Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005187A_C01 KMC005187A_c01
(577 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC22500.1| resistant specific protein-2 [Vigna radiata] 96 2e-34
dbj|BAC22498.1| resistant specific protein-1(4) [Vigna radiata] ... 95 1e-33
dbj|BAC22501.1| resistant specific protein-3 [Vigna radiata] 95 1e-33
dbj|BAA92225.1| similar to the BURP domain [Vigna unguiculata] 82 8e-31
gb|AAL26909.1|AF319165_1 dehydration-responsive protein RD22 [Pr... 76 3e-29
>dbj|BAC22500.1| resistant specific protein-2 [Vigna radiata]
Length = 440
Score = 95.9 bits (237), Expect(2) = 2e-34
Identities = 44/77 (57%), Positives = 57/77 (73%)
Frame = -3
Query: 575 FITSKLGNDVHAMSTEVTKETKLLYLLVKDGVEKLADDYITVCHPMAYPYVVFWCH*LPK 396
F+TSKLGN+ STE+ E+K +VKDGV+ LA++ I CHPM+YPYVVF+CH +
Sbjct: 319 FVTSKLGNNARVTSTELEIESKFQKFIVKDGVKILAEEEIIACHPMSYPYVVFYCHKMSN 378
Query: 395 THAYFVPLEGEDGVRVK 345
+ A+ VPLEGEDG RVK
Sbjct: 379 STAHVVPLEGEDGTRVK 395
Score = 71.6 bits (174), Expect(2) = 2e-34
Identities = 28/44 (63%), Positives = 33/44 (74%)
Frame = -1
Query: 358 GLELNQIAVCHQDTSKWDPNHAAFPDLKVKPGTVPVCHFLPEGH 227
G + I +CH+DTS+WDP+H AF LKVKPGT PVCHF P GH
Sbjct: 391 GTRVKAIVICHKDTSQWDPDHVAFQVLKVKPGTSPVCHFFPNGH 434
>dbj|BAC22498.1| resistant specific protein-1(4) [Vigna radiata]
gi|24416616|dbj|BAC22499.1| resistant specific
protein-1(8) [Vigna radiata]
Length = 402
Score = 94.7 bits (234), Expect(2) = 1e-33
Identities = 43/77 (55%), Positives = 57/77 (73%)
Frame = -3
Query: 575 FITSKLGNDVHAMSTEVTKETKLLYLLVKDGVEKLADDYITVCHPMAYPYVVFWCH*LPK 396
F+TSKLGN+ STE+ +K +VKDGV+ LA++ I CHPM+YPYVVF+CH +
Sbjct: 281 FVTSKLGNNARVTSTELEIGSKFQKFIVKDGVKILAEEKIIACHPMSYPYVVFYCHKMAN 340
Query: 395 THAYFVPLEGEDGVRVK 345
+ A+F+PLEGEDG RVK
Sbjct: 341 STAHFLPLEGEDGTRVK 357
Score = 70.1 bits (170), Expect(2) = 1e-33
Identities = 27/44 (61%), Positives = 33/44 (74%)
Frame = -1
Query: 358 GLELNQIAVCHQDTSKWDPNHAAFPDLKVKPGTVPVCHFLPEGH 227
G + +A+CH+DTS+WDP+H AF LKVKPGT CHF PEGH
Sbjct: 353 GTRVKAVAICHKDTSQWDPHHVAFQVLKVKPGTSSACHFFPEGH 396
>dbj|BAC22501.1| resistant specific protein-3 [Vigna radiata]
Length = 275
Score = 94.7 bits (234), Expect(2) = 1e-33
Identities = 43/77 (55%), Positives = 57/77 (73%)
Frame = -3
Query: 575 FITSKLGNDVHAMSTEVTKETKLLYLLVKDGVEKLADDYITVCHPMAYPYVVFWCH*LPK 396
F+TSKLGN+ STE+ +K +VKDGV+ LA++ I CHPM+YPYVVF+CH +
Sbjct: 154 FVTSKLGNNARVTSTELEIGSKFQKFIVKDGVKILAEEKIIACHPMSYPYVVFYCHKMAN 213
Query: 395 THAYFVPLEGEDGVRVK 345
+ A+F+PLEGEDG RVK
Sbjct: 214 STAHFLPLEGEDGTRVK 230
Score = 70.1 bits (170), Expect(2) = 1e-33
Identities = 27/44 (61%), Positives = 33/44 (74%)
Frame = -1
Query: 358 GLELNQIAVCHQDTSKWDPNHAAFPDLKVKPGTVPVCHFLPEGH 227
G + +A+CH+DTS+WDP+H AF LKVKPGT CHF PEGH
Sbjct: 226 GTRVKAVAICHKDTSQWDPHHVAFQVLKVKPGTSSACHFFPEGH 269
>dbj|BAA92225.1| similar to the BURP domain [Vigna unguiculata]
Length = 132
Score = 81.6 bits (200), Expect(2) = 8e-31
Identities = 39/77 (50%), Positives = 50/77 (64%)
Frame = -3
Query: 575 FITSKLGNDVHAMSTEVTKETKLLYLLVKDGVEKLADDYITVCHPMAYPYVVFWCH*LPK 396
F TSKLG +V +STEV +ET L + GV+K++ D VCH +YPY VF+CH
Sbjct: 11 FSTSKLGKNVAVLSTEVDQETGLQQYTIAPGVKKVSGDNAVVCHKQSYPYAVFYCHKTET 70
Query: 395 THAYFVPLEGEDGVRVK 345
T Y VPLEG +G+RVK
Sbjct: 71 TRTYPVPLEGANGIRVK 87
Score = 73.9 bits (180), Expect(2) = 8e-31
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = -1
Query: 358 GLELNQIAVCHQDTSKWDPNHAAFPDLKVKPGTVPVCHFLPEGH 227
G+ + +AVCH DTS+W+P H AF LKVKPGTVPVCHFLPE H
Sbjct: 83 GIRVKAVAVCHTDTSQWNPKHLAFEVLKVKPGTVPVCHFLPEDH 126
>gb|AAL26909.1|AF319165_1 dehydration-responsive protein RD22 [Prunus persica]
Length = 349
Score = 75.9 bits (185), Expect(2) = 3e-29
Identities = 37/77 (48%), Positives = 45/77 (58%)
Frame = -3
Query: 575 FITSKLGNDVHAMSTEVTKETKLLYLLVKDGVEKLADDYITVCHPMAYPYVVFWCH*LPK 396
F TSKLG ++ A+STE K L + GV+KLA VCH YPY VF+CH
Sbjct: 225 FSTSKLGGNIQAISTEAEKGATLQKYTITPGVKKLAAGKSVVCHKQTYPYAVFYCHATKT 284
Query: 395 THAYFVPLEGEDGVRVK 345
T AY VPL+G DG+ K
Sbjct: 285 TRAYVVPLKGADGLEAK 301
Score = 74.3 bits (181), Expect(2) = 3e-29
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = -1
Query: 358 GLELNQIAVCHQDTSKWDPNHAAFPDLKVKPGTVPVCHFLPEGH 227
GLE +AVCH DTS+W+P H AF LKVKPGTVPVCHFLP+ H
Sbjct: 297 GLEAKAVAVCHTDTSEWNPKHLAFQVLKVKPGTVPVCHFLPKDH 340
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 541,231,364
Number of Sequences: 1393205
Number of extensions: 12158954
Number of successful extensions: 27833
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 26881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27818
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21530810025
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
