Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005275A_C02 KMC005275A_c02
(571 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO22558.1| sedoheptulose-1,7-bisphosphatase precursor [Oryza... 221 5e-57
sp|O20252|S17P_SPIOL Sedoheptulose-1,7-bisphosphatase, chloropla... 219 1e-56
ref|NP_191139.1| sedoheptulose-bisphosphatase precursor; protein... 216 1e-55
gb|AAK96860.1| sedoheptulose-bisphosphatase precursor [Arabidops... 216 1e-55
sp|P46285|S17P_WHEAT Sedoheptulose-1,7-bisphosphatase, chloropla... 214 6e-55
>gb|AAO22558.1| sedoheptulose-1,7-bisphosphatase precursor [Oryza sativa (indica
cultivar-group)] gi|27804772|gb|AAO22559.1|
sedoheptulose-1,7-bisphosphatase precursor [Oryza sativa
(indica cultivar-group)]
Length = 392
Score = 221 bits (563), Expect = 5e-57
Identities = 112/130 (86%), Positives = 119/130 (91%)
Frame = -1
Query: 571 NLRATSDNPNYAKLIDYYVNEKYTLRYTGGMVPDVNQIIVKEKGIFTNVSSPSAKAKLRL 392
NLRAT DNP Y KLI+YYV EKYTLRYTGGMVPDVNQIIVKEKGIFTNV+SP+AKAKLRL
Sbjct: 263 NLRATFDNPEYDKLINYYVKEKYTLRYTGGMVPDVNQIIVKEKGIFTNVTSPTAKAKLRL 322
Query: 391 LFEVAPLGFLIEKAGGYSSDGHKSVLDIVIDNIDDRTQVAYGSKNEIIRFEETLYGSSRL 212
LFEVAPLGFLIEKAGGYSSDG +SVLD VI+N+D+RTQVAYGSKNEIIRFEETLYGSSRL
Sbjct: 323 LFEVAPLGFLIEKAGGYSSDGKQSVLDKVINNLDERTQVAYGSKNEIIRFEETLYGSSRL 382
Query: 211 KGAVPVGAAA 182
VGAAA
Sbjct: 383 TAGATVGAAA 392
>sp|O20252|S17P_SPIOL Sedoheptulose-1,7-bisphosphatase, chloroplast precursor
(Sedoheptulose-bisphosphatase) (SBPASE) (SED(1,7)P2ASE)
gi|7484686|pir||T09086 sedoheptulose-bisphosphatase (EC
3.1.3.37) precursor, chloroplast - spinach
gi|2529376|gb|AAB81104.1|
sedoheptulose-1,7-bisphosphatase [Spinacia oleracea]
Length = 387
Score = 219 bits (559), Expect = 1e-56
Identities = 111/130 (85%), Positives = 120/130 (91%)
Frame = -1
Query: 571 NLRATSDNPNYAKLIDYYVNEKYTLRYTGGMVPDVNQIIVKEKGIFTNVSSPSAKAKLRL 392
NLRATSDN +YAKLI YY+ EKYTLRYTGGMVPDVNQIIVKEKGIFTNV SP+AKAKLRL
Sbjct: 258 NLRATSDNADYAKLIQYYIKEKYTLRYTGGMVPDVNQIIVKEKGIFTNVISPTAKAKLRL 317
Query: 391 LFEVAPLGFLIEKAGGYSSDGHKSVLDIVIDNIDDRTQVAYGSKNEIIRFEETLYGSSRL 212
LFEVAPLGFLIEKAGG+SS+G KSVLDI + N+DDRTQVAYGS NEIIRFE+TLYGSSRL
Sbjct: 318 LFEVAPLGFLIEKAGGHSSEGTKSVLDIEVKNLDDRTQVAYGSLNEIIRFEKTLYGSSRL 377
Query: 211 KGAVPVGAAA 182
+ VPVGAAA
Sbjct: 378 EEPVPVGAAA 387
>ref|NP_191139.1| sedoheptulose-bisphosphatase precursor; protein id: At3g55800.1,
supported by cDNA: gi_15451177 [Arabidopsis thaliana]
gi|1173345|sp|P46283|S17P_ARATH
Sedoheptulose-1,7-bisphosphatase, chloroplast precursor
(Sedoheptulose-bisphosphatase) (SBPASE) (SED(1,7)P2ASE)
gi|1076403|pir||S51838 sedoheptulose-bisphosphatase (EC
3.1.3.37) precursor - Arabidopsis thaliana
gi|786466|gb|AAB33001.1|
sedoheptulose-1,7-bisphosphatase; SBPase [Arabidopsis
thaliana] gi|7263568|emb|CAB81605.1|
