Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005178A_C01 KMC005178A_c01
(506 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD37375.1|AF145349_1 peroxidase [Glycine max] 195 2e-58
gb|AAL93153.1|AF485267_1 gaiacol peroxidase [Gossypium hirsutum] 175 2e-50
ref|NP_194328.1| cationic peroxidase, putative; protein id: At4g... 177 1e-48
sp|Q9SZH2|PE43_ARATH Peroxidase 43 precursor (Atperox P43) 177 1e-48
ref|NP_177835.2| peroxidase, putative; protein id: At1g77100.1 [... 149 3e-40
>gb|AAD37375.1|AF145349_1 peroxidase [Glycine max]
Length = 341
Score = 195 bits (495), Expect(3) = 2e-58
Identities = 94/116 (81%), Positives = 105/116 (90%)
Frame = +3
Query: 75 ESIVQAVVRGAVVSDPNMAAVLLRLHFHDCLVEGCDGSILIENGDQSGKLAFGHQGVRGF 254
+SI++AVVR AV+SDPNMAAVLLRLHFHDC +GCDGSILIENG QS + AFGHQGVRGF
Sbjct: 53 DSIIRAVVRDAVLSDPNMAAVLLRLHFHDCFAQGCDGSILIENGPQSERHAFGHQGVRGF 112
Query: 255 EVIERAKAQLEASCPGVVSCADILALAATDSIVMGTGPEYQVPTGRRDGLVSNISL 422
EVIERAKAQLE SCPG+VSCADI+ALAA D++VM GP YQVPTGRRDGLVSN+SL
Sbjct: 113 EVIERAKAQLEGSCPGLVSCADIVALAARDAVVMANGPAYQVPTGRRDGLVSNLSL 168
Score = 40.4 bits (93), Expect(3) = 2e-58
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +1
Query: 424 ADDMPDVRDSIQPIKTKLLKKGLIDKD 504
ADDMPDV DSI+ +KTK L KGL KD
Sbjct: 169 ADDMPDVSDSIELLKTKFLNKGLTVKD 195
Score = 32.7 bits (73), Expect(3) = 2e-58
Identities = 14/19 (73%), Positives = 16/19 (83%)
Frame = +2
Query: 8 YLNVSSDGQLQVGFYSNTC 64
+L SS+ QLQVGFYSNTC
Sbjct: 31 FLMGSSESQLQVGFYSNTC 49
>gb|AAL93153.1|AF485267_1 gaiacol peroxidase [Gossypium hirsutum]
Length = 323
Score = 175 bits (443), Expect(3) = 2e-50
Identities = 86/118 (72%), Positives = 99/118 (83%)
Frame = +3
Query: 69 DAESIVQAVVRGAVVSDPNMAAVLLRLHFHDCLVEGCDGSILIENGDQSGKLAFGHQGVR 248
DAESIV +VVR A S N+ VLLRLHFHDC VEGCDGSILIENG ++ + AFGHQGV
Sbjct: 34 DAESIVSSVVRNAAQSISNIPPVLLRLHFHDCFVEGCDGSILIENGPKAERHAFGHQGVG 93
Query: 249 GFEVIERAKAQLEASCPGVVSCADILALAATDSIVMGTGPEYQVPTGRRDGLVSNISL 422
GFEVIE+AKAQLEA+CPGVVSCADI+ALAA D+I + GP Y+VPTGRRDG VS++SL
Sbjct: 94 GFEVIEQAKAQLEATCPGVVSCADIVALAARDAIALANGPSYEVPTGRRDGRVSDVSL 151
Score = 37.4 bits (85), Expect(3) = 2e-50
Identities = 17/27 (62%), Positives = 21/27 (76%)
Frame = +1
Query: 424 ADDMPDVRDSIQPIKTKLLKKGLIDKD 504
A +MPDV DSIQ +K K L+KGL +KD
Sbjct: 152 AANMPDVSDSIQQLKAKFLQKGLSEKD 178
Score = 28.9 bits (63), Expect(3) = 2e-50
Identities = 11/12 (91%), Positives = 12/12 (99%)
Frame = +2
Query: 29 GQLQVGFYSNTC 64
GQL+VGFYSNTC
Sbjct: 21 GQLRVGFYSNTC 32
>ref|NP_194328.1| cationic peroxidase, putative; protein id: At4g25980.1 [Arabidopsis
thaliana] gi|7433052|pir||T04253 peroxidase homolog
F20B18.90 - Arabidopsis thaliana
gi|4538927|emb|CAB39663.1| putative peroxidase
[Arabidopsis thaliana] gi|7269449|emb|CAB79453.1|
putative peroxidase [Arabidopsis thaliana]
Length = 371
Score = 177 bits (448), Expect(3) = 1e-48
Identities = 83/119 (69%), Positives = 100/119 (83%)
Frame = +3
Query: 72 AESIVQAVVRGAVVSDPNMAAVLLRLHFHDCLVEGCDGSILIENGDQSGKLAFGHQGVRG 251
AESIV+ VV GA +SDPN+ A+LLRLHFHDC VEGCDGSIL+ NG S K AFGH+GVRG
Sbjct: 83 AESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVNNGAISEKNAFGHEGVRG 142
