Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005284A_C01 KMC005284A_c01
(619 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD52015.1|AF082862_1 unknown [Pisum sativum] 245 3e-64
ref|NP_196179.1| leucoanthocyanidin dioxygenase-like protein; pr... 218 4e-56
gb|AAM61665.1| leucoanthocyanidin dioxygenase-like protein [Arab... 216 1e-55
ref|NP_187728.1| putative leucoanthocyanidin dioxygenase; protei... 215 3e-55
gb|AAM63604.1| putative anthocyanidin synthase [Arabidopsis thal... 211 5e-54
>gb|AAD52015.1|AF082862_1 unknown [Pisum sativum]
Length = 134
Score = 245 bits (626), Expect = 3e-64
Identities = 117/132 (88%), Positives = 127/132 (95%)
Frame = -2
Query: 588 LGLSPHSDPGGLTILLPDDFVSGLQVRKGNYWITVKPVPNAFIINIGDQIQVLSNTIYKS 409
+GL+PH+DPGG+TILLPDDFVSGLQVRKGN WITVKPVPNAFIINIGDQIQV+SN IYKS
Sbjct: 2 MGLAPHTDPGGMTILLPDDFVSGLQVRKGNDWITVKPVPNAFIINIGDQIQVMSNAIYKS 61
Query: 408 VEHRVIVNSNQDRVSLAMFYNPKSDLLIEPAKELVTEEKPALYPPMTYDEYRLYIRRQGP 229
VEHRVIVN QDRVSLAMFYNPKSDL+I+PAKELVT+E+PALYPPMTYDEYRLYIR +GP
Sbjct: 62 VEHRVIVNPTQDRVSLAMFYNPKSDLIIQPAKELVTKERPALYPPMTYDEYRLYIRMKGP 121
Query: 228 CGKAQVESLASQ 193
CGKAQVESLASQ
Sbjct: 122 CGKAQVESLASQ 133
>ref|NP_196179.1| leucoanthocyanidin dioxygenase-like protein; protein id:
At5g05600.1, supported by cDNA: 13012., supported by
cDNA: gi_14532537 [Arabidopsis thaliana]
gi|10178137|dbj|BAB11549.1| leucoanthocyanidin
dioxygenase-like protein [Arabidopsis thaliana]
gi|14532538|gb|AAK63997.1| AT5g05600/MOP10_14
[Arabidopsis thaliana] gi|22137300|gb|AAM91495.1|
AT5g05600/MOP10_14 [Arabidopsis thaliana]
Length = 371
Score = 218 bits (556), Expect = 4e-56
Identities = 102/138 (73%), Positives = 121/138 (86%)
Frame = -2
Query: 618 YPKCPQPDLTLGLSPHSDPGGLTILLPDDFVSGLQVRKGNYWITVKPVPNAFIINIGDQI 439
YPKCP+P+L LGLSPHSDPGG+TILLPDD V GLQVRK + WITVKP P+AFI+NIGDQI
Sbjct: 229 YPKCPRPELALGLSPHSDPGGMTILLPDDQVFGLQVRKDDTWITVKPHPHAFIVNIGDQI 288
Query: 438 QVLSNTIYKSVEHRVIVNSNQDRVSLAMFYNPKSDLLIEPAKELVTEEKPALYPPMTYDE 259
Q+LSN+ YKSVEHRVIVNS+++RVSLA FYNPKSD+ I+P +ELV+ P LYPPMT+D+
Sbjct: 289 QILSNSTYKSVEHRVIVNSDKERVSLAFFYNPKSDIPIQPLQELVSTHNPPLYPPMTFDQ 348
Query: 258 YRLYIRRQGPCGKAQVES 205
YRL+IR QGP GK+ VES
Sbjct: 349 YRLFIRTQGPQGKSHVES 366
>gb|AAM61665.1| leucoanthocyanidin dioxygenase-like protein [Arabidopsis thaliana]
Length = 355
Score = 216 bits (551), Expect = 1e-55
Identities = 102/138 (73%), Positives = 120/138 (86%)
Frame = -2
Query: 618 YPKCPQPDLTLGLSPHSDPGGLTILLPDDFVSGLQVRKGNYWITVKPVPNAFIINIGDQI 439
