Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005209A_C01 KMC005209A_c01
(525 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG17438.1|AF294725_1 reversibly glycosylated polypeptide [Or... 171 2e-75
emb|CAA77235.1| reversibly glycosylated polypeptide [Oryza sativ... 171 3e-75
emb|CAC84517.1| UDP-Glucose:protein transglucosylase [Solanum tu... 167 4e-75
pir||T04331 golgi associated protein se-wap41 - maize gi|1895084... 169 4e-75
emb|CAA09469.1| RGP1 protein [Oryza sativa (japonica cultivar-gr... 170 5e-75
>gb|AAG17438.1|AF294725_1 reversibly glycosylated polypeptide [Oryza sativa]
gi|22795245|gb|AAN08217.1| reversibly glycosylated
polypeptide [Oryza sativa (japonica cultivar-group)]
Length = 364
Score = 171 bits (434), Expect(2) = 2e-75
Identities = 80/88 (90%), Positives = 82/88 (92%)
Frame = +3
Query: 48 ATTPSVPL*KDELDIAIPTIRNLDFLEMWRPFFQGYHLIIVQDGDPSKTINVPEGFDYEL 227
A+ PS PL KDELDI IPTIRNLDFLEMWRPFFQ YHLIIVQDGDP+KTI VPEGFDYEL
Sbjct: 10 ASVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKTIRVPEGFDYEL 69
Query: 228 YNRNDINRILGPKASCISFKDSACRCFG 311
YNRNDINRILGPKASCISFKDSACRCFG
Sbjct: 70 YNRNDINRILGPKASCISFKDSACRCFG 97
Score = 132 bits (333), Expect(2) = 2e-75
Identities = 63/69 (91%), Positives = 65/69 (93%)
Frame = +2
Query: 317 MVSKKKYVYTIDDDWLVAKDPSGKDINALEQHIKNLLTPSTPHFFNTLYDPYREGADCVR 496
MVSKKKYV+TIDDD VAKDPSGKDINALEQHIKNLL+PSTP FFNTLYDPYREGAD VR
Sbjct: 99 MVSKKKYVFTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVR 158
Query: 497 GYPFSLREG 523
GYPFSLREG
Sbjct: 159 GYPFSLREG 167
>emb|CAA77235.1| reversibly glycosylated polypeptide [Oryza sativa (indica
cultivar-group)]
Length = 364
Score = 171 bits (432), Expect(2) = 3e-75
Identities = 83/97 (85%), Positives = 86/97 (88%)
Frame = +3
Query: 21 SVLSESPSMATTPSVPL*KDELDIAIPTIRNLDFLEMWRPFFQGYHLIIVQDGDPSKTIN 200
+V SPS+ PS PL KDELDI IPTIRNLDFLEMWRPFFQ YHLIIVQDGDP+KTI
Sbjct: 4 TVTVPSPSV---PSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKTIR 60
Query: 201 VPEGFDYELYNRNDINRILGPKASCISFKDSACRCFG 311
VPEGFDYELYNRNDINRILGPKASCISFKDSACRCFG
Sbjct: 61 VPEGFDYELYNRNDINRILGPKASCISFKDSACRCFG 97
Score = 132 bits (333), Expect(2) = 3e-75
Identities = 63/69 (91%), Positives = 65/69 (93%)
Frame = +2
Query: 317 MVSKKKYVYTIDDDWLVAKDPSGKDINALEQHIKNLLTPSTPHFFNTLYDPYREGADCVR 496
MVSKKKYV+TIDDD VAKDPSGKDINALEQHIKNLL+PSTP FFNTLYDPYREGAD VR
Sbjct: 99 MVSKKKYVFTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVR 158
Query: 497 GYPFSLREG 523
GYPFSLREG
Sbjct: 159 GYPFSLREG 167
>emb|CAC84517.1| UDP-Glucose:protein transglucosylase [Solanum tuberosum]
Length = 366
Score = 167 bits (423), Expect(2) = 4e-75
Identities = 80/88 (90%), Positives = 82/88 (92%)
Frame = +3
Query: 48 ATTPSVPL*KDELDIAIPTIRNLDFLEMWRPFFQGYHLIIVQDGDPSKTINVPEGFDYEL 227
+ TP+ PL KDELDI IPTIRNLDFLEMWRPFFQ YHLIIVQDGDPSK INVPEGFDYEL
