>KMC005194A_C02 KMC005194A_c02
agattaatatgcatcatttaatcattaataaaacagatggcggggattgggagtagctta
gcaagagttactttaGGAGTAAATATGAAAAGCGTCTTGAAACAGCGGGGTGATTCTGAT
TCCCTTGAAAAATGGTGGGTCATTCTACAAGCAATATAGTCTAAGATTCTCAGATAAATG
TTACAACAAAACAATACAACCAATGGGACAAAGAAGCCCACAACATACAAAGCACCCAGA
AACCATCTTTGGACTATTCTGGTGGGCGGTGGTTAACAATGTTGAACATTCAGCCTAGCC
TTGCCCATTCCCATGTTAAACAACAAGATGGTAGTGGTAGATGCTACAAAGCTCGTTTAA
GCAGATGAATGAGGAAGCTTGGTATACTCTGCCGAATAACCAATTGCGGAATGGAATCAA
TCTTGAAACAAGAAAAATTTACATTCTAATCTAAGAATGAAAAAAAAATTCAAGATAACA
TGAATTCGGAACTTACTTTTTCATGACCATTAGCTTGCTCAAAACACCAAAACCCCAGCA
GAAAATGGGTTnGGCAGATCTCATTTGAAAATTTGTAGATCAAAGAATATGACCTCCTTT
CA

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC005194A_C02 KMC005194A_c02
         (602 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_288730.1| putative oxidoreductase [Escherichia coli O157:...    32  8.3
sp|P25889|YEIA_ECOLI Hypothetical protein yeiA                         32  8.3

>ref|NP_288730.1| putative oxidoreductase [Escherichia coli O157:H7 EDL933]
           gi|15832293|ref|NP_311066.1| putative oxidoreductase
           [Escherichia coli O157:H7] gi|16130085|ref|NP_416652.1|
           putative oxidoreductase [Escherichia coli K12]
           gi|7467166|pir||B64983 yeiA protein - Escherichia coli
           (strain K-12) gi|25391113|pir||G91008 probable
           oxidoreductase ECs3039 [imported] - Escherichia coli
           (strain O157:H7, substrain RIMD 0509952)
           gi|25495637|pir||A85853 probable oxidoreductase yeiA
           [imported] - Escherichia coli  (strain O157:H7,
           substrain EDL933) gi|1788469|gb|AAC75208.1| putative
           oxidoreductase [Escherichia coli K12]
           gi|12516464|gb|AAG57285.1|AE005446_13 putative
           oxidoreductase [Escherichia coli O157:H7 EDL933]
           gi|13362508|dbj|BAB36462.1| putative oxidoreductase
           [Escherichia coli O157:H7]
          Length = 413

 Score = 31.6 bits (70), Expect = 8.3
 Identities = 17/35 (48%), Positives = 21/35 (59%)
 Frame = -3

Query: 291 ECSTLLTTAHQNSPKMVSGCFVCCGLLCPIGCIVL 187
           E S    T H N+ K V GC +C G +CP+GCI L
Sbjct: 365 EWSEKTRTPHCNTEKCV-GCLLC-GHVCPVGCIEL 397

>sp|P25889|YEIA_ECOLI Hypothetical protein yeiA
          Length = 411

 Score = 31.6 bits (70), Expect = 8.3
 Identities = 17/35 (48%), Positives = 21/35 (59%)
 Frame = -3

Query: 291 ECSTLLTTAHQNSPKMVSGCFVCCGLLCPIGCIVL 187
           E S    T H N+ K V GC +C G +CP+GCI L
Sbjct: 363 EWSEKTRTPHCNTEKCV-GCLLC-GHVCPVGCIEL 395

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 521,719,128
Number of Sequences: 1393205
Number of extensions: 11230240
Number of successful extensions: 22906
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22896
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MPD025f06_f AV771721 1 426 2 MPDL012c11_f AV777127 76 508 3 SPDL069b05_f BP056258 81 605

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