (74%), Positives = 187/223 (83%)
Frame = -2
Query: 1119 LTLVNNCKYTVWPGIQPNAGHPVLAGGGFVLNPFTHLSIPVPDTHWSGRVWARTGCTYAA 940
LTLVNNC YT+WP IQPNAGHPVL GGF L+ TH S P P+ HWSGR+WARTGC Y
Sbjct: 31 LTLVNNCPYTIWPAIQPNAGHPVLERGGFTLHSLTHRSFPAPNAHWSGRIWARTGCNYQH 90
Query: 939 GNRFTCASGDCGGRLQCAGAGGSAPATLAQFDMHHGNADFSSYSVSLVDGFNVPMTVTPH 760
G +F CA+GDCGGR++C G GG+APATLAQF +HHG+ADFS+Y VSLVDGFN+P+TVTPH
Sbjct: 91 G-KFYCATGDCGGRIECDGLGGAAPATLAQFVLHHGHADFSTYGVSLVDGFNIPLTVTPH 149
Query: 759 EGKGVCPVVGCRSDLLATCPPVLHHRVPAVHGPVVACKSGCEAFHSDELCCRNHFNNAQT 580
EGKGVCPVVGCR++LL +CP VL R HGPVV CKS CEAF SDE CCRNH+N+ QT
Sbjct: 150 EGKGVCPVVGCRANLLESCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQT 209
Query: 579 CKPSVYSTFFKHACPATFTFAHDTPSLTHECSSPRELKVIFCH 451
CKPS YS FFKHACPATFT+AHD+PSL HECSSPRELKVIFCH
Sbjct: 210 CKPSSYSQFFKHACPATFTYAHDSPSLMHECSSPRELKVIFCH 252
>gb|AAM63209.1| putative thaumatin [Arabidopsis thaliana]
Length = 249
Score = 349 bits (895), Expect = 6e-95
Identities = 159/226 (70%), Positives = 184/226 (81%), Gaps = 1/226 (0%)
Frame = -2
Query: 1125 LFLTLVNNCKYTVWPGIQPNAGHPVLAGGGFVLNPFTHLSIPVPDTHWSGRVWARTGCTY 946
LFLT+VNNC +TVWP IQPNAGHPVL GGF L FTH S VP THWSGR+WART C +
Sbjct: 27 LFLTVVNNCPFTVWPAIQPNAGHPVLEKGGFALPTFTHRSFNVPTTHWSGRIWARTWCAH 86
Query: 945 AAGNRFTCASGDCGGRLQCAGAGGSAPATLAQFDMHHG-NADFSSYSVSLVDGFNVPMTV 769
G +F+C +GDCG RL+C G GG+ PA+LAQFD+HHG + DFSSY VSLVDG+NVPMTV
Sbjct: 87 YNG-KFSCLTGDCGNRLECNGLGGAPPASLAQFDLHHGGHHDFSSYGVSLVDGYNVPMTV 145
Query: 768 TPHEGKGVCPVVGCRSDLLATCPPVLHHRVPAVHGPVVACKSGCEAFHSDELCCRNHFNN 589
TPHEG GVCPVVGCR DL+ TCP H +V + G VVACKSGCEAFH+DELCCR H+N+
Sbjct: 146 TPHEGHGVCPVVGCREDLIKTCPA--HLQVRSHSGHVVACKSGCEAFHTDELCCRGHYNS 203
Query: 588 AQTCKPSVYSTFFKHACPATFTFAHDTPSLTHECSSPRELKVIFCH 451
TCK S +S FFKHACP++FTFAHD+PSL H+C+SPRELKVIFCH
Sbjct: 204 PNTCKASSHSLFFKHACPSSFTFAHDSPSLMHDCASPRELKVIFCH 249
>ref|NP_180445.1| putative thaumatin; protein id: At2g28790.1, supported by cDNA: 2058.
