Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005198A_C02 KMC005198A_c02
(1068 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM64739.1| unknown [Arabidopsis thaliana] 187 1e-47
ref|NP_196996.1| putative protein; protein id: At5g14920.1, supp... 187 2e-47
sp|Q03211|EXLP_TOBAC PISTIL-SPECIFIC EXTENSIN-LIKE PROTEIN PRECU... 126 7e-28
dbj|BAB02467.1| contains similarity to late embryogenesis abunda... 121 2e-26
ref|NP_188574.1| putative late embryogenesis abundant protein; p... 121 2e-26
>gb|AAM64739.1| unknown [Arabidopsis thaliana]
Length = 275
Score = 187 bits (475), Expect(2) = 1e-47
Identities = 96/197 (48%), Positives = 112/197 (56%), Gaps = 16/197 (8%)
Frame = -3
Query: 1066 PSVPAPPSPVRPPT-PSTPAVTVPTPPLVKAPT--PPPQPPVKAPSPPIVKSPPYVPPPV 896
P+ P P +PP P T +VT PP+ P PP QPP P P VK P PP
Sbjct: 65 PTTPIKPPTTKPPVKPPTTSVTPVKPPVSTPPIKLPPVQPPTYKPPTPTVKPPSVQPPTY 124
Query: 895 KAPSPSIVKSP---PVKAPTPPIVKSPPSYPPPVKAPSPPIVKSPPVKAPTPPQVKTPPP 725
K P+P+ VK P PVK PT P V+SPP PP K P+ P VK P P P TPP
Sbjct: 125 KPPTPT-VKPPTTSPVKPPTTPPVQSPPVQPPTYKPPTSP-VKPPTTTPPVKPPTTTPPV 182
Query: 724 HPPVVKPPVAPI----------PSTPIVKSMKDCIPLCNYRCQLHSRKNMCTRACMTCCD 575
PP PP P+ P+ P V++ DC+PLC RC HSRKN+C RAC+TCC
Sbjct: 183 QPPTYNPPTTPVKPPTAPPVKPPTPPPVRTRIDCVPLCGTRCGQHSRKNVCMRACVTCCY 242
Query: 574 RCKCVPPGTYGNREKCG 524
RCKCVPPGTYGN+EKCG
Sbjct: 243 RCKCVPPGTYGNKEKCG 259
Score = 73.9 bits (180), Expect = 4e-12
Identities = 46/122 (37%), Positives = 58/122 (46%), Gaps = 4/122 (3%)
Frame = -3
Query: 1021 STPAVTVPTP-PLVKAPTPPPQPPVKAPSPPIVKSPPYVPPPVKAPSPSIVKSPPVKAPT 845
S P T+P+P P K P+P +PP + PP + + P PP K PPVK PT
Sbjct: 32 SLPTPTLPSPSPATKPPSPALKPPTPSYKPPTLPTTPIKPPTTK---------PPVKPPT 82
Query: 844 PPIVK-SPPSYPPPVKAPSPPIVKSPPVKAPTPPQVKTPPPHPPVVKPPVAPI--PSTPI 674
+ PP PP+K P P+ PP P P VK P PP KPP + P+T
Sbjct: 83 TSVTPVKPPVSTPPIKLP--PV--QPPTYKPPTPTVKPPSVQPPTYKPPTPTVKPPTTSP 138
Query: 673 VK 668
VK
Sbjct: 139 VK 140
Score = 50.8 bits (120), Expect = 4e-05
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Frame = -3
Query: 898 VKAPSPSIVKSPPVKAPTPPIVKSP-PSYPPPVKAPSPPIVKSPPVKAPT-PPQVKTPPP 725
V P+P++ P P P +K P PSY PP +P +K P K P PP P
Sbjct: 31 VSLPTPTLPSPSPATKPPSPALKPPTPSYKPPTLPTTP--IKPPTTKPPVKPPTTSVTPV 88
Query: 724 HPPVVKPPV--API------PSTPIVK 668
PPV PP+ P+ P TP VK
Sbjct: 89 KPPVSTPPIKLPPVQPPTYKPPTPTVK 115
Score = 25.8 bits (55), Expect(2) = 1e-47
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 519 CYTDMLTHGNKYKCP 475
CY +M T G K KCP
Sbjct: 261 CYANMKTRGGKSKCP 275
>ref|NP_196996.1| putative protein; protein id: At5g14920.1, supported by cDNA: 32599.,