Sbjct: 5 SVTPT-PLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIINVPEGFDYEL 63
Query: 228 YNRNDINRILGPKASCISFKDSACRCFG 311
YNRNDINRILGPKASCISFKDSACRCFG
Sbjct: 64 YNRNDINRILGPKASCISFKDSACRCFG 91
Score = 135 bits (341), Expect(2) = 4e-75
Identities = 63/69 (91%), Positives = 65/69 (93%)
Frame = +2
Query: 317 MVSKKKYVYTIDDDWLVAKDPSGKDINALEQHIKNLLTPSTPHFFNTLYDPYREGADCVR 496
MVSKKKY+YTIDDD VAKDPSGKDINALEQHIKNLL PSTPHFFNTLYDPYREGAD VR
Sbjct: 93 MVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHFFNTLYDPYREGADFVR 152
Query: 497 GYPFSLREG 523
GYPFS+REG
Sbjct: 153 GYPFSMREG 161
>pir||T04331 golgi associated protein se-wap41 - maize gi|1895084|gb|AAB49896.1|
golgi associated protein se-wap41 [Zea mays]
Length = 364
Score = 169 bits (428), Expect(2) = 4e-75
Identities = 79/88 (89%), Positives = 82/88 (92%)
Frame = +3
Query: 48 ATTPSVPL*KDELDIAIPTIRNLDFLEMWRPFFQGYHLIIVQDGDPSKTINVPEGFDYEL 227
++TPS PL KDELDI IPTIRNLDFLEMWR FFQ YHLIIVQDGDP+KTI VPEGFDYEL
Sbjct: 10 SSTPSTPLLKDELDIVIPTIRNLDFLEMWRAFFQPYHLIIVQDGDPTKTIKVPEGFDYEL 69
Query: 228 YNRNDINRILGPKASCISFKDSACRCFG 311
YNRNDINRILGPKASCISFKDSACRCFG
Sbjct: 70 YNRNDINRILGPKASCISFKDSACRCFG 97
Score = 134 bits (336), Expect(2) = 4e-75
Identities = 63/69 (91%), Positives = 65/69 (93%)
Frame = +2
Query: 317 MVSKKKYVYTIDDDWLVAKDPSGKDINALEQHIKNLLTPSTPHFFNTLYDPYREGADCVR 496
MVSKKKY+YTIDDD VAKDPSGKDINALEQHIKNLL+PSTP FFNTLYDPYREGAD VR
Sbjct: 99 MVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVR 158
Query: 497 GYPFSLREG 523
GYPFSLREG
Sbjct: 159 GYPFSLREG 167
>emb|CAA09469.1| RGP1 protein [Oryza sativa (japonica cultivar-group)]
Length = 349
Score = 170 bits (430), Expect(2) = 5e-75
Identities = 79/88 (89%), Positives = 81/88 (91%)
Frame = +3
Query: 48 ATTPSVPL*KDELDIAIPTIRNLDFLEMWRPFFQGYHLIIVQDGDPSKTINVPEGFDYEL 227
A+ PS PL KDELDI IPTIRNLDFLEMWRPFFQ YHLIIVQDGDP+KTI VPEGFDYEL
Sbjct: 10 ASVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKTIRVPEGFDYEL 69
Query: 228 YNRNDINRILGPKASCISFKDSACRCFG 311
YNRNDINRILGPK SCISFKDSACRCFG
Sbjct: 70 YNRNDINRILGPKGSCISFKDSACRCFG 97
Score = 132 bits (333), Expect(2) = 5e-75
Identities = 63/69 (91%), Positives = 65/69 (93%)
Frame = +2
Query: 317 MVSKKKYVYTIDDDWLVAKDPSGKDINALEQHIKNLLTPSTPHFFNTLYDPYREGADCVR 496
MVSKKKYV+TIDDD VAKDPSGKDINALEQHIKNLL+PSTP FFNTLYDPYREGAD VR
Sbjct: 99 MVSKKKYVFTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVR 158
Query: 497 GYPFSLREG 523
GYPFSLREG
Sbjct: 159 GYPFSLREG 167
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 499,952,946
Number of Sequences: 1393205
Number of extensions: 11416307
Number of successful extensions: 44800
Number of sequences better than 10.0: 165
Number of HSP's better than 10.0 without gapping: 40898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44313
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17019769648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