sedoheptulose-bisphosphatase precursor [Arabidopsis
thaliana]
Length = 393
Score = 216 bits (551), Expect = 1e-55
Identities = 110/130 (84%), Positives = 117/130 (89%)
Frame = -1
Query: 571 NLRATSDNPNYAKLIDYYVNEKYTLRYTGGMVPDVNQIIVKEKGIFTNVSSPSAKAKLRL 392
NLRAT DN Y+KLIDYYV EKYTLRYTGGMVPDVNQIIVKEKGIFTNV+SP+AKAKLRL
Sbjct: 265 NLRATFDNSEYSKLIDYYVKEKYTLRYTGGMVPDVNQIIVKEKGIFTNVTSPTAKAKLRL 324
Query: 391 LFEVAPLGFLIEKAGGYSSDGHKSVLDIVIDNIDDRTQVAYGSKNEIIRFEETLYGSSRL 212
LFEVAPLG LIE AGG+SSDGHKSVLD I N+DDRTQVAYGSKNEIIRFEETLYG+SRL
Sbjct: 325 LFEVAPLGLLIENAGGFSSDGHKSVLDKTIINLDDRTQVAYGSKNEIIRFEETLYGTSRL 384
Query: 211 KGAVPVGAAA 182
K VP+G A
Sbjct: 385 KN-VPIGVTA 393
>gb|AAK96860.1| sedoheptulose-bisphosphatase precursor [Arabidopsis thaliana]
gi|22136118|gb|AAM91137.1| sedoheptulose-bisphosphatase
precursor [Arabidopsis thaliana]
Length = 393
Score = 216 bits (551), Expect = 1e-55
Identities = 110/130 (84%), Positives = 117/130 (89%)
Frame = -1
Query: 571 NLRATSDNPNYAKLIDYYVNEKYTLRYTGGMVPDVNQIIVKEKGIFTNVSSPSAKAKLRL 392
NLRAT DN Y+KLIDYYV EKYTLRYTGGMVPDVNQIIVKEKGIFTNV+SP+AKAKLRL
Sbjct: 265 NLRATFDNSEYSKLIDYYVKEKYTLRYTGGMVPDVNQIIVKEKGIFTNVTSPTAKAKLRL 324
Query: 391 LFEVAPLGFLIEKAGGYSSDGHKSVLDIVIDNIDDRTQVAYGSKNEIIRFEETLYGSSRL 212
LFEVAPLG LIE AGG+SSDGHKSVLD I N+DDRTQVAYGSKNEIIRFEETLYG+SRL
Sbjct: 325 LFEVAPLGLLIENAGGFSSDGHKSVLDKTIINLDDRTQVAYGSKNEIIRFEETLYGTSRL 384
Query: 211 KGAVPVGAAA 182
K VP+G A
Sbjct: 385 KN-VPIGVTA 393
>sp|P46285|S17P_WHEAT Sedoheptulose-1,7-bisphosphatase, chloroplast precursor
(Sedoheptulose-bisphosphatase) (SBPASE) (SED(1,7)P2ASE)
gi|100803|pir||S23452 sedoheptulose-bisphosphatase (EC
3.1.3.37) precursor - wheat gi|14265|emb|CAA46507.1|
sedoheptulose-1,7-bisphosphatase [Triticum aestivum]
Length = 393
Score = 214 bits (545), Expect = 6e-55
Identities = 108/130 (83%), Positives = 118/130 (90%)
Frame = -1
Query: 571 NLRATSDNPNYAKLIDYYVNEKYTLRYTGGMVPDVNQIIVKEKGIFTNVSSPSAKAKLRL 392
NLRAT DNP+Y KL++YYV EKYTLRYTGGMVPDVNQIIVKEKGIFTNV+SP+AKAKLRL
Sbjct: 264 NLRATFDNPDYDKLVNYYVKEKYTLRYTGGMVPDVNQIIVKEKGIFTNVTSPTAKAKLRL 323
Query: 391 LFEVAPLGFLIEKAGGYSSDGHKSVLDIVIDNIDDRTQVAYGSKNEIIRFEETLYGSSRL 212
LFEVAPLGFLIEKAGG+SSDG +SVLD VI +D+RTQVAYGSKNEIIRFEETLYGSSRL
Sbjct: 324 LFEVAPLGFLIEKAGGHSSDGKQSVLDKVISVLDERTQVAYGSKNEIIRFEETLYGSSRL 383
Query: 211 KGAVPVGAAA 182
+ VGA A
Sbjct: 384 AASATVGATA 393
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 471,754,145
Number of Sequences: 1393205
Number of extensions: 9523759
Number of successful extensions: 23328
Number of sequences better than 10.0: 181
Number of HSP's better than 10.0 without gapping: 22740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23296
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20956655091
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