supported by cDNA: gi_13926279, supported by cDNA:
gi_15010789, supported by cDNA: gi_15810064, supported by
cDNA: gi_16323239 [Arabidopsis thaliana]
gi|11357726|pir||T51437 hypothetical protein F2G14_40 -
Arabidopsis thaliana gi|9755659|emb|CAC01811.1| putative
protein [Arabidopsis thaliana]
gi|13926280|gb|AAK49610.1|AF372894_1 AT5g14920/F2G14_40
[Arabidopsis thaliana] gi|15010790|gb|AAK74054.1|
AT5g14920/F2G14_40 [Arabidopsis thaliana]
gi|15810065|gb|AAL06958.1| AT5g14920/F2G14_40
[Arabidopsis thaliana] gi|16323240|gb|AAL15354.1|
AT5g14920/F2G14_40 [Arabidopsis thaliana]
Length = 275
Score = 187 bits (474), Expect(2) = 2e-47
Identities = 99/214 (46%), Positives = 117/214 (54%), Gaps = 38/214 (17%)
Frame = -3
Query: 1051 PPSP-VRPPTPSTPAVTVPT----PPLVKAPTPPPQPPVKAPSPPI----VKSPPYVPPP 899
PPSP ++PPTPS T+PT PP K P PP PV PP+ +K PP PP
Sbjct: 47 PPSPALKPPTPSYKPPTLPTTPIKPPTTKPPVKPPTIPVTPVKPPVSTPPIKLPPVQPPT 106
Query: 898 VKAPSPSI----------------VKSP---PVKAPTPPIVKSPPSYPPPVKAPSPPIVK 776
K P+P++ VK P PVK PT P V+SPP PP K P+ P VK
Sbjct: 107 YKPPTPTVKPPSVQPPTYKPPTPTVKPPTTSPVKPPTTPPVQSPPVQPPTYKPPTSP-VK 165
Query: 775 SPPVKAPTPPQVKTPPPHPPVVKPPVAPI----------PSTPIVKSMKDCIPLCNYRCQ 626
P P P TPP PP PP P+ P+ P V++ DC+PLC RC
Sbjct: 166 PPTTTPPVKPPTTTPPVQPPTYNPPTTPVKPPTAPPVKPPTPPPVRTRIDCVPLCGTRCG 225
Query: 625 LHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCG 524
HSRKN+C RAC+TCC RCKCVPPGTYGN+EKCG
Sbjct: 226 QHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCG 259
Score = 76.3 bits (186), Expect = 8e-13
Identities = 47/122 (38%), Positives = 59/122 (47%), Gaps = 4/122 (3%)
Frame = -3
Query: 1021 STPAVTVPTP-PLVKAPTPPPQPPVKAPSPPIVKSPPYVPPPVKAPSPSIVKSPPVKAPT 845
S P T+P+P P K P+P +PP + PP + + P PP K PPVK PT
Sbjct: 32 SLPTPTLPSPSPATKPPSPALKPPTPSYKPPTLPTTPIKPPTTK---------PPVKPPT 82
Query: 844 PPIVK-SPPSYPPPVKAPSPPIVKSPPVKAPTPPQVKTPPPHPPVVKPPVAPI--PSTPI 674
P+ PP PP+K P P+ PP P P VK P PP KPP + P+T
Sbjct: 83 IPVTPVKPPVSTPPIKLP--PV--QPPTYKPPTPTVKPPSVQPPTYKPPTPTVKPPTTSP 138
Query: 673 VK 668
VK
Sbjct: 139 VK 140
Score = 51.6 bits (122), Expect = 2e-05
Identities = 32/87 (36%), Positives = 41/87 (46%), Gaps = 10/87 (11%)
Frame = -3
Query: 898 VKAPSPSIVKSPPVKAPTPPIVKSP-PSYPPPVKAPSPPIVKSPPVKAPT-PPQVKTPPP 725
V P+P++ P P P +K P PSY PP +P +K P K P PP + P
Sbjct: 31 VSLPTPTLPSPSPATKPPSPALKPPTPSYKPPTLPTTP--IKPPTTKPPVKPPTIPVTPV 88
Query: 724 HPPVVKPPV--API------PSTPIVK 668
PPV PP+ P+ P TP VK
Sbjct: 89 KPPVSTPPIKLPPVQPPTYKPPTPTVK 115
Score = 25.8 bits (55), Expect(2) = 2e-47