Query: 252 FEVIERAKAQLEASCPGVVSCADILALAATDSIVMGTGPEYQVPTGRRDGLVSNISLCR 428
FE++E KA+LEA+CPGVVSC+DI+ALAA D+I + GP Y+VPTGRRDG VSN+SL +
Sbjct: 143 FEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLAK 201
Score = 33.5 bits (75), Expect(3) = 1e-48
Identities = 15/27 (55%), Positives = 20/27 (73%)
Frame = +1
Query: 424 ADDMPDVRDSIQPIKTKLLKKGLIDKD 504
A DMP+V DSI+ +K K ++KGL KD
Sbjct: 200 AKDMPEVSDSIEILKAKFMQKGLNAKD 226
Score = 25.0 bits (53), Expect(3) = 1e-48
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2
Query: 35 LQVGFYSNTC 64
L+VGFYSNTC
Sbjct: 71 LEVGFYSNTC 80
>sp|Q9SZH2|PE43_ARATH Peroxidase 43 precursor (Atperox P43)
Length = 326
Score = 177 bits (448), Expect(3) = 1e-48
Identities = 83/119 (69%), Positives = 100/119 (83%)
Frame = +3
Query: 72 AESIVQAVVRGAVVSDPNMAAVLLRLHFHDCLVEGCDGSILIENGDQSGKLAFGHQGVRG 251
AESIV+ VV GA +SDPN+ A+LLRLHFHDC VEGCDGSIL+ NG S K AFGH+GVRG
Sbjct: 38 AESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVNNGAISEKNAFGHEGVRG 97
Query: 252 FEVIERAKAQLEASCPGVVSCADILALAATDSIVMGTGPEYQVPTGRRDGLVSNISLCR 428
FE++E KA+LEA+CPGVVSC+DI+ALAA D+I + GP Y+VPTGRRDG VSN+SL +
Sbjct: 98 FEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLAK 156
Score = 33.5 bits (75), Expect(3) = 1e-48
Identities = 15/27 (55%), Positives = 20/27 (73%)
Frame = +1
Query: 424 ADDMPDVRDSIQPIKTKLLKKGLIDKD 504
A DMP+V DSI+ +K K ++KGL KD
Sbjct: 155 AKDMPEVSDSIEILKAKFMQKGLNAKD 181
Score = 25.0 bits (53), Expect(3) = 1e-48
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2
Query: 35 LQVGFYSNTC 64
L+VGFYSNTC
Sbjct: 26 LEVGFYSNTC 35
>ref|NP_177835.2| peroxidase, putative; protein id: At1g77100.1 [Arabidopsis
thaliana] gi|25285603|pir||H96799 probable peroxidase
[imported] - Arabidopsis thaliana
gi|2829914|gb|AAC00622.1| putative peroxidase
[Arabidopsis thaliana]
Length = 336
Score = 149 bits (375), Expect(3) = 3e-40
Identities = 74/116 (63%), Positives = 92/116 (78%), Gaps = 1/116 (0%)
Frame = +3
Query: 72 AESIVQAVVRGAVVSDPNMAAVLLRLHFHDCLVEGCDGSILIENG-DQSGKLAFGHQGVR 248
AESIV+ VV+ AV +DP AAVLLRL FHDC VEGCDGSILI++G + + A G+ GV
Sbjct: 53 AESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILIKHGGNDDERFAAGNAGVA 112
Query: 249 GFEVIERAKAQLEASCPGVVSCADILALAATDSIVMGTGPEYQVPTGRRDGLVSNI 416
GF+VI+ AK++LE CPGVVSCADI+ALAA D+I GP Y+VPTGRRDGL++N+
Sbjct: 113 GFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANV 168
Score = 33.5 bits (75), Expect(3) = 3e-40
Identities = 14/27 (51%), Positives = 21/27 (76%)
Frame = +1
Query: 424 ADDMPDVRDSIQPIKTKLLKKGLIDKD 504
A ++PDV+DSI +K+K +KGL D+D
Sbjct: 171 AKNLPDVQDSINTLKSKFREKGLSDQD 197
Score = 24.6 bits (52), Expect(3) = 3e-40
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 23 SDGQLQVGFYSNTC 64
S QLQ GFYS TC
Sbjct: 37 SAAQLQFGFYSETC 50
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 461,288,824
Number of Sequences: 1393205
Number of extensions: 10345729
Number of successful extensions: 32754
Number of sequences better than 10.0: 468
Number of HSP's better than 10.0 without gapping: 30389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32084
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15652649358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
