Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005207A_C01 KMC005207A_c01
(503 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC54830.1| vacuolar processing enzyme-3 [Nicotiana tabacum] 179 2e-44
dbj|BAC54828.1| vacuolar processing enzyme-1b [Nicotiana tabacum] 178 3e-44
dbj|BAC54827.1| vacuolar processing enzyme-1a [Nicotiana tabacum] 178 3e-44
gb|AAM60827.1| vacuolar processing enzyme/asparaginyl endopeptid... 177 6e-44
ref|NP_188656.1| vacuolar processing enzyme/asparaginyl endopept... 177 6e-44
>dbj|BAC54830.1| vacuolar processing enzyme-3 [Nicotiana tabacum]
Length = 481
Score = 179 bits (453), Expect = 2e-44
Identities = 84/121 (69%), Positives = 100/121 (82%)
Frame = +2
Query: 140 DHQSSTEGKRWAWLVAGSNEFYNYRHQADICHAYQILKKGGLPDENIIVFMYDDIAYNKE 319
D + G RWA L+AGSN ++NYRHQAD+CHAYQ+L+KGGL DENII+FMYDDIAYN+E
Sbjct: 37 DEADDSVGTRWAVLLAGSNGYWNYRHQADVCHAYQLLRKGGLKDENIIMFMYDDIAYNEE 96
Query: 320 NTWPGKIFNSPNGPNVYEGVPKDYTGDAVSVENFLAVLSGNESATTGGSGKVSDSGPDDI 499
N G I NSP G +VY+GVPKDYTGD V+V+NFLAVL GN++A TGGSGKV DSGP+D
Sbjct: 97 NPRQGVIINSPAGEDVYKGVPKDYTGDDVNVDNFLAVLLGNKTALTGGSGKVVDSGPNDH 156
Query: 500 I 502
I
Sbjct: 157 I 157
>dbj|BAC54828.1| vacuolar processing enzyme-1b [Nicotiana tabacum]
Length = 489
Score = 178 bits (452), Expect = 3e-44
Identities = 83/122 (68%), Positives = 101/122 (82%)
Frame = +2
Query: 137 GDHQSSTEGKRWAWLVAGSNEFYNYRHQADICHAYQILKKGGLPDENIIVFMYDDIAYNK 316
GDH + G RWA L+AGSN ++NYRHQADICHAYQ+LKKGGL DENI+VFMYDDIA N+
Sbjct: 45 GDHDDDSVGTRWAILLAGSNGYWNYRHQADICHAYQLLKKGGLKDENIVVFMYDDIANNE 104
Query: 317 ENTWPGKIFNSPNGPNVYEGVPKDYTGDAVSVENFLAVLSGNESATTGGSGKVSDSGPDD 496
EN G I NSP+G +VY+GVPKDYTGD V+V+NF AV+ GN++A +GGSGKV +SGP+D
Sbjct: 105 ENPRRGVIINSPHGEDVYKGVPKDYTGDDVTVDNFFAVILGNKTALSGGSGKVVNSGPND 164
Query: 497 II 502
I
Sbjct: 165 HI 166
>dbj|BAC54827.1| vacuolar processing enzyme-1a [Nicotiana tabacum]
Length = 490
Score = 178 bits (452), Expect = 3e-44
Identities = 84/124 (67%), Positives = 100/124 (79%)
Frame = +2
Query: 131 VTGDHQSSTEGKRWAWLVAGSNEFYNYRHQADICHAYQILKKGGLPDENIIVFMYDDIAY 310
V DH + G RWA L+AGSN ++NYRHQADICHAYQ+LKKGGL DENI+VFMYDDIA
Sbjct: 44 VGDDHDDDSVGTRWAILLAGSNGYWNYRHQADICHAYQLLKKGGLKDENIVVFMYDDIAN 103
Query: 311 NKENTWPGKIFNSPNGPNVYEGVPKDYTGDAVSVENFLAVLSGNESATTGGSGKVSDSGP 490
N+EN PG I NSP+G +VY+GVPKDYTGD V+V NF A L GN++A +GGSGKV +SGP
Sbjct: 104 NEENPRPGVIINSPHGEDVYKGVPKDYTGDDVTVNNFFAALLGNKTALSGGSGKVVNSGP 163
Query: 491 DDII 502
+D I
Sbjct: 164 NDHI 167
>gb|AAM60827.1| vacuolar processing enzyme/asparaginyl endopeptidase, putative
[Arabidopsis thaliana]
Length = 466
Score = 177 bits (449), Expect = 6e-44
Identities = 84/117 (71%), Positives = 97/117 (82%)
Frame = +2
Query: 152 STEGKRWAWLVAGSNEFYNYRHQADICHAYQILKKGGLPDENIIVFMYDDIAYNKENTWP 331
S +G RWA LVAGSNE+YNYRHQADICHAYQIL+KGGL DENIIVFMYDDIA++ EN P
Sbjct: 41 SAKGTRWAVLVAGSNEYYNYRHQADICHAYQILRKGGLKDENIIVFMYDDIAFSSENPRP 100
Query: 332 GKIFNSPNGPNVYEGVPKDYTGDAVSVENFLAVLSGNESATTGGSGKVSDSGPDDII 502
G I N P+G +VY+GVPKDYT +AV+V+NF VL GNES TGG+GKV SGP+D I
Sbjct: 101 GVIINKPDGEDVYKGVPKDYTKEAVNVQNFYNVLLGNESGVTGGNGKVVKSGPNDNI 157
>ref|NP_188656.1| vacuolar processing enzyme/asparaginyl endopeptidase, putative;
protein id: At3g20210.1, supported by cDNA: 100372.
[Arabidopsis thaliana] gi|9293977|dbj|BAB01880.1|
vacuolar processing enzyme (proteinase) [Arabidopsis
thaliana] gi|21539541|gb|AAM53323.1| vacuolar processing
enzyme/asparaginyl endopeptidase, putative [Arabidopsis
thaliana] gi|24030374|gb|AAN41349.1| putative vacuolar
processing enzyme/asparaginyl endopeptidase [Arabidopsis
thaliana] gi|24850433|gb|AAN64910.1| vacuolar processing
enzyme delta preproprotein [Arabidopsis thaliana]
gi|28881887|dbj|BAC65233.1| delta-vacuolar processing
enzyme [Arabidopsis thaliana]
Length = 466
Score = 177 bits (449), Expect = 6e-44
Identities = 84/117 (71%), Positives = 97/117 (82%)
Frame = +2
Query: 152 STEGKRWAWLVAGSNEFYNYRHQADICHAYQILKKGGLPDENIIVFMYDDIAYNKENTWP 331
S +G RWA LVAGSNE+YNYRHQADICHAYQIL+KGGL DENIIVFMYDDIA++ EN P
Sbjct: 41 SAKGTRWAVLVAGSNEYYNYRHQADICHAYQILRKGGLKDENIIVFMYDDIAFSSENPRP 100
Query: 332 GKIFNSPNGPNVYEGVPKDYTGDAVSVENFLAVLSGNESATTGGSGKVSDSGPDDII 502
G I N P+G +VY+GVPKDYT +AV+V+NF VL GNES TGG+GKV SGP+D I
Sbjct: 101 GVIINKPDGEDVYKGVPKDYTKEAVNVQNFYNVLLGNESGVTGGNGKVVKSGPNDNI 157
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 478,157,717
Number of Sequences: 1393205
Number of extensions: 11010360
Number of successful extensions: 28273
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 27507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28233
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15362785481
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