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 519 CYTDMLTHGNKYKCP 475
CY +M T G K KCP
Sbjct: 261 CYANMKTRGGKSKCP 275
>sp|Q03211|EXLP_TOBAC PISTIL-SPECIFIC EXTENSIN-LIKE PROTEIN PRECURSOR (PELP)
gi|322761|pir||JQ1696 pistil extensin-like protein
precursor (clone pMG15) - common tobacco
gi|19929|emb|CAA78397.1| pistil extensin like protein
[Nicotiana tabacum]
Length = 426
Score = 126 bits (316), Expect = 7e-28
Identities = 70/149 (46%), Positives = 77/149 (50%), Gaps = 14/149 (9%)
Frame = -3
Query: 1057 PAPPSPVRPPTPSTPAVTVPTPPLVKAPTPPPQPP-VKAPSPPIVKSPPYVPPPVKAPSP 881
P PPSP +P P A P PP K P+PPP PP VKAPSP K PP PPPVKAPSP
Sbjct: 150 PPPPSPCKPSPPDQSAKQPPQPPPAKQPSPPPPPPPVKAPSPSPAKQPPPPPPPVKAPSP 209
Query: 880 SIVKSPPVKAPTPP--------IVKSPPSYPPPVKAPSPPIVKSPPVKAPTPPQVKTPP- 728
S PP K P PP + PP PPV PSP PP+ AP P PP
Sbjct: 210 SPATQPPTKQPPPPPRAKKSPLLPPPPPVAYPPVMTPSPSPAAEPPIIAPFPSPPANPPL 269
Query: 727 ----PHPPVVKPPVAPIPSTPIVKSMKDC 653
P PPVVK P+ P+ PIV + C
Sbjct: 270 IPRRPAPPVVK-PLPPLGKPPIVSGLVYC 297
Score = 110 bits (275), Expect = 4e-23
Identities = 67/138 (48%), Positives = 74/138 (53%), Gaps = 10/138 (7%)
Frame = -3
Query: 1066 PSVPAPPS-----PVRPPTPSTPAVTVPTPPLVKAPTPPPQPPVKAPSPPIVKSPPYVPP 902
P++P P PV P PS+P+ PLVK P PPP P +P K PP PP
Sbjct: 120 PNLPDVPPIGGGPPVNQPKPSSPS------PLVKPPPPPPSPCKPSPPDQSAKQPPQ-PP 172
Query: 901 PVKAPSPSIVKSPPVKAPTPPIVKSPPSYPPPVKAPSPPIVKSPPVKAPTPP--QVKTP- 731
P K PSP PPVKAP+P K PP PPPVKAPSP PP K P PP K+P
Sbjct: 173 PAKQPSPP-PPPPPVKAPSPSPAKQPPPPPPPVKAPSPSPATQPPTKQPPPPPRAKKSPL 231
Query: 730 -PPHPPVVKPPV-APIPS 683
PP PPV PPV P PS
Sbjct: 232 LPPPPPVAYPPVMTPSPS 249
Score = 110 bits (275), Expect = 4e-23
Identities = 65/135 (48%), Positives = 73/135 (53%), Gaps = 8/135 (5%)
Frame = -3
Query: 1057 PAPPSPVRPPTPSTPAVTVPTPPLVKAPTPPPQPPVKAPSPPIVKSPPYVPPPVKAPSPS 878
P+ PSP+ P P P+ P+PP A PP PP K PSPP PP PPPVKAPSPS
Sbjct: 139 PSSPSPLVKPPPPPPSPCKPSPPDQSAKQPPQPPPAKQPSPP----PP--PPPVKAPSPS 192
Query: 877 IVKSPPVKAPTPPIVKSP---PSYPPPVKAPSPP--IVKSPPVKAPTP---PQVKTPPPH 722
K PP P PP VK+P P+ PP K P PP KSP + P P P V TP P
Sbjct: 193 PAKQPP---PPPPPVKAPSPSPATQPPTKQPPPPPRAKKSPLLPPPPPVAYPPVMTPSPS 249
Query: 721 PPVVKPPVAPIPSTP 677
P P +AP PS P
Sbjct: 250 PAAEPPIIAPFPSPP 264
Score = 86.7 bits (213), Expect = 6e-16
Identities = 64/175 (36%), Positives = 71/175 (40%), Gaps = 48/175 (27%)
Frame = -3
Query: 1060 VPAPPSPVRPPTPSTPAVTVPTPPLVKAPTPPPQPPVKAPSPPIVKSPPYVP-------- 905
+P PSP PT P P PL P P P PP +PSPP + P +P
Sbjct: 47 LPDIPSPFDGPTFVLP----PPSPLPSPPPPSPSPPPPSPSPPPPSTIPLIPPFTGGFLP 102