YPKCP+P L LGLSPHSDPGG+TILLPDD V GLQVRK + WITVKP P+AFI+NIGDQI
Sbjct: 213 YPKCPRPVLALGLSPHSDPGGMTILLPDDQVFGLQVRKDDTWITVKPHPHAFIVNIGDQI 272
Query: 438 QVLSNTIYKSVEHRVIVNSNQDRVSLAMFYNPKSDLLIEPAKELVTEEKPALYPPMTYDE 259
Q+LSN+ YKSVEHRVIVNS+++RVSLA FYNPKSD+ I+P +ELV+ P LYPPMT+D+
Sbjct: 273 QILSNSTYKSVEHRVIVNSDKERVSLAFFYNPKSDIPIQPLQELVSTHNPPLYPPMTFDQ 332
Query: 258 YRLYIRRQGPCGKAQVES 205
YRL+IR QGP GK+ VES
Sbjct: 333 YRLFIRTQGPQGKSHVES 350
>ref|NP_187728.1| putative leucoanthocyanidin dioxygenase; protein id: At3g11180.1
[Arabidopsis thaliana]
gi|6016680|gb|AAF01507.1|AC009991_3 putative
leucoanthocyanidin dioxygenase [Arabidopsis thaliana]
gi|12321884|gb|AAG50980.1|AC073395_22 leucoanthocyanidin
dioxygenase, putative; 41415-43854 [Arabidopsis
thaliana]
Length = 400
Score = 215 bits (548), Expect = 3e-55
Identities = 101/138 (73%), Positives = 119/138 (86%)
Frame = -2
Query: 618 YPKCPQPDLTLGLSPHSDPGGLTILLPDDFVSGLQVRKGNYWITVKPVPNAFIINIGDQI 439
YPKCPQP+L LGLSPHSDPGG+TILLPDD V GLQVR G+ WITV P+ +AFI+NIGDQI
Sbjct: 258 YPKCPQPELALGLSPHSDPGGMTILLPDDQVVGLQVRHGDTWITVNPLRHAFIVNIGDQI 317
Query: 438 QVLSNTIYKSVEHRVIVNSNQDRVSLAMFYNPKSDLLIEPAKELVTEEKPALYPPMTYDE 259
Q+LSN+ YKSVEHRVIVNS ++RVSLA FYNPKSD+ I+P ++LVT P LYPPMT+D+
Sbjct: 318 QILSNSKYKSVEHRVIVNSEKERVSLAFFYNPKSDIPIQPMQQLVTSTMPPLYPPMTFDQ 377
Query: 258 YRLYIRRQGPCGKAQVES 205
YRL+IR QGP GK+ VES
Sbjct: 378 YRLFIRTQGPRGKSHVES 395
>gb|AAM63604.1| putative anthocyanidin synthase [Arabidopsis thaliana]
Length = 353
Score = 211 bits (538), Expect = 5e-54
Identities = 97/139 (69%), Positives = 119/139 (84%)
Frame = -2
Query: 618 YPKCPQPDLTLGLSPHSDPGGLTILLPDDFVSGLQVRKGNYWITVKPVPNAFIINIGDQI 439
YPKCPQP LTLGLS HSDPGG+TILLPD+ V+GLQVR+G+ W+T+K VPNA I+NIGDQ+
Sbjct: 211 YPKCPQPQLTLGLSSHSDPGGITILLPDEKVAGLQVRRGDGWVTIKSVPNALIVNIGDQL 270
Query: 438 QVLSNTIYKSVEHRVIVNSNQDRVSLAMFYNPKSDLLIEPAKELVTEEKPALYPPMTYDE 259
Q+LSN IYKSVEH+VIVNS +RVSLA FYNP+SD+ + P +ELVT +PALY P+ +DE
Sbjct: 271 QILSNGIYKSVEHQVIVNSGMERVSLAFFYNPRSDIPVGPIEELVTANRPALYKPIRFDE 330
Query: 258 YRLYIRRQGPCGKAQVESL 202
YR IR++GPCGK QV+SL
Sbjct: 331 YRSLIRQKGPCGKNQVDSL 349
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 550,792,718
Number of Sequences: 1393205
Number of extensions: 11957476
Number of successful extensions: 30152
Number of sequences better than 10.0: 654
Number of HSP's better than 10.0 without gapping: 28762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29745
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 24733321959
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
