Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005288A_C01 KMC005288A_c01
(571 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA75308.1| annexin [Medicago truncatula] gi|22859608|emb|CA... 256 1e-67
sp|P51074|ANX4_FRAAN Annexin-like protein RJ4 gi|6010777|gb|AAF0... 234 7e-61
ref|NP_568271.2| annexin-like protein; protein id: At5g12380.1 [... 195 4e-49
emb|CAA66900.2| annexin p33 [Zea mays] 188 4e-47
pir||T02961 annexin P33 - maize 188 4e-47
>emb|CAA75308.1| annexin [Medicago truncatula] gi|22859608|emb|CAD29698.1| annexin
[Medicago truncatula]
Length = 313
Score = 256 bits (655), Expect = 1e-67
Identities = 132/175 (75%), Positives = 149/175 (84%)
Frame = +1
Query: 46 MATLIATTQHSPVADAEALRNAFQGWGTDEKTVIAILGHRSVHQRQQIRKAYEELYQEDI 225
MATL A + HSP DAEALR AF+GWGTDEKTVI ILGHR+ +Q QQIRKAYE +Y ED+
Sbjct: 1 MATLSAPSNHSPNEDAEALRKAFEGWGTDEKTVITILGHRNSNQIQQIRKAYEGIYNEDL 60
Query: 226 IKRLESELSGDIEKAVYRWMLEPTDRDAVLANVAIKSGGKGYNVIVEIATVLSPEEVLAV 405
IKRLESE+ GD EKAVYRW+LEP +RDAVLANVAIKS GK YNVIVEI+ VLSPEE+L V
Sbjct: 61 IKRLESEIKGDFEKAVYRWILEPAERDAVLANVAIKS-GKNYNVIVEISAVLSPEELLNV 119
Query: 406 RRAYHNRYKRSLEEDVAAHTTGDLRQLWVGLVSSFRYGGDEINARLAKTEADILH 570
RRAY RYK SLEED+AAHT+G LRQL VGLV++FRY GDEIN +LA+TEA ILH
Sbjct: 120 RRAYVKRYKHSLEEDLAAHTSGHLRQLLVGLVTAFRYVGDEINPKLAQTEAGILH 174
Score = 38.9 bits (89), Expect = 0.046
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Frame = +1
Query: 145 IAILGHRSVHQRQQIRKAYEELYQEDIIKRLESELSGDIEKAVYRWMLEPTDRDAVLANV 324
I IL RS Q Y E + I K+L E S + +KA+Y + D V
Sbjct: 188 IRILTTRSKTQLIATFNRYRETHGTSITKKLLDEGSDEFQKALYTTIRSFNDHVKYYEKV 247
Query: 325 ---AIKSGGKGYNVIVEIATVLSPEEVLAVRRAYHNRYKRSLEEDVAAHTTGDLRQLWVG 495
AIK G + + + + ++ + Y+ R LE VA T+GD ++ +
Sbjct: 248 VRDAIKKVGTDEDALTRVIVSRAQHDLKVISDVYYKRNSVLLEHVVAKETSGDYKKFLLT 307
Query: 496 LV 501
L+
Sbjct: 308 LL 309
>sp|P51074|ANX4_FRAAN Annexin-like protein RJ4 gi|6010777|gb|AAF01250.1| annexin
[Fragaria x ananassa]
Length = 314
Score = 234 bits (596), Expect = 7e-61
Identities = 115/175 (65%), Positives = 142/175 (80%)
Frame = +1
Query: 46 MATLIATTQHSPVADAEALRNAFQGWGTDEKTVIAILGHRSVHQRQQIRKAYEELYQEDI 225
MATL++ DAEALR + +GWGT+EK +I+ILGHR+ QR++IR AYE+LYQED+
Sbjct: 1 MATLVSPPNFCAKEDAEALRKSVKGWGTNEKAIISILGHRNAGQRKEIRAAYEQLYQEDL 60
Query: 226 IKRLESELSGDIEKAVYRWMLEPTDRDAVLANVAIKSGGKGYNVIVEIATVLSPEEVLAV 405
+K LESELSGD EKAVYRW L+P DRDAVLANVAIK YNVI+EI+ + SPEE+LAV
Sbjct: 61 LKPLESELSGDFEKAVYRWTLDPADRDAVLANVAIKKSTDVYNVIIEISCIHSPEELLAV 120
Query: 406 RRAYHNRYKRSLEEDVAAHTTGDLRQLWVGLVSSFRYGGDEINARLAKTEADILH 570
RRAY RYK S+EED+AAHTTGD+R+L V LV+++RY G EINA+LA +EADILH
Sbjct: 121 RRAYQLRYKHSVEEDLAAHTTGDIRKLLVALVTAYRYDGHEINAKLANSEADILH 175
>ref|NP_568271.2| annexin-like protein; protein id: At5g12380.1 [Arabidopsis
