Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005272A_C01 KMC005272A_c01
(524 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM65973.1| lipase/hydrolase, putative [Arabidopsis thaliana] 219 1e-56
ref|NP_174259.1| lipase/hydrolase, putative; protein id: At1g296... 219 1e-56
gb|AAM63021.1| GDSL-motif lipase/hydrolase-like protein [Arabido... 218 3e-56
ref|NP_199379.1| GDSL-motif lipase/hydrolase-like protein; prote... 218 3e-56
pir||T05034 hypothetical protein F13C5.140 - Arabidopsis thalian... 216 2e-55
>gb|AAM65973.1| lipase/hydrolase, putative [Arabidopsis thaliana]
Length = 364
Score = 219 bits (559), Expect = 1e-56
Identities = 112/157 (71%), Positives = 132/157 (83%)
Frame = +3
Query: 54 IMKWIVMNLVAVVMVVFLGLWSTTRVGADPQVPCYFIFGDSLVDNGNNNQLNSLAKANYL 233
+ KW +++ V V+ LGL +V A+PQVPCYFIFGDSLVDNGNNN+L S+A+A+Y
Sbjct: 5 LRKWCLVS----VWVLLLGLGF--KVKAEPQVPCYFIFGDSLVDNGNNNRLRSIARADYF 58
Query: 234 PYGIDFGGGPTGRFSNGKTTVDVVAELLGFDSYIPPYSTARGQDILKGVNYASAAAGIRE 413
PYGIDFGG PTGRFSNG+TTVDV+ ELLGFD+YIP YST GQ+IL+GVNYASAAAGIRE
Sbjct: 59 PYGIDFGG-PTGRFSNGRTTVDVLTELLGFDNYIPAYSTVSGQEILQGVNYASAAAGIRE 117
Query: 414 ETGQQLGGRISFSGQVENYQRTVSQVVNLLGDENTAA 524
ETG QLG RI+FSGQVENY+ TV+QVV +LGDE TAA
Sbjct: 118 ETGAQLGQRITFSGQVENYKNTVAQVVEILGDEYTAA 154
>ref|NP_174259.1| lipase/hydrolase, putative; protein id: At1g29660.1, supported by
cDNA: 6680., supported by cDNA: gi_15215767 [Arabidopsis
thaliana] gi|25336246|pir||H86419 probable
lipase/hydrolase, 114382-116051 [imported] - Arabidopsis
thaliana gi|12323544|gb|AAG51756.1|AC068667_35
lipase/hydrolase, putative; 114382-116051 [Arabidopsis
thaliana] gi|15215768|gb|AAK91429.1| At1g29660/F15D2_21
[Arabidopsis thaliana] gi|22137090|gb|AAM91390.1|
At1g29660/F15D2_21 [Arabidopsis thaliana]
Length = 364
Score = 219 bits (559), Expect = 1e-56
Identities = 112/157 (71%), Positives = 132/157 (83%)
Frame = +3
Query: 54 IMKWIVMNLVAVVMVVFLGLWSTTRVGADPQVPCYFIFGDSLVDNGNNNQLNSLAKANYL 233
+ KW +++ V V+ LGL +V A+PQVPCYFIFGDSLVDNGNNN+L S+A+A+Y
Sbjct: 5 LRKWCLVS----VWVLLLGLGF--KVKAEPQVPCYFIFGDSLVDNGNNNRLRSIARADYF 58
Query: 234 PYGIDFGGGPTGRFSNGKTTVDVVAELLGFDSYIPPYSTARGQDILKGVNYASAAAGIRE 413
PYGIDFGG PTGRFSNG+TTVDV+ ELLGFD+YIP YST GQ+IL+GVNYASAAAGIRE
Sbjct: 59 PYGIDFGG-PTGRFSNGRTTVDVLTELLGFDNYIPAYSTVSGQEILQGVNYASAAAGIRE 117
Query: 414 ETGQQLGGRISFSGQVENYQRTVSQVVNLLGDENTAA 524
ETG QLG RI+FSGQVENY+ TV+QVV +LGDE TAA
Sbjct: 118 ETGAQLGQRITFSGQVENYKNTVAQVVEILGDEYTAA 154
>gb|AAM63021.1| GDSL-motif lipase/hydrolase-like protein [Arabidopsis thaliana]
Length = 362
Score = 218 bits (555), Expect = 3e-56
Identities = 102/146 (69%), Positives = 124/146 (84%)
Frame = +3
Query: 87 VVMVVFLGLWSTTRVGADPQVPCYFIFGDSLVDNGNNNQLNSLAKANYLPYGIDFGGGPT 266
++M++ + + +DP PCYFIFGDSLVDNGNNNQL SLA+ANY PYGIDF GPT
