Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005269A_C01 KMC005269A_c01
(813 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T11578 probable lipoxygenase (EC 1.13.11.12) CPRD46, drough... 433 e-120
dbj|BAB84352.1| lipoxygenase [Citrus jambhiri] 424 e-118
pir||T07038 probable lipoxygenase (EC 1.13.11.12) Lox2 - tomato ... 419 e-116
emb|CAA05278.1| loxc homologue [Lycopersicon pimpinellifolium] 417 e-116
pir||T07408 lipoxygenase (EC 1.13.11.12) loxC, chloroplast - tom... 417 e-116
>pir||T11578 probable lipoxygenase (EC 1.13.11.12) CPRD46, drought-inducible -
cowpea gi|1853970|dbj|BAA13542.1| CPRD46 protein [Vigna
unguiculata]
Length = 899
Score = 433 bits (1113), Expect = e-120
Identities = 198/267 (74%), Positives = 226/267 (84%)
Frame = +2
Query: 2 LYVLDYHDFLLPFVEQVRQLEGTTLYGSRTLFVLTHDGTLRPLAIELTRPPMDGKPQWRE 181
L+VLDYHD LLP VE+VR++EGTTLYGSR LF LT DGTLRPLAIEL RPP+DGKPQW++
Sbjct: 464 LFVLDYHDLLLPLVEEVRKIEGTTLYGSRALFFLTRDGTLRPLAIELVRPPIDGKPQWKK 523
Query: 182 VYTPSWHSTSVWLWRLAKAHVLAHDSGYHQLVSHWLRTHCATEPYIIATNRQLSAMHPIY 361
V+ P+WHST VWLWRLAK HVLAHD+GYHQLVSHWLRTHCATEPYIIA NRQLSAMHPIY
Sbjct: 524 VFAPTWHSTGVWLWRLAKIHVLAHDTGYHQLVSHWLRTHCATEPYIIAANRQLSAMHPIY 583
Query: 362 RLLHPHFRYTMEINALAREALINANGVIENNFTPGNLSILLSSVAYDQHWQFNLQALPAD 541
RLLHPHFRYTMEINALARE+LINA G+IE FTP S+LLSS+AYD+HW+F+LQ+LP D
Sbjct: 584 RLLHPHFRYTMEINALARESLINAGGIIEQCFTPQKHSVLLSSIAYDKHWRFDLQSLPKD 643
Query: 542 LIHRGLAEEDPNAPHGLKLSIEDYPYANDGLILWDAIKSWVTDYVNHYYSEPEANTGPSL 721
LIHRGLA EDP APHGLKL+IEDYPYANDGL LW A KSW T+Y++HYY++ A
Sbjct: 644 LIHRGLAVEDPTAPHGLKLTIEDYPYANDGLDLWAAFKSWFTEYIDHYYADSNA------ 697
Query: 722 IESDQELQAWWEEIRTVAHVTKGRALW 802
++SD ELQAWW+E+ V H K W
Sbjct: 698 VQSDTELQAWWDEVINVGHADKKDEPW 724
>dbj|BAB84352.1| lipoxygenase [Citrus jambhiri]
Length = 895
Score = 424 bits (1090), Expect = e-118
Identities = 194/267 (72%), Positives = 226/267 (83%)
Frame = +2
Query: 2 LYVLDYHDFLLPFVEQVRQLEGTTLYGSRTLFVLTHDGTLRPLAIELTRPPMDGKPQWRE 181
L++LDYHD LP+VE+VRQL+ TTLYGSRT+F LT GTLRP+AIELTRPPM+GKPQW++
Sbjct: 460 LFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQ 519
Query: 182 VYTPSWHSTSVWLWRLAKAHVLAHDSGYHQLVSHWLRTHCATEPYIIATNRQLSAMHPIY 361
V+ PSWHST WLW+LAKAHVLAHD+GYHQLVSHWL THC TEPY+IATNRQLS MHPIY
Sbjct: 520 VFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLNTHCCTEPYVIATNRQLSVMHPIY 579