[Arabidopsis thaliana] gi|25296202|pir||H84688 probable
thaumatin [imported] - Arabidopsis thaliana
gi|3927827|gb|AAC79584.1| putative thaumatin [Arabidopsis
thaliana] gi|26452026|dbj|BAC43103.1| putative thaumatin
[Arabidopsis thaliana]
Length = 249
Score = 349 bits (895), Expect = 6e-95
Identities = 159/226 (70%), Positives = 184/226 (81%), Gaps = 1/226 (0%)
Frame = -2
Query: 1125 LFLTLVNNCKYTVWPGIQPNAGHPVLAGGGFVLNPFTHLSIPVPDTHWSGRVWARTGCTY 946
LFLT+VNNC +TVWP IQPNAGHPVL GGF L FTH S VP THWSGR+WART C +
Sbjct: 27 LFLTVVNNCPFTVWPAIQPNAGHPVLEKGGFALPTFTHRSFNVPTTHWSGRIWARTWCAH 86
Query: 945 AAGNRFTCASGDCGGRLQCAGAGGSAPATLAQFDMHHG-NADFSSYSVSLVDGFNVPMTV 769
G +F+C +GDCG RL+C G GG+ PA+LAQFD+HHG + DFSSY VSLVDG+NVPMTV
Sbjct: 87 YNG-KFSCLTGDCGNRLECNGLGGAPPASLAQFDLHHGGHHDFSSYGVSLVDGYNVPMTV 145
Query: 768 TPHEGKGVCPVVGCRSDLLATCPPVLHHRVPAVHGPVVACKSGCEAFHSDELCCRNHFNN 589
TPHEG GVCPVVGCR DL+ TCP H +V + G VVACKSGCEAFH+DELCCR H+N+
Sbjct: 146 TPHEGHGVCPVVGCREDLIKTCPA--HLQVRSHSGHVVACKSGCEAFHTDELCCRGHYNS 203
Query: 588 AQTCKPSVYSTFFKHACPATFTFAHDTPSLTHECSSPRELKVIFCH 451
TCK S +S FFKHACP++FTFAHD+PSL H+C+SPRELKVIFCH
Sbjct: 204 PNTCKASSHSLFFKHACPSSFTFAHDSPSLMHDCASPRELKVIFCH 249
>gb|AAO12210.1| cytokinin binding protein [Arabidopsis thaliana]
Length = 249
Score = 349 bits (895), Expect = 6e-95
Identities = 159/226 (70%), Positives = 184/226 (81%), Gaps = 1/226 (0%)
Frame = -2
Query: 1125 LFLTLVNNCKYTVWPGIQPNAGHPVLAGGGFVLNPFTHLSIPVPDTHWSGRVWARTGCTY 946
LFLT+VNNC +TVWP IQPNAGHPVL GGF L FTH S VP THWSGR+WART C +
Sbjct: 27 LFLTVVNNCPFTVWPAIQPNAGHPVLEKGGFALPTFTHRSFNVPTTHWSGRIWARTWCAH 86
Query: 945 AAGNRFTCASGDCGGRLQCAGAGGSAPATLAQFDMHHG-NADFSSYSVSLVDGFNVPMTV 769
G +F+C +GDCG RL+C G GG+ PA+LAQFD+HHG + DFSSY VSLVDG+NVPMTV
Sbjct: 87 YNG-KFSCLTGDCGNRLECNGLGGAPPASLAQFDLHHGGHHDFSSYGVSLVDGYNVPMTV 145
Query: 768 TPHEGKGVCPVVGCRSDLLATCPPVLHHRVPAVHGPVVACKSGCEAFHSDELCCRNHFNN 589
TPHEG GVCPVVGCR DL+ TCP H +V + G VVACKSGCEAFH+DELCCR H+N+
Sbjct: 146 TPHEGHGVCPVVGCREDLIKTCPA--HLQVRSHSGHVVACKSGCEAFHTDELCCRGHYNS 203
Query: 588 AQTCKPSVYSTFFKHACPATFTFAHDTPSLTHECSSPRELKVIFCH 451
TCK S +S FFKHACP++FTFAHD+PSL H+C+SPRELKVIFCH
Sbjct: 204 PNTCKASSHSLFFKHACPSSFTFAHDSPSLMHDCASPRELKVIFCH 249
>gb|AAD53089.1|AF175270_1 osmotin-like protein [Benincasa hispida]
Length = 248
Score = 346 bits (888), Expect = 4e-94
Identities = 154/229 (67%), Positives = 177/229 (77%)
Frame = -2
Query: 1137 PSHALFLTLVNNCKYTVWPGIQPNAGHPVLAGGGFVLNPFTHLSIPVPDTHWSGRVWART 958
P L LTLVNNC Y +WP IQPNAGHPV GGF L +H S P P HWSGRVWART
Sbjct: 21 PGGGLILTLVNNCPYPIWPAIQPNAGHPVPERGGFFLPSLSHRSFPAPYQHWSGRVWART 80
Query: 957 GCTYAAGNRFTCASGDCGGRLQCAGAGGSAPATLAQFDMHHGNADFSSYSVSLVDGFNVP 778
GC N TC +GDCGG+L+C GAGG PATLAQF +HHG+ DFSSY VSLVDGFN+P
Sbjct: 81 GCVGDL-NYLTCQTGDCGGKLECNGAGGKTPATLAQFSLHHGHKDFSSYGVSLVDGFNIP 139
Query: 777 MTVTPHEGKGVCPVVGCRSDLLATCPPVLHHRVPAVHGPVVACKSGCEAFHSDELCCRNH 598
+T+TPHEG GVCPVVGC+++LL TCP L P +G V+ACKSGCEAF++D LCCR H
Sbjct: 140 LTITPHEGHGVCPVVGCKANLLQTCPRELQVHAPQRYGQVIACKSGCEAFNTDALCCRGH 199
Query: 597 FNNAQTCKPSVYSTFFKHACPATFTFAHDTPSLTHECSSPRELKVIFCH 451
+N+ QTCK S S FFKHACP+TFT+AHDTPSL HEC++PRELKVIFCH
Sbjct: 200 YNSPQTCKASSCSLFFKHACPSTFTYAHDTPSLMHECAAPRELKVIFCH 248
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,149,029,952
Number of Sequences: 1393205
Number of extensions: 31872534
Number of successful extensions: 575183
Number of sequences better than 10.0: 15697
Number of HSP's better than 10.0 without gapping: 162515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370867
length of database: 448,689,247
effective HSP length: 125
effective length of database: 274,538,622
effective search space used: 74674505184
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