Query: 904 -----------------------------PPVKAPSPSIVKSPPVKAPTPP--------- 839
PPV P PS SP VK P PP
Sbjct: 103 PLPGSKLPDFAGLLPLIPNLPDVPPIGGGPPVNQPKPS-SPSPLVKPPPPPPSPCKPSPP 161
Query: 838 --IVKSPPSYPPPVKAPSPPIVKSPPVKAPTPPQVKTPPPHPPVVKPPVAPIPST 680
K PP PPP K PSPP PPVKAP+P K PPP PP VK P +P P+T
Sbjct: 162 DQSAKQPPQ-PPPAKQPSPP-PPPPPVKAPSPSPAKQPPPPPPPVKAP-SPSPAT 213
Score = 85.9 bits (211), Expect = 1e-15
Identities = 62/157 (39%), Positives = 68/157 (42%), Gaps = 27/157 (17%)
Frame = -3
Query: 1057 PAPPSPVRPPTPSTPAVTVPT----PPLVKAPTP---------------PP---QPPVKA 944
P PPSP PP + P + T PPL + P PP PPV
Sbjct: 77 PPPPSPSPPPPSTIPLIPPFTGGFLPPLPGSKLPDFAGLLPLIPNLPDVPPIGGGPPVNQ 136
Query: 943 PSP----PIVKSPPYVPPPVK-APSPSIVKSPPVKAPTPPIVKSPPSYPPPVKAPSPPIV 779
P P P+VK PP P P K +P K PP P P SPP PPPVKAPSP
Sbjct: 137 PKPSSPSPLVKPPPPPPSPCKPSPPDQSAKQPP--QPPPAKQPSPPPPPPPVKAPSPSPA 194
Query: 778 KSPPVKAPTPPQVKTPPPHPPVVKPPVAPIPSTPIVK 668
K PP P PP VK P P P +PP P P K
Sbjct: 195 KQPP---PPPPPVKAPSP-SPATQPPTKQPPPPPRAK 227
Score = 45.1 bits (105), Expect = 0.002
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Frame = -3
Query: 916 PYVPPPVKAPSPSIVKSPPVKAPTPPIVKSPPSYPPPVKAPSPPIVKSPPVKAPTPPQVK 737
P+ PP + P P I P P V PPS P PSP SPP +P+PP
Sbjct: 37 PFDWPPAEIPLPDI----PSPFDGPTFVLPPPSPLPSPPPPSP----SPPPPSPSPPPPS 88
Query: 736 TPPPHPPVVKPPVAPIPST---------PIVKSMKDCIPL 644
T P PP + P+P + P++ ++ D P+
Sbjct: 89 TIPLIPPFTGGFLPPLPGSKLPDFAGLLPLIPNLPDVPPI 128
Score = 37.7 bits (86), Expect = 0.31
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = -3
Query: 862 PVKAPTPPIVKSPPSYPPPVKAPSPPIVKSPPVKAPTPPQVKTPPPHPPVVKPPVAPIPS 683
P+ PP P P P P+ + P+ +P PP PPP P PP + IP
Sbjct: 35 PLPFDWPPAEIPLPDIPSPFDGPTFVLPPPSPLPSPPPPSPSPPPPSPS--PPPPSTIPL 92
Query: 682 TP 677
P
Sbjct: 93 IP 94
>dbj|BAB02467.1| contains similarity to late embryogenesis abundant
protein~gene_id:MLD14.16 [Arabidopsis thaliana]
Length = 631
Score = 121 bits (304), Expect = 2e-26
Identities = 66/147 (44%), Positives = 80/147 (53%), Gaps = 7/147 (4%)
Frame = -3
Query: 1066 PSVPAPPSPVRPPTPS-TPAVTVPTPPLVKAPTPPPQPPVKAPSPPIVKSPPYVPPPVKA 890
PSVP+P PV PP P+ TP+V PTPP V P P P P V +P+PP+ PP P V +
Sbjct: 160 PSVPSPTPPVSPPPPTPTPSVPSPTPP-VSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPS 218
Query: 889 PSPSIVKSPP-----VKAPTPPIVKSPPSYPPPVKAPSPPIVKSPPVKAPTPPQVKTPPP 725
P+P + PP V +PTPP+ P PPP +P PP +P P+PP V PP
Sbjct: 219 PTPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPPPVSPPPP---TPTPSVPSPPDVTPTPP 275
Query: 724 HPPVVKPP-VAPIPSTPIVKSMKDCIP 647
P V PP V P P TP V S D P
Sbjct: 276 TPSVPSPPDVTPTPPTPSVPSPPDVTP 302