Query: 362 RLLHPHFRYTMEINALAREALINANGVIENNFTPGNLSILLSSVAYDQHWQFNLQALPAD 541
RLL PHFRYTMEIN LAR+AL+NA+G+IE++F+PG S+ SSVAYD+ W+F+ +ALP D
Sbjct: 580 RLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKD 639
Query: 542 LIHRGLAEEDPNAPHGLKLSIEDYPYANDGLILWDAIKSWVTDYVNHYYSEPEANTGPSL 721
LI RGLA EDP+APHGLKL+IEDYP+ANDGL LWDAIK WVTDYVNHYY + SL
Sbjct: 640 LISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPD------KSL 693
Query: 722 IESDQELQAWWEEIRTVAHVTKGRALW 802
+ESD+ELQAWW EIRTV H K W
Sbjct: 694 VESDEELQAWWTEIRTVGHGDKKDEPW 720
>pir||T07038 probable lipoxygenase (EC 1.13.11.12) Lox2 - tomato (fragment)
gi|2826844|emb|CAA05280.1| loxc homologue [Lycopersicon
esculentum]
Length = 442
Score = 419 bits (1078), Expect = e-116
Identities = 195/267 (73%), Positives = 227/267 (84%)
Frame = +2
Query: 2 LYVLDYHDFLLPFVEQVRQLEGTTLYGSRTLFVLTHDGTLRPLAIELTRPPMDGKPQWRE 181
L++LDYHD LLPFV +V +L+GT LYGSRTLF LT +GTLRPLAIELTRPP+D KPQW++
Sbjct: 7 LFILDYHDLLLPFVNKVNELKGTVLYGSRTLFYLTPNGTLRPLAIELTRPPVDDKPQWKQ 66
Query: 182 VYTPSWHSTSVWLWRLAKAHVLAHDSGYHQLVSHWLRTHCATEPYIIATNRQLSAMHPIY 361
VY P+W++T WLWR+AKAHVLAHDSGYHQLVSHWLRTHC TEPYIIA+NRQLSAMHPIY
Sbjct: 67 VYCPTWYATGAWLWRIAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIASNRQLSAMHPIY 126
Query: 362 RLLHPHFRYTMEINALAREALINANGVIENNFTPGNLSILLSSVAYDQHWQFNLQALPAD 541
RLL PHFRYTMEIN AREALINANGVIE++F+PG S+ LSSVAYD W+F+ +ALP D
Sbjct: 127 RLLFPHFRYTMEINGTAREALINANGVIESSFSPGKYSMELSSVAYDLEWRFDREALPED 186
Query: 542 LIHRGLAEEDPNAPHGLKLSIEDYPYANDGLILWDAIKSWVTDYVNHYYSEPEANTGPSL 721
LI RGLAEEDPNAP+GL+L+IEDYP+A+DGL+LWD +K WVT+YVNHYY P+AN L
Sbjct: 187 LISRGLAEEDPNAPYGLRLTIEDYPFASDGLVLWDILKQWVTNYVNHYY--PQAN----L 240
Query: 722 IESDQELQAWWEEIRTVAHVTKGRALW 802
IE D+ELQAWW EI+ V H K W
Sbjct: 241 IECDEELQAWWLEIKNVGHGDKKDEPW 267
>emb|CAA05278.1| loxc homologue [Lycopersicon pimpinellifolium]
Length = 786
Score = 417 bits (1073), Expect = e-116
Identities = 193/268 (72%), Positives = 227/268 (84%), Gaps = 1/268 (0%)
Frame = +2
Query: 2 LYVLDYHDFLLPFVEQVRQLEGTTLYGSRTLFVLTHDGTLRPLAIELTRPPMDGKPQWRE 181
L++LDYHD LLP+V +V +L+G+ LYGSRT+F LT GTL+PLAIELTRPP+D KPQW+E
Sbjct: 350 LFILDYHDLLLPYVNKVNELKGSVLYGSRTIFFLTPQGTLKPLAIELTRPPIDDKPQWKE 409
Query: 182 VYTPS-WHSTSVWLWRLAKAHVLAHDSGYHQLVSHWLRTHCATEPYIIATNRQLSAMHPI 358
VY+P+ W++T WLW+LAKAHVL+HDSGYHQLVSHWLRTHC TEPYIIATNRQLSAMHPI
