Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005174A_C01 KMC005174A_c01
(494 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD31716.1| putative ripening related protein [Cicer arietinum] 64 1e-20
gb|AAD50376.1|AF127110_1 ripening related protein [Glycine max] 57 1e-16
ref|NP_177243.1| major latex protein (MLP)-related; protein id: ... 42 5e-08
gb|AAK14060.1|AF239177_1 major latex-like protein [Prunus persica] 38 2e-05
emb|CAC43292.1| major latex like protein homolog [Beta vulgaris] 37 6e-05
>emb|CAD31716.1| putative ripening related protein [Cicer arietinum]
Length = 152
Score = 64.3 bits (155), Expect(2) = 1e-20
Identities = 31/53 (58%), Positives = 35/53 (65%)
Frame = -3
Query: 492 VDGKVITCLERVEAIDVQNQTNQYTLFGGDIDPHYQNFTLILQVIDNKDSHAA 334
+DGKV TC E VE +D QN+ Y LFGGDID HY+ F LILQV D D A
Sbjct: 62 IDGKVHTCNESVEEVDEQNKKITYKLFGGDIDEHYKVFKLILQVFDKSDGSGA 114
Score = 56.2 bits (134), Expect(2) = 1e-20
Identities = 22/37 (59%), Positives = 31/37 (83%)
Frame = -1
Query: 329 RWTIEYEKLHEDIEPPNGYMEYFNQLTRDVDNQIHKA 219
+WTIEYEK++EDI PPNG+M+Y ++ TRD+D + KA
Sbjct: 116 KWTIEYEKINEDIYPPNGWMDYLSKCTRDLDGNLVKA 152
>gb|AAD50376.1|AF127110_1 ripening related protein [Glycine max]
Length = 152
Score = 56.6 bits (135), Expect(2) = 1e-16
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = -3
Query: 492 VDGKVITCLERVEAIDVQNQTNQYTLFGGDIDPHYQNFTLILQVIDNKDSHA 337
+DGKV TC E +E++D +N+T Y LF GDID ++ F LI Q ID ++ A
Sbjct: 62 IDGKVTTCKESIESVDEENKTINYKLFDGDIDNQFKVFKLIFQAIDKENDSA 113
Score = 50.8 bits (120), Expect(2) = 1e-16
Identities = 18/39 (46%), Positives = 31/39 (79%)
Frame = -1
Query: 335 LARWTIEYEKLHEDIEPPNGYMEYFNQLTRDVDNQIHKA 219
+ +WTIEYE++ E+++PP GY+EY ++ T+D+D + KA
Sbjct: 114 IIKWTIEYERIGEEVDPPYGYIEYVHKCTKDIDAHLLKA 152
>ref|NP_177243.1| major latex protein (MLP)-related; protein id: At1g70870.1
[Arabidopsis thaliana]
Length = 139
Score = 42.0 bits (97), Expect(2) = 5e-08
Identities = 17/38 (44%), Positives = 27/38 (70%)
Frame = -1
Query: 335 LARWTIEYEKLHEDIEPPNGYMEYFNQLTRDVDNQIHK 222
+ARW+ EYEKL+ D PN YM++ LT+D+++ + K
Sbjct: 101 IARWSWEYEKLNADSPAPNKYMDFAVYLTKDIESNLLK 138
Score = 36.2 bits (82), Expect(2) = 5e-08
Identities = 21/45 (46%), Positives = 28/45 (61%)
Frame = -3
Query: 492 VDGKVITCLERVEAIDVQNQTNQYTLFGGDIDPHYQNFTLILQVI 358
VDGKV ERVE ID N++ +F GD+ +Y +FT LQ+I
Sbjct: 50 VDGKVEKMKERVE-IDEANKSMTVFVFEGDVMENYSSFTCNLQII 93
>gb|AAK14060.1|AF239177_1 major latex-like protein [Prunus persica]
Length = 156
Score = 38.1 bits (87), Expect(2) = 2e-05
Identities = 15/39 (38%), Positives = 25/39 (63%)
Frame = -1
Query: 335 LARWTIEYEKLHEDIEPPNGYMEYFNQLTRDVDNQIHKA 219
+ WT+EYEK H DIE P+ +++ +++DVD + A
Sbjct: 116 IVHWTMEYEKHHGDIEDPHTLLQFAVDVSKDVDAHLTSA 154
Score = 31.2 bits (69), Expect(2) = 2e-05
Identities = 13/41 (31%), Positives = 22/41 (52%)
Frame = -3
Query: 489 DGKVITCLERVEAIDVQNQTNQYTLFGGDIDPHYQNFTLIL 367
DGK E +EAID + + + GD+ HY++F + +
Sbjct: 64 DGKAKVAKELIEAIDAEKNLITFKVIEGDLLEHYKSFKITI 104
>emb|CAC43292.1| major latex like protein homolog [Beta vulgaris]
Length = 150
Score = 37.0 bits (84), Expect(2) = 6e-05
Identities = 16/45 (35%), Positives = 29/45 (63%)
Frame = -3
Query: 492 VDGKVITCLERVEAIDVQNQTNQYTLFGGDIDPHYQNFTLILQVI 358
+DGK E VEA+D + + ++ + GD+ +++FTL++QVI
Sbjct: 62 LDGKKCVAKELVEAVDEEKKMVRFKIIEGDLLKEFKSFTLVVQVI 106
Score = 30.4 bits (67), Expect(2) = 6e-05
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -1
Query: 329 RWTIEYEKLHEDIEPPNGYMEYFNQLTRDVD 237
RWT E+EK+H++ P +++ +T+D++
Sbjct: 115 RWTAEFEKVHDEGHYPTKLIDFCIAVTKDIE 145
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 429,788,799
Number of Sequences: 1393205
Number of extensions: 8695909
Number of successful extensions: 21084
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 20604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21069
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14493193850
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