Sbjct: 7 MIMMIMVAVTMINIAKSDPIAPCYFIFGDSLVDNGNNNQLQSLARANYFPYGIDFAAGPT 66
Query: 267 GRFSNGKTTVDVVAELLGFDSYIPPYSTARGQDILKGVNYASAAAGIREETGQQLGGRIS 446
GRFSNG TTVDV+A+LLGF+ YI PY++ARGQDIL+GVNYASAAAGIR+ETG+QLGGRI+
Sbjct: 67 GRFSNGLTTVDVIAQLLGFEDYITPYASARGQDILRGVNYASAAAGIRDETGRQLGGRIA 126
Query: 447 FSGQVENYQRTVSQVVNLLGDENTAA 524
F+GQV N+ TVSQVVN+LGD+N A+
Sbjct: 127 FAGQVANHVNTVSQVVNILGDQNEAS 152
>ref|NP_199379.1| GDSL-motif lipase/hydrolase-like protein; protein id: At5g45670.1,
supported by cDNA: 18389., supported by cDNA:
gi_17933311, supported by cDNA: gi_20453402 [Arabidopsis
thaliana] gi|9758670|dbj|BAB09209.1| GDSL-motif
lipase/hydrolase-like protein [Arabidopsis thaliana]
gi|17933312|gb|AAL48238.1|AF446366_1 AT5g45670/MRA19_6
[Arabidopsis thaliana] gi|20453403|gb|AAM19940.1|
AT5g45670/MRA19_6 [Arabidopsis thaliana]
Length = 362
Score = 218 bits (555), Expect = 3e-56
Identities = 102/146 (69%), Positives = 124/146 (84%)
Frame = +3
Query: 87 VVMVVFLGLWSTTRVGADPQVPCYFIFGDSLVDNGNNNQLNSLAKANYLPYGIDFGGGPT 266
++M++ + + +DP PCYFIFGDSLVDNGNNNQL SLA+ANY PYGIDF GPT
Sbjct: 7 MIMMIMVAVTMINIAKSDPIAPCYFIFGDSLVDNGNNNQLQSLARANYFPYGIDFAAGPT 66
Query: 267 GRFSNGKTTVDVVAELLGFDSYIPPYSTARGQDILKGVNYASAAAGIREETGQQLGGRIS 446
GRFSNG TTVDV+A+LLGF+ YI PY++ARGQDIL+GVNYASAAAGIR+ETG+QLGGRI+
Sbjct: 67 GRFSNGLTTVDVIAQLLGFEDYITPYASARGQDILRGVNYASAAAGIRDETGRQLGGRIA 126
Query: 447 FSGQVENYQRTVSQVVNLLGDENTAA 524
F+GQV N+ TVSQVVN+LGD+N A+
Sbjct: 127 FAGQVANHVNTVSQVVNILGDQNEAS 152
>pir||T05034 hypothetical protein F13C5.140 - Arabidopsis thaliana
gi|2832625|emb|CAA16754.1| putative protein [Arabidopsis
thaliana] gi|7268691|emb|CAB78899.1| putative protein
[Arabidopsis thaliana]
Length = 626
Score = 216 bits (549), Expect = 2e-55
Identities = 107/153 (69%), Positives = 122/153 (78%)
Frame = +3
Query: 66 IVMNLVAVVMVVFLGLWSTTRVGADPQVPCYFIFGDSLVDNGNNNQLNSLAKANYLPYGI 245
+ M V V+M+ + DP PCYFIFGDSLVD+GNNN+L SLA+ANY PYGI
Sbjct: 264 VEMARVCVMMMAMAIAMAMNIAMGDPIAPCYFIFGDSLVDSGNNNRLTSLARANYFPYGI 323
Query: 246 DFGGGPTGRFSNGKTTVDVVAELLGFDSYIPPYSTARGQDILKGVNYASAAAGIREETGQ 425
DF GPTGRFSNGKTTVDV+ ELLGFD YI PYS ARG+DIL+GVNYASAAAGIREETG+
Sbjct: 324 DFQYGPTGRFSNGKTTVDVITELLGFDDYITPYSEARGEDILRGVNYASAAAGIREETGR 383
Query: 426 QLGGRISFSGQVENYQRTVSQVVNLLGDENTAA 524
QLG RI+F+GQV N+ TVSQVVN+LGDEN AA
Sbjct: 384 QLGARITFAGQVANHVNTVSQVVNILGDENEAA 416
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 524,760,724
Number of Sequences: 1393205
Number of extensions: 12642236
Number of successful extensions: 42086
Number of sequences better than 10.0: 266
Number of HSP's better than 10.0 without gapping: 38864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41551
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17019769648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