Score = 115 bits (289), Expect = 9e-25
Identities = 81/205 (39%), Positives = 95/205 (45%), Gaps = 32/205 (15%)
Frame = -3
Query: 1066 PSVPAPPSPVRPPTPS-TPAVTVPTPPL----------VKAPTPP-------PQPPVKAP 941
PSVP+P PV PP P+ TP+V PTPP+ V +PTPP P P V +P
Sbjct: 178 PSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSP 237
Query: 940 SPPIVKSP-PYVPPPVKAPSPS---IVKSPPVKAPTPPI--VKSPPSY---PPPVKAPSP 788
+PP+ P P PPPV P P+ V SPP PTPP V SPP PP PSP
Sbjct: 238 TPPVPTDPMPSPPPPVSPPPPTPTPSVPSPPDVTPTPPTPSVPSPPDVTPTPPTPSVPSP 297
Query: 787 PIVKSPPVKAPTPPQVKTPPPHPPVVKPP-----VAPIPSTPIVKSMKDCIPLCNYRCQL 623
P V P PTPP V TP PP V PP A K C + Y C
Sbjct: 298 PDVTPTP---PTPPSVPTPSGSPPYVPPPSDEEEAAGAKRVRCKKQRSPCYGV-EYTCPA 353
Query: 622 HSRKNMCTRACMTCCDRCKCVPPGT 548
++ C C+TC C C PG+
Sbjct: 354 DCPRS-CQVDCVTCKPVCNCDKPGS 377
Score = 113 bits (283), Expect = 4e-24
Identities = 61/146 (41%), Positives = 74/146 (49%), Gaps = 6/146 (4%)
Frame = -3
Query: 1066 PSVPAPPSPVRPPTPSTPAVTVPTPPLVKAPTPPPQPPVKAPSPPIVKSPPYVPPPVKAP 887
P P PP PPTPS P+ PTPP V P P P P V +P+PP+ PP P V +P
Sbjct: 146 PPAPVPPVSPPPPTPSVPS---PTPP-VSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSP 201
Query: 886 SPSIVKSPP-----VKAPTPPIVKSPPSYPPPVKAPSPPIVKSPPVKAPTPPQVKTPPPH 722
+P + PP V +PTPP+ PP+ P V +P+PP+ P P P P P
Sbjct: 202 TPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPPPVSPPPPTPT 261
Query: 721 PPVVKPP-VAPIPSTPIVKSMKDCIP 647
P V PP V P P TP V S D P
Sbjct: 262 PSVPSPPDVTPTPPTPSVPSPPDVTP 287
Score = 72.0 bits (175), Expect = 1e-11
Identities = 40/91 (43%), Positives = 50/91 (53%), Gaps = 9/91 (9%)
Frame = -3
Query: 922 SPPYVPPPVKAPSPSIVKSPPVKAPTPPIVKSPPSYPPPVKAPSPPIVKSPP-----VKA 758
+PP PPV P P+ P V +PTPP+ PP+ P V +P+PP+ PP V +
Sbjct: 145 TPPAPVPPVSPPPPT----PSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPS 200
Query: 757 PTPPQVKTPPPHP----PVVKPPVAPIPSTP 677
PTPP V PPP P P PPV+P P TP
Sbjct: 201 PTPP-VSPPPPTPTPSVPSPTPPVSPPPPTP 230
>ref|NP_188574.1| putative late embryogenesis abundant protein; protein id: At3g19430.1
[Arabidopsis thaliana]
Length = 550
Score = 121 bits (304), Expect = 2e-26
Identities = 66/147 (44%), Positives = 80/147 (53%), Gaps = 7/147 (4%)
Frame = -3
Query: 1066 PSVPAPPSPVRPPTPS-TPAVTVPTPPLVKAPTPPPQPPVKAPSPPIVKSPPYVPPPVKA 890
PSVP+P PV PP P+ TP+V PTPP V P P P P V +P+PP+ PP P V +
Sbjct: 88 PSVPSPTPPVSPPPPTPTPSVPSPTPP-VSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPS 146
Query: 889 PSPSIVKSPP-----VKAPTPPIVKSPPSYPPPVKAPSPPIVKSPPVKAPTPPQVKTPPP 725
P+P + PP V +PTPP+ P PPP +P PP +P P+PP V PP