thaliana]
Length = 316
Score = 195 bits (495), Expect = 4e-49
Identities = 93/175 (53%), Positives = 136/175 (77%)
Frame = +1
Query: 46 MATLIATTQHSPVADAEALRNAFQGWGTDEKTVIAILGHRSVHQRQQIRKAYEELYQEDI 225
MAT+++ SPV DAE ++ A QGWGT+E +I+ILGHR++ QR+ IR+AY+E+Y ED+
Sbjct: 1 MATIVSPPHFSPVEDAENIKAACQGWGTNENAIISILGHRNLFQRKLIRQAYQEIYHEDL 60
Query: 226 IKRLESELSGDIEKAVYRWMLEPTDRDAVLANVAIKSGGKGYNVIVEIATVLSPEEVLAV 405
I +L+SELSG+ E+A+ W+L+P +RDA+LAN+A++ Y V+VEIA + SPE++LA
Sbjct: 61 IHQLKSELSGNFERAICLWVLDPPERDALLANLALQKPIPDYKVLVEIACMRSPEDMLAA 120
Query: 406 RRAYHNRYKRSLEEDVAAHTTGDLRQLWVGLVSSFRYGGDEINARLAKTEADILH 570
RRAY YK SLEED+A+ T GD+R+L V +VS+++Y G+EI+ LA++EA ILH
Sbjct: 121 RRAYRCLYKHSLEEDLASRTIGDIRRLLVAMVSAYKYDGEEIDEMLAQSEAAILH 175
>emb|CAA66900.2| annexin p33 [Zea mays]
Length = 314
Score = 188 bits (478), Expect = 4e-47
Identities = 94/176 (53%), Positives = 123/176 (69%), Gaps = 1/176 (0%)
Frame = +1
Query: 46 MATLIATTQHSPVAD-AEALRNAFQGWGTDEKTVIAILGHRSVHQRQQIRKAYEELYQED 222
MATL PVAD + LR AFQGWGT+E +I+ILGHR QR+ IR+AY E Y E+
Sbjct: 1 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHRDAAQRRAIRRAYAEAYGEE 60
Query: 223 IIKRLESELSGDIEKAVYRWMLEPTDRDAVLANVAIKSGGKGYNVIVEIATVLSPEEVLA 402
+++ + E+SGD E+AV W L+P +RDAVLAN A + G V+VEIA + ++ A
Sbjct: 61 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 120
Query: 403 VRRAYHNRYKRSLEEDVAAHTTGDLRQLWVGLVSSFRYGGDEINARLAKTEADILH 570
R+AYH R+KRSLEED+AAH TGD R+L V LVS++RY G E+N RLA +EA +LH
Sbjct: 121 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLH 176
>pir||T02961 annexin P33 - maize
Length = 314
Score = 188 bits (478), Expect = 4e-47
Identities = 94/176 (53%), Positives = 123/176 (69%), Gaps = 1/176 (0%)
Frame = +1
Query: 46 MATLIATTQHSPVAD-AEALRNAFQGWGTDEKTVIAILGHRSVHQRQQIRKAYEELYQED 222
MATL PVAD + LR AFQGWGT+E +I+ILGHR QR+ IR+AY E Y E+
Sbjct: 1 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHRDAAQRRAIRRAYAEAYGEE 60
Query: 223 IIKRLESELSGDIEKAVYRWMLEPTDRDAVLANVAIKSGGKGYNVIVEIATVLSPEEVLA 402
+++ + E+SGD E+AV W L+P +RDAVLAN A + G V+VEIA + ++ A
Sbjct: 61 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 120
Query: 403 VRRAYHNRYKRSLEEDVAAHTTGDLRQLWVGLVSSFRYGGDEINARLAKTEADILH 570
R+AYH R+KRSLEED+AAH TGD R+L V LVS++RY G E+N RLA +EA +LH
Sbjct: 121 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLH 176
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 500,590,988
Number of Sequences: 1393205
Number of extensions: 10429713
Number of successful extensions: 30246
Number of sequences better than 10.0: 320
Number of HSP's better than 10.0 without gapping: 28368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29939
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20956655091
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