Sbjct: 410 VYSPNDWNATGAWLWKLAKAHVLSHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPI 469
Query: 359 YRLLHPHFRYTMEINALAREALINANGVIENNFTPGNLSILLSSVAYDQHWQFNLQALPA 538
YRLLHPHFRYTMEINALAREALINANG+IE++F PG S+ LSS+AY W+F+ +ALP
Sbjct: 470 YRLLHPHFRYTMEINALAREALINANGIIESSFFPGKYSVELSSIAYGAEWRFDQEALPQ 529
Query: 539 DLIHRGLAEEDPNAPHGLKLSIEDYPYANDGLILWDAIKSWVTDYVNHYYSEPEANTGPS 718
+LI RGLAEEDPN PHGLKL+IEDYP+ANDGL+LWD +K WVT+YVNHYY P+ N
Sbjct: 530 NLISRGLAEEDPNEPHGLKLAIEDYPFANDGLVLWDILKQWVTNYVNHYY--PQTN---- 583
Query: 719 LIESDQELQAWWEEIRTVAHVTKGRALW 802
LIESD+ELQAWW EI+ V H K W
Sbjct: 584 LIESDKELQAWWSEIKNVGHGDKKDEPW 611
>pir||T07408 lipoxygenase (EC 1.13.11.12) loxC, chloroplast - tomato
gi|1654138|gb|AAB65766.1| lipoxygenase
Length = 896
Score = 417 bits (1072), Expect = e-116
Identities = 193/268 (72%), Positives = 227/268 (84%), Gaps = 1/268 (0%)
Frame = +2
Query: 2 LYVLDYHDFLLPFVEQVRQLEGTTLYGSRTLFVLTHDGTLRPLAIELTRPPMDGKPQWRE 181
L++LDYHD LLP+V +V +L+G+ LYGSRT+F LT GTL+PLAIELTRPP+D KPQW+E
Sbjct: 460 LFILDYHDLLLPYVNKVNELKGSVLYGSRTIFFLTPHGTLKPLAIELTRPPIDDKPQWKE 519
Query: 182 VYTPS-WHSTSVWLWRLAKAHVLAHDSGYHQLVSHWLRTHCATEPYIIATNRQLSAMHPI 358
VY+P+ W++T WLW+LAKAHVL+HDSGYHQLVSHWLRTHC TEPYIIATNRQLSAMHPI
Sbjct: 520 VYSPNNWNATGAWLWKLAKAHVLSHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPI 579
Query: 359 YRLLHPHFRYTMEINALAREALINANGVIENNFTPGNLSILLSSVAYDQHWQFNLQALPA 538
YRLLHPHFRYTMEINALAREALINANG+IE++F PG S+ LSS+AY W+F+ +ALP
Sbjct: 580 YRLLHPHFRYTMEINALAREALINANGIIESSFFPGKYSVELSSIAYGAEWRFDQEALPQ 639
Query: 539 DLIHRGLAEEDPNAPHGLKLSIEDYPYANDGLILWDAIKSWVTDYVNHYYSEPEANTGPS 718
+LI RGLAEEDPN PHGLKL+IEDYP+ANDGL+LWD +K WVT+YVNHYY P+ N
Sbjct: 640 NLISRGLAEEDPNEPHGLKLAIEDYPFANDGLVLWDILKQWVTNYVNHYY--PQTN---- 693
Query: 719 LIESDQELQAWWEEIRTVAHVTKGRALW 802
LIESD+ELQAWW EI+ V H K W
Sbjct: 694 LIESDKELQAWWSEIKNVGHGDKKDEPW 721
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 778,358,838
Number of Sequences: 1393205
Number of extensions: 18326597
Number of successful extensions: 46323
Number of sequences better than 10.0: 218
Number of HSP's better than 10.0 without gapping: 43626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45858
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 41736604858
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
