Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005215A_C01 KMC005215A_c01
(885 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB33036.1| CPRD49 [Vigna unguiculata] 119 8e-26
ref|NP_566387.1| expressed protein; protein id: At3g11210.1, sup... 81 2e-14
gb|AAM63310.1| CPRD49 [Arabidopsis thaliana] 81 2e-14
ref|NP_565883.1| expressed protein; protein id: At2g38180.1, sup... 57 3e-07
gb|AAL31218.1| At2g38180/F16M14.11 [Arabidopsis thaliana] 57 3e-07
>dbj|BAB33036.1| CPRD49 [Vigna unguiculata]
Length = 255
Score = 119 bits (297), Expect = 8e-26
Identities = 55/67 (82%), Positives = 61/67 (90%)
Frame = -1
Query: 885 LSAEGSKVVVKEILKVLREADWKPSLHWMSLPTEFAEDSPYYPPSADGTTTINVSYSIPR 706
LSAEGSKVVVKEIL+VLREADWK SLHWMS+PTE+AEDSPYYPP+ DGT TINVS+ + R
Sbjct: 189 LSAEGSKVVVKEILRVLREADWKTSLHWMSMPTEYAEDSPYYPPTPDGTKTINVSHIVSR 248
Query: 705 RNLQWDI 685
R LQWDI
Sbjct: 249 RCLQWDI 255
>ref|NP_566387.1| expressed protein; protein id: At3g11210.1, supported by cDNA:
21357. [Arabidopsis thaliana]
gi|6016678|gb|AAF01505.1|AC009991_1 unknown protein
[Arabidopsis thaliana]
gi|12321863|gb|AAG50959.1|AC073395_1 unknown protein;
50065-48267 [Arabidopsis thaliana]
Length = 256
Score = 81.3 bits (199), Expect = 2e-14
Identities = 39/66 (59%), Positives = 48/66 (72%)
Frame = -1
Query: 885 LSAEGSKVVVKEILKVLREADWKPSLHWMSLPTEFAEDSPYYPPSADGTTTINVSYSIPR 706
LSA+GSK+V EIL+V++EA+W PSLHW S+PTEFA+DSPY SADG T+N S
Sbjct: 191 LSAQGSKIVAGEILRVVKEAEWHPSLHWKSMPTEFADDSPYDLVSADGKQTVNSSEWTYF 250
Query: 705 RNLQWD 688
QWD
Sbjct: 251 WEEQWD 256
>gb|AAM63310.1| CPRD49 [Arabidopsis thaliana]
Length = 256
Score = 81.3 bits (199), Expect = 2e-14
Identities = 39/66 (59%), Positives = 48/66 (72%)
Frame = -1
Query: 885 LSAEGSKVVVKEILKVLREADWKPSLHWMSLPTEFAEDSPYYPPSADGTTTINVSYSIPR 706
LSA+GSK+V EIL+V++EA+W PSLHW S+PTEFA+DSPY SADG T+N S
Sbjct: 191 LSAQGSKIVAGEILRVVKEAEWHPSLHWKSMPTEFADDSPYDLVSADGKQTVNSSEWTYF 250
Query: 705 RNLQWD 688
QWD
Sbjct: 251 WEEQWD 256
>ref|NP_565883.1| expressed protein; protein id: At2g38180.1, supported by cDNA:
gi_16974630 [Arabidopsis thaliana]
gi|7485583|pir||T01250 hypothetical protein At2g38180
[imported] - Arabidopsis thaliana
gi|3335366|gb|AAC27167.1| expressed protein [Arabidopsis
thaliana]
Length = 312
Score = 57.4 bits (137), Expect = 3e-07
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = -1
Query: 882 SAEGSKVVVKEILKVLREADWKPSLHWMSLPTEFAED 772
+A+ S++VVKEILKVLR ADWKPSL+W SLP EF D
Sbjct: 190 TAKASEIVVKEILKVLRGADWKPSLYWKSLPVEFPFD 226
>gb|AAL31218.1| At2g38180/F16M14.11 [Arabidopsis thaliana]
Length = 312
Score = 57.4 bits (137), Expect = 3e-07
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = -1
Query: 882 SAEGSKVVVKEILKVLREADWKPSLHWMSLPTEFAED 772
+A+ S++VVKEILKVLR ADWKPSL+W SLP EF D
Sbjct: 190 TAKASEIVVKEILKVLRGADWKPSLYWKSLPVEFPFD 226
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 755,854,213
Number of Sequences: 1393205
Number of extensions: 17126339
Number of successful extensions: 54570
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 48655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53994
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 47939536764
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
