Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005180A_C01 KMC005180A_c01
(605 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T05735 cytochrome P450 71A10 - soybean gi|2738982|gb|AAB945... 119 2e-26
pir||T52256 cytochrome P-450LXXIA1 [similarity] - avocado gi|166... 107 9e-23
gb|AAO32822.1| cytochrome P450 71D1 [Catharanthus roseus] 102 4e-21
dbj|BAB40322.1| cytochrome P450 [Triticum aestivum] 100 1e-20
gb|AAM08841.1|AC113337_5 Putative cytochrome P450 [Oryza sativa ... 100 2e-20
>pir||T05735 cytochrome P450 71A10 - soybean gi|2738982|gb|AAB94584.1| CYP71A10
[Glycine max]
Length = 513
Score = 119 bits (299), Expect = 2e-26
Identities = 57/91 (62%), Positives = 70/91 (76%), Gaps = 4/91 (4%)
Frame = -3
Query: 600 FIPERFENSKVNFNGQDFQFIPFGSGRRKCPGVTFGLASTEYQLANLLCWFDWKLPTS-- 427
FIPERFE S+V+ NGQDFQ IPFG GRR CP ++FGLASTEY LANLL WF+W + S
Sbjct: 423 FIPERFETSQVDLNGQDFQLIPFGIGRRGCPAMSFGLASTEYVLANLLYWFNWNMSESGR 482
Query: 426 --VQDLDMSEKFGLNVNRKVPLYLEPIPYNS 340
+ ++DMSE GL V++KVPL+LEP PY +
Sbjct: 483 ILMHNIDMSETNGLTVSKKVPLHLEPEPYKT 513
>pir||T52256 cytochrome P-450LXXIA1 [similarity] - avocado
gi|166949|gb|AAA32913.1| cytochrome P-450LXXIA1
(cyp71A1)
Length = 502
Score = 107 bits (268), Expect = 9e-23
Identities = 49/82 (59%), Positives = 62/82 (74%), Gaps = 2/82 (2%)
Frame = -3
Query: 600 FIPERFENSKVNFNGQDFQFIPFGSGRRKCPGVTFGLASTEYQLANLLCWFDWKLPTSV- 424
F+PERF N+ V+F GQDFQ IPFG+GRR CPG+ FG++S E LANLL WF+W+LP +
Sbjct: 414 FLPERFVNNSVDFKGQDFQLIPFGAGRRGCPGIAFGISSVEISLANLLYWFNWELPGDLT 473
Query: 423 -QDLDMSEKFGLNVNRKVPLYL 361
+DLDMSE G+ V+ K PL L
Sbjct: 474 KEDLDMSEAVGITVHMKFPLQL 495
>gb|AAO32822.1| cytochrome P450 71D1 [Catharanthus roseus]
Length = 495
Score = 102 bits (254), Expect = 4e-21
Identities = 47/86 (54%), Positives = 62/86 (71%)
Frame = -3
Query: 600 FIPERFENSKVNFNGQDFQFIPFGSGRRKCPGVTFGLASTEYQLANLLCWFDWKLPTSVQ 421
FIPERFEN+ +F G +F+++PFGSGRR CPG+TFGLA+ + LA LL F+WKLP V
Sbjct: 407 FIPERFENTCFDFTGNNFEYLPFGSGRRMCPGMTFGLANVDLVLALLLYHFNWKLPPGVN 466
Query: 420 DLDMSEKFGLNVNRKVPLYLEPIPYN 343
D+DM+E+ GL +K L L P Y+
Sbjct: 467 DIDMTERVGLGATKKHSLVLIPTLYD 492
>dbj|BAB40322.1| cytochrome P450 [Triticum aestivum]
Length = 514
Score = 100 bits (249), Expect = 1e-20
Identities = 48/87 (55%), Positives = 61/87 (69%), Gaps = 2/87 (2%)
Frame = -3
Query: 600 FIPERFENSKVNFNGQDFQFIPFGSGRRKCPGVTFGLASTEYQLANLLCWFDWKLP--TS 427
F+PERFEN+ VN+ G F+FIPFG+GRR+CPG+ F + TE LANLL FDW LP +
Sbjct: 419 FMPERFENNNVNYKGTYFEFIPFGAGRRQCPGIQFSSSITEMALANLLYHFDWMLPDGAN 478
Query: 426 VQDLDMSEKFGLNVNRKVPLYLEPIPY 346
+ DMSEKFG V++K L L IP+
Sbjct: 479 LASFDMSEKFGFAVSKKYDLKLRAIPH 505
>gb|AAM08841.1|AC113337_5 Putative cytochrome P450 [Oryza sativa (japonica cultivar-group)]
Length = 479
Score = 100 bits (248), Expect = 2e-20
Identities = 49/87 (56%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = -3
Query: 600 FIPERFENSKVNFNGQDFQFIPFGSGRRKCPGVTFGLASTEYQLANLLCWFDWKLPTSV- 424
F PERFEN +F G DF+FIPFG+GRR CPG+ FGLA+ E LANLL +FDW LP V
Sbjct: 388 FKPERFENDARDFKGNDFEFIPFGAGRRMCPGMLFGLANIELALANLLFYFDWSLPDGVL 447
Query: 423 -QDLDMSEKFGLNVNRKVPLYLEPIPY 346
+LDM+E FG+ V +K L L Y
Sbjct: 448 PSELDMTENFGVTVRKKEDLLLHASLY 474
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 514,656,292
Number of Sequences: 1393205
Number of extensions: 10900775
Number of successful extensions: 27740
Number of sequences better than 10.0: 1262
Number of HSP's better than 10.0 without gapping: 26843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27558
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23997478008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
