Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005200A_C01 KMC005200A_c01
(509 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_201080.1| putative protein; protein id: At5g62740.1, supp... 153 1e-36
gb|AAN17463.1| hypersensitive-induced reaction protein 2 [Hordeu... 151 5e-36
gb|AAN17455.2| hypersensitive-induced reaction protein 2 [Hordeu... 151 5e-36
gb|AAK15503.1|AF325721_1 hypersensitivity-induced response-like ... 150 1e-35
gb|AAF68391.1|AF236375_1 hypersensitive-induced response protein... 150 1e-35
>ref|NP_201080.1| putative protein; protein id: At5g62740.1, supported by cDNA:
2641., supported by cDNA: gi_17065547 [Arabidopsis
thaliana] gi|10177452|dbj|BAB10843.1|
hypersensitive-induced response protein [Arabidopsis
thaliana] gi|17065548|gb|AAL32928.1|
hypersensitive-induced response protein [Arabidopsis
thaliana] gi|21386975|gb|AAM47891.1|
hypersensitive-induced response protein [Arabidopsis
thaliana] gi|21554781|gb|AAM63689.1|
hypersensitive-induced response protein [Arabidopsis
thaliana]
Length = 286
Score = 153 bits (386), Expect = 1e-36
Identities = 77/83 (92%), Positives = 81/83 (96%)
Frame = -3
Query: 504 GVGIARQRQAIVDGLRDSVLGFSGNVPGTTAKDVLDMVLVTQYFDTMKEIGATSKSSAVF 325
G+GIARQRQAIVDGLRDSVLGF+ NVPGTTAKDV+DMVLVTQYFDTMKEIGA+SKSSAVF
Sbjct: 200 GLGIARQRQAIVDGLRDSVLGFAVNVPGTTAKDVMDMVLVTQYFDTMKEIGASSKSSAVF 259
Query: 324 IPHGPGAVRDVASQIRDGLLQAS 256
IPHGPGAVRDVASQIRDGLLQ S
Sbjct: 260 IPHGPGAVRDVASQIRDGLLQGS 282
>gb|AAN17463.1| hypersensitive-induced reaction protein 2 [Hordeum vulgare subsp.
vulgare]
Length = 105
Score = 151 bits (381), Expect = 5e-36
Identities = 75/83 (90%), Positives = 81/83 (97%)
Frame = -3
Query: 504 GVGIARQRQAIVDGLRDSVLGFSGNVPGTTAKDVLDMVLVTQYFDTMKEIGATSKSSAVF 325
GVGIARQRQAIVDGLRDSVL FS NVPGTTAKD++DMVLVTQYFDTMKEIGA+SKSS+VF
Sbjct: 21 GVGIARQRQAIVDGLRDSVLAFSENVPGTTAKDIMDMVLVTQYFDTMKEIGASSKSSSVF 80
Query: 324 IPHGPGAVRDVASQIRDGLLQAS 256
IPHGPGAV+DVASQIRDGLLQA+
Sbjct: 81 IPHGPGAVKDVASQIRDGLLQAN 103
>gb|AAN17455.2| hypersensitive-induced reaction protein 2 [Hordeum vulgare subsp.
vulgare]
Length = 284
Score = 151 bits (381), Expect = 5e-36
Identities = 75/83 (90%), Positives = 81/83 (97%)
Frame = -3
Query: 504 GVGIARQRQAIVDGLRDSVLGFSGNVPGTTAKDVLDMVLVTQYFDTMKEIGATSKSSAVF 325
GVGIARQRQAIVDGLRDSVL FS NVPGTTAKD++DMVLVTQYFDTMKEIGA+SKSS+VF
Sbjct: 200 GVGIARQRQAIVDGLRDSVLAFSENVPGTTAKDIMDMVLVTQYFDTMKEIGASSKSSSVF 259
Query: 324 IPHGPGAVRDVASQIRDGLLQAS 256
IPHGPGAV+DVASQIRDGLLQA+
Sbjct: 260 IPHGPGAVKDVASQIRDGLLQAN 282
>gb|AAK15503.1|AF325721_1 hypersensitivity-induced response-like protein [Pennisetum ciliare]
Length = 283
Score = 150 bits (378), Expect = 1e-35
Identities = 74/83 (89%), Positives = 81/83 (97%)
Frame = -3
Query: 504 GVGIARQRQAIVDGLRDSVLGFSGNVPGTTAKDVLDMVLVTQYFDTMKEIGATSKSSAVF 325
GVGIARQRQAIVDGLRDSVL FS NVPGTTAKD++DMVLVTQYFDTMKEIGA+SKSS+VF
Sbjct: 200 GVGIARQRQAIVDGLRDSVLAFSENVPGTTAKDIMDMVLVTQYFDTMKEIGASSKSSSVF 259
Query: 324 IPHGPGAVRDVASQIRDGLLQAS 256
IPHGPGAV+DVA+QIRDGLLQA+
Sbjct: 260 IPHGPGAVKDVAAQIRDGLLQAN 282
>gb|AAF68391.1|AF236375_1 hypersensitive-induced response protein [Zea mays]
Length = 287
Score = 150 bits (378), Expect = 1e-35
Identities = 73/83 (87%), Positives = 81/83 (96%)
Frame = -3
Query: 504 GVGIARQRQAIVDGLRDSVLGFSGNVPGTTAKDVLDMVLVTQYFDTMKEIGATSKSSAVF 325
G+GIARQRQAIVDGLRDSVLGFS NVPGTTAKDV+DMVL+TQYFDTMKEIGA+SK+S+VF
Sbjct: 200 GLGIARQRQAIVDGLRDSVLGFSVNVPGTTAKDVMDMVLITQYFDTMKEIGASSKASSVF 259
Query: 324 IPHGPGAVRDVASQIRDGLLQAS 256
IPHGPGAVRD+A+QIRDGLLQ S
Sbjct: 260 IPHGPGAVRDIATQIRDGLLQGS 282
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 462,428,183
Number of Sequences: 1393205
Number of extensions: 10184326
Number of successful extensions: 26996
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 26153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26941
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15942513235
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
