Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005283A_C01 KMC005283A_c01
(592 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA92225.1| similar to the BURP domain [Vigna unguiculata] 195 3e-49
gb|AAL67991.1| dehydration-induced protein RD22-like protein [Go... 186 2e-46
gb|AAL26909.1|AF319165_1 dehydration-responsive protein RD22 [Pr... 178 4e-44
dbj|BAB60848.1| BURP domain-containing protein [Bruguiera gymnor... 173 2e-42
dbj|BAB60849.1| BURP domain-containing protein [Bruguiera gymnor... 170 1e-41
>dbj|BAA92225.1| similar to the BURP domain [Vigna unguiculata]
Length = 132
Score = 195 bits (496), Expect = 3e-49
Identities = 90/111 (81%), Positives = 101/111 (90%)
Frame = -2
Query: 588 VSTVVDKETEKQRYTIATGVKKLEAGDKAVVCHKQNYPYAVFYCHKSDSTRAYSVPLEGD 409
+ST VD+ET Q+YTIA GVKK+ +GD AVVCHKQ+YPYAVFYCHK+++TR Y VPLEG
Sbjct: 23 LSTEVDQETGLQQYTIAPGVKKV-SGDNAVVCHKQSYPYAVFYCHKTETTRTYPVPLEGA 81
Query: 408 NGVRVKAVAVCHTDTSQWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVWVSK 256
NG+RVKAVAVCHTDTSQWNPKHLAF+VLKVKPGTVPVCHFLPEDHVVWV K
Sbjct: 82 NGIRVKAVAVCHTDTSQWNPKHLAFEVLKVKPGTVPVCHFLPEDHVVWVQK 132
>gb|AAL67991.1| dehydration-induced protein RD22-like protein [Gossypium hirsutum]
Length = 335
Score = 186 bits (472), Expect = 2e-46
Identities = 85/112 (75%), Positives = 97/112 (85%)
Frame = -2
Query: 591 AVSTVVDKETEKQRYTIATGVKKLEAGDKAVVCHKQNYPYAVFYCHKSDSTRAYSVPLEG 412
AVST V+K+T Q+YTIA GV+K+ DKAVVCHKQNY YAVFYCHKS++TRAY VPLEG
Sbjct: 225 AVSTEVEKQTPMQKYTIAAGVQKM-TDDKAVVCHKQNYAYAVFYCHKSETTRAYMVPLEG 283
Query: 411 DNGVRVKAVAVCHTDTSQWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVWVSK 256
+G + KAVAVCHTDTS WNPKHLAFQVLKV+PGT+PVCHFLP DH+VWV K
Sbjct: 284 ADGTKAKAVAVCHTDTSAWNPKHLAFQVLKVEPGTIPVCHFLPRDHIVWVPK 335
>gb|AAL26909.1|AF319165_1 dehydration-responsive protein RD22 [Prunus persica]
Length = 349
Score = 178 bits (452), Expect = 4e-44
Identities = 82/112 (73%), Positives = 94/112 (83%)
Frame = -2
Query: 591 AVSTVVDKETEKQRYTIATGVKKLEAGDKAVVCHKQNYPYAVFYCHKSDSTRAYSVPLEG 412
A+ST +K Q+YTI GVKKL AG K+VVCHKQ YPYAVFYCH + +TRAY VPL+G
Sbjct: 236 AISTEAEKGATLQKYTITPGVKKLAAG-KSVVCHKQTYPYAVFYCHATKTTRAYVVPLKG 294
Query: 411 DNGVRVKAVAVCHTDTSQWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVWVSK 256
+G+ KAVAVCHTDTS+WNPKHLAFQVLKVKPGTVPVCHFLP+DH+VWV K
Sbjct: 295 ADGLEAKAVAVCHTDTSEWNPKHLAFQVLKVKPGTVPVCHFLPKDHIVWVPK 346
>dbj|BAB60848.1| BURP domain-containing protein [Bruguiera gymnorrhiza]
Length = 346
Score = 173 bits (438), Expect = 2e-42
Identities = 81/112 (72%), Positives = 96/112 (85%)
Frame = -2
Query: 591 AVSTVVDKETEKQRYTIATGVKKLEAGDKAVVCHKQNYPYAVFYCHKSDSTRAYSVPLEG 412
A+ST V+K+T +Q+YTIA GVKK AGDK+VVCHKQNYPYAVFYCH + STRAY V L+G
Sbjct: 237 AISTEVEKQTGRQQYTIA-GVKKT-AGDKSVVCHKQNYPYAVFYCHSTQSTRAYLVQLKG 294
Query: 411 DNGVRVKAVAVCHTDTSQWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVWVSK 256
+ R++AVA+CHT+TS WNPKHLAFQVL VKPGTVP+CHFLP+ HVVWV K
Sbjct: 295 ADRTRLQAVAICHTNTSAWNPKHLAFQVLAVKPGTVPICHFLPQSHVVWVPK 346
>dbj|BAB60849.1| BURP domain-containing protein [Bruguiera gymnorrhiza]
Length = 336
Score = 170 bits (430), Expect = 1e-41
Identities = 80/112 (71%), Positives = 94/112 (83%)
Frame = -2
Query: 591 AVSTVVDKETEKQRYTIATGVKKLEAGDKAVVCHKQNYPYAVFYCHKSDSTRAYSVPLEG 412
A+ST V+K+T +Q+YTIA GVKK+ AGDK VVCHKQNYPYAVFYCH STRAY V L+G
Sbjct: 227 AISTEVEKQTGRQKYTIA-GVKKI-AGDKCVVCHKQNYPYAVFYCHSIQSTRAYLVQLKG 284
Query: 411 DNGVRVKAVAVCHTDTSQWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVWVSK 256
+ R++AVA+CHT+TS WNPKH AFQVL VKPGTVP+CHFLP+ HVVWV K
Sbjct: 285 VDRTRLQAVAICHTNTSAWNPKHPAFQVLAVKPGTVPICHFLPQSHVVWVPK 336
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 529,774,374
Number of Sequences: 1393205
Number of extensions: 11704373
Number of successful extensions: 37162
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 35800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37108
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22569056698
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