Sbjct: 147 PTPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPPPVSPPPP---TPTPSVPSPPDVTPTPP 203
Query: 724 HPPVVKPP-VAPIPSTPIVKSMKDCIP 647
P V PP V P P TP V S D P
Sbjct: 204 TPSVPSPPDVTPTPPTPSVPSPPDVTP 230
Score = 115 bits (289), Expect = 9e-25
Identities = 81/205 (39%), Positives = 95/205 (45%), Gaps = 32/205 (15%)
Frame = -3
Query: 1066 PSVPAPPSPVRPPTPS-TPAVTVPTPPL----------VKAPTPP-------PQPPVKAP 941
PSVP+P PV PP P+ TP+V PTPP+ V +PTPP P P V +P
Sbjct: 106 PSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSP 165
Query: 940 SPPIVKSP-PYVPPPVKAPSPS---IVKSPPVKAPTPPI--VKSPPSY---PPPVKAPSP 788
+PP+ P P PPPV P P+ V SPP PTPP V SPP PP PSP
Sbjct: 166 TPPVPTDPMPSPPPPVSPPPPTPTPSVPSPPDVTPTPPTPSVPSPPDVTPTPPTPSVPSP 225
Query: 787 PIVKSPPVKAPTPPQVKTPPPHPPVVKPP-----VAPIPSTPIVKSMKDCIPLCNYRCQL 623
P V P PTPP V TP PP V PP A K C + Y C
Sbjct: 226 PDVTPTP---PTPPSVPTPSGSPPYVPPPSDEEEAAGAKRVRCKKQRSPCYGV-EYTCPA 281
Query: 622 HSRKNMCTRACMTCCDRCKCVPPGT 548
++ C C+TC C C PG+
Sbjct: 282 DCPRS-CQVDCVTCKPVCNCDKPGS 305
Score = 113 bits (283), Expect = 4e-24
Identities = 61/146 (41%), Positives = 74/146 (49%), Gaps = 6/146 (4%)
Frame = -3
Query: 1066 PSVPAPPSPVRPPTPSTPAVTVPTPPLVKAPTPPPQPPVKAPSPPIVKSPPYVPPPVKAP 887
P P PP PPTPS P+ PTPP V P P P P V +P+PP+ PP P V +P
Sbjct: 74 PPAPVPPVSPPPPTPSVPS---PTPP-VSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSP 129
Query: 886 SPSIVKSPP-----VKAPTPPIVKSPPSYPPPVKAPSPPIVKSPPVKAPTPPQVKTPPPH 722
+P + PP V +PTPP+ PP+ P V +P+PP+ P P P P P
Sbjct: 130 TPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPPPVSPPPPTPT 189
Query: 721 PPVVKPP-VAPIPSTPIVKSMKDCIP 647
P V PP V P P TP V S D P
Sbjct: 190 PSVPSPPDVTPTPPTPSVPSPPDVTP 215
Score = 72.0 bits (175), Expect = 1e-11
Identities = 40/91 (43%), Positives = 50/91 (53%), Gaps = 9/91 (9%)
Frame = -3
Query: 922 SPPYVPPPVKAPSPSIVKSPPVKAPTPPIVKSPPSYPPPVKAPSPPIVKSPP-----VKA 758
+PP PPV P P+ P V +PTPP+ PP+ P V +P+PP+ PP V +
Sbjct: 73 TPPAPVPPVSPPPPT----PSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPS 128
Query: 757 PTPPQVKTPPPHP----PVVKPPVAPIPSTP 677
PTPP V PPP P P PPV+P P TP
Sbjct: 129 PTPP-VSPPPPTPTPSVPSPTPPVSPPPPTP 158
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,043,446,714
Number of Sequences: 1393205
Number of extensions: 31263579
Number of successful extensions: 844088
Number of sequences better than 10.0: 17322
Number of HSP's better than 10.0 without gapping: 135961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386742
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 63740252037
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
